FFCP PHASE1:Mm9::chr6:70385497..70385502,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:70385497..70385502,- to FFCP PHASE1:Mm9::chr6:70385497..70385502,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=192 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENSMUST00000103394_5end | |||
|cluster_id=chr6:70385497..70385502,- | |||
|description=CAGE_peak_1_at_ENSMUST00000103394_5end | |||
|id=chr6:70385497..70385502,- | |||
|ontology_enrichment_celltype=CL:0000553!1.16e-14!6;CL:0000556!1.16e-14!6;CL:0000050!1.72e-09!9;CL:0002027!5.63e-08!3;CL:0002006!5.63e-08!3;CL:0002024!5.63e-08!3;CL:0000414!1.30e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.07e-31,6;CL:0000556,8.07e-31,6;CL:0000050,1.85e-20,9;CL:0002027,7.18e-16,3;CL:0002006,7.18e-16,3;CL:0002024,7.18e-16,3;CL:0000839,4.61e-14,13;CL:0000763,2.35e-11,16;CL:0002031,1.46e-09,25;CL:0000049,1.69e-09,19;CL:0000988,2.55e-07,32;CL:0002032,2.55e-07,32;CL:0000037,2.55e-07,32;CL:0000837,2.55e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.09e-15!51;UBERON:0002465!1.10e-08!3;UBERON:0002193!9.08e-08!48;UBERON:0000331!2.17e-07!3;UBERON:0002116!2.17e-07!3;UBERON:0001204!2.17e-07!3;UBERON:0001168!2.17e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.90e-17,3;UBERON:0001962,3.84e-12,2;UBERON:0001961,3.84e-12,2;UBERON:0001744,3.84e-12,2;UBERON:0001155,1.03e-11,2;UBERON:0000059,1.03e-11,2;UBERON:0002371,2.35e-11,16;UBERON:0002193,8.46e-10,48;UBERON:0002405,8.46e-10,48;UBERON:0007023,5.38e-09,51;UBERON:0001474,3.80e-08,22;UBERON:0004765,3.80e-08,22;UBERON:0001434,3.80e-08,22;UBERON:0000331,1.63e-07,3;UBERON:0002116,1.63e-07,3;UBERON:0001204,1.63e-07,3;UBERON:0001168,1.63e-07,3;UBERON:0000029,5.73e-07,1;UBERON:0001097,5.73e-07,1;UBERON:0003968,5.73e-07,1;UBERON:0001467,5.73e-07,1;UBERON:0003199,6.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,2.63217847606774,3.49780939064073,6.94016763788123,10.0093536532189,2.97072756258621,0.255129870453209,0,0,11.8394392867121,12.8469197397615,0,0,0,1.14014051673824,2.26827116783938,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,24.3401610628341,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,5.59175283654366,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.32225283331772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,9.56876932467975,0,0,0,0.683471138605126,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,2.63217847606774,3.49780939064073,6.94016763788123,10.0093536532189,2.97072756258621,0.255129870453209,0,0,11.8394392867121,12.8469197397615,0,0,0,1.14014051673824,2.26827116783938,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,24.3401610628341,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,5.59175283654366,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.32225283331772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,9.56876932467975,0,0,0,0.683471138605126,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000103394 | |||
}} | }} |
Latest revision as of 01:36, 6 August 2015
Short description: | p1@ENSMUST00000103394 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103394_5end |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | -27bp_to_ENSMUST00000103394_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.07e-31 | 6 |
megakaryocyte | 8.07e-31 | 6 |
megakaryocyte-erythroid progenitor cell | 1.85e-20 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 7.18e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.18e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.18e-16 | 3 |
myeloid lineage restricted progenitor cell | 4.61e-14 | 13 |
myeloid cell | 2.35e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 1.46e-09 | 25 |
common myeloid progenitor | 1.69e-09 | 19 |
hematopoietic cell | 2.55e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.55e-07 | 32 |
hematopoietic stem cell | 2.55e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.55e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.90e-17 | 3 |
gut-associated lymphoid tissue | 3.84e-12 | 2 |
mucosa-associated lymphoid tissue | 3.84e-12 | 2 |
lymphoid tissue | 3.84e-12 | 2 |
colon | 1.03e-11 | 2 |
large intestine | 1.03e-11 | 2 |
bone marrow | 2.35e-11 | 16 |
hemolymphoid system | 8.46e-10 | 48 |
immune system | 8.46e-10 | 48 |
adult organism | 5.38e-09 | 51 |
bone element | 3.80e-08 | 22 |
skeletal element | 3.80e-08 | 22 |
skeletal system | 3.80e-08 | 22 |
ileal mucosa | 1.63e-07 | 3 |
ileum | 1.63e-07 | 3 |
mucosa of small intestine | 1.63e-07 | 3 |
wall of small intestine | 1.63e-07 | 3 |
lymph node | 5.73e-07 | 1 |
axillary lymph node | 5.73e-07 | 1 |
peripheral lymph node | 5.73e-07 | 1 |
shoulder | 5.73e-07 | 1 |
egg chamber | 6.50e-07 | 1 |