FFCP PHASE1:Mm9::chr13:23564854..23564865,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:23564854..23564865,+ | |||
|description=CAGE_peak_at_chr13:23564854..23564865,+ | |description=CAGE_peak_at_chr13:23564854..23564865,+ | ||
|id=chr13:23564854..23564865,+ | |id=chr13:23564854..23564865,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.56e-10!5;CL:0000417!5.56e-10!5;CL:0000668!5.56e-10!5;CL:0000412!5.56e-10!5;CL:0000182!5.56e-10!5;CL:0002319!4.33e-08!43;CL:0000221!8.21e-08!44;CL:0000133!8.21e-08!44;CL:0000055!2.02e-07!50;CL:0002321!2.74e-07!70;CL:0000220!2.74e-07!70;CL:0002092!3.57e-07!3;CL:0002540!3.57e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.28e-18,3;CL:0002540,4.28e-18,3;CL:0000878,2.61e-12,2;CL:0000129,2.61e-12,2;CL:0000182,8.12e-11,5;CL:0002320,6.27e-09,46;CL:0000134,6.27e-09,46;CL:0000219,1.95e-07,54;CL:0000723,2.31e-07,91;CL:0000048,2.31e-07,91;CL:0000034,8.44e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.84e-14!22;UBERON:0007499!3.84e-14!22;UBERON:0006925!3.84e-14!22;UBERON:0009497!3.84e-14!22;UBERON:0000015!3.84e-14!22;UBERON:0002423!3.84e-14!22;UBERON:0006235!3.84e-14!22;UBERON:0008835!3.84e-14!22;UBERON:0003894!3.84e-14!22;UBERON:0004161!3.84e-14!22;UBERON:0008836!3.84e-14!22;UBERON:0002365!6.39e-14!25;UBERON:0002330!6.39e-14!25;UBERON:0009854!2.31e-13!23;UBERON:0009856!2.31e-13!23;UBERON:0002240!3.79e-07!6;UBERON:0005174!3.79e-07!6;UBERON:0001137!3.79e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.41e-15,22;UBERON:0007499,6.41e-15,22;UBERON:0006925,6.41e-15,22;UBERON:0009497,6.41e-15,22;UBERON:0000015,6.41e-15,22;UBERON:0002423,6.41e-15,22;UBERON:0006235,6.41e-15,22;UBERON:0008835,6.41e-15,22;UBERON:0003894,6.41e-15,22;UBERON:0004161,6.41e-15,22;UBERON:0008836,6.41e-15,22;UBERON:0009854,3.09e-14,23;UBERON:0009856,3.09e-14,23;UBERON:0002365,4.95e-13,25;UBERON:0002330,4.95e-13,25;UBERON:0002384,6.27e-09,46;UBERON:0002371,6.29e-09,16;UBERON:0005256,7.45e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84934816232909,14.8329954385046,19.1829631035447,13.4820049733282,2.68952813725088,0,0,0,0.571301968807607,0.441737081903227,0,0,0,7.70811166995721,0.255374676170375,0,0,0,0,0.558365998002762,3.37657566019008,0.30559649555362,2.06240009831567,0.142371680799103,0,0.075726193333184,0,0.289864488701678,1.72084775396277,2.03991400112325,19.9690180905992,5.19821133958135,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.486405680325106,0.549122826376163,0,0,1.5601883655728,1.01031551178845,0.717589654087649,1.92977408545347,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84934816232909,14.8329954385046,19.1829631035447,13.4820049733282,2.68952813725088,0,0,0,0.571301968807607,0.441737081903227,0,0,0,7.70811166995721,0.255374676170375,0,0,0,0,0.558365998002762,3.37657566019008,0.30559649555362,2.06240009831567,0.142371680799103,0,0.075726193333184,0,0.289864488701678,1.72084775396277,2.03991400112325,19.9690180905992,5.19821133958135,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.486405680325106,0.549122826376163,0,0,1.5601883655728,1.01031551178845,0.717589654087649,1.92977408545347,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr13:23564854..23564865,+ | |short_description=p@chr13:23564854..23564865,+ | ||
}} | }} |
Latest revision as of 19:17, 5 August 2015
Short description: | p@chr13:23564854..23564865, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:23564854..23564865, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.28e-18 | 3 |
mesenchymal stem cell of the bone marrow | 4.28e-18 | 3 |
central nervous system macrophage | 2.61e-12 | 2 |
microglial cell | 2.61e-12 | 2 |
hepatocyte | 8.12e-11 | 5 |
connective tissue cell | 6.27e-09 | 46 |
mesenchymal cell | 6.27e-09 | 46 |
motile cell | 1.95e-07 | 54 |
somatic stem cell | 2.31e-07 | 91 |
multi fate stem cell | 2.31e-07 | 91 |
stem cell | 8.44e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
liver | 6.41e-15 | 22 |
epithelial sac | 6.41e-15 | 22 |
digestive gland | 6.41e-15 | 22 |
epithelium of foregut-midgut junction | 6.41e-15 | 22 |
anatomical boundary | 6.41e-15 | 22 |
hepatobiliary system | 6.41e-15 | 22 |
foregut-midgut junction | 6.41e-15 | 22 |
hepatic diverticulum | 6.41e-15 | 22 |
liver primordium | 6.41e-15 | 22 |
septum transversum | 6.41e-15 | 22 |
liver bud | 6.41e-15 | 22 |
digestive tract diverticulum | 3.09e-14 | 23 |
sac | 3.09e-14 | 23 |
exocrine gland | 4.95e-13 | 25 |
exocrine system | 4.95e-13 | 25 |
connective tissue | 6.27e-09 | 46 |
bone marrow | 6.29e-09 | 16 |
trunk mesenchyme | 7.45e-07 | 45 |