FFCP PHASE1:Mm9::chr6:70676690..70676695,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=192 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:70676690..70676695,+ | |||
|description=CAGE_peak_at_chr6:70676690..70676695,+ | |description=CAGE_peak_at_chr6:70676690..70676695,+ | ||
|id=chr6:70676690..70676695,+ | |id=chr6:70676690..70676695,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.37e-15!6;CL:0000556!1.37e-15!6;CL:0000050!3.98e-10!9;CL:0002027!2.14e-08!3;CL:0002006!2.14e-08!3;CL:0002024!2.14e-08!3;CL:0000414!3.87e-08!11;CL:0000839!9.18e-07!13 | |ontology_enrichment_celltype=CL:0000553!1.37e-15!6;CL:0000556!1.37e-15!6;CL:0000050!3.98e-10!9;CL:0002027!2.14e-08!3;CL:0002006!2.14e-08!3;CL:0002024!2.14e-08!3;CL:0000414!3.87e-08!11;CL:0000839!9.18e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.59e-26,6;CL:0000556,3.59e-26,6;CL:0000050,1.79e-17,9;CL:0000839,4.23e-12,13;CL:0000763,8.01e-10,16;CL:0002027,3.51e-09,3;CL:0002006,3.51e-09,3;CL:0002024,3.51e-09,3;CL:0002031,1.01e-08,25;CL:0000049,2.93e-08,19;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1;CL:0000988,9.79e-07,32;CL:0002032,9.79e-07,32;CL:0000037,9.79e-07,32;CL:0000837,9.79e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-14!51;UBERON:0002465!5.69e-09!3;UBERON:0002193!1.06e-08!48;UBERON:0000331!8.10e-08!3;UBERON:0002116!8.10e-08!3;UBERON:0001204!8.10e-08!3;UBERON:0001168!8.10e-08!3;UBERON:0004923!5.69e-07!24;UBERON:0002106!6.23e-07!6;UBERON:0004457!6.23e-07!6;UBERON:0000042!6.23e-07!6;UBERON:0004854!6.23e-07!6;UBERON:0009034!6.23e-07!6;UBERON:0002095!6.23e-07!6;UBERON:0004782!6.23e-07!6;UBERON:0003281!6.23e-07!6;UBERON:0009664!6.23e-07!6;UBERON:0002296!6.23e-07!6;UBERON:0005602!6.23e-07!6;UBERON:0001179!6.23e-07!6;UBERON:0006293!6.23e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,4.00e-20,3;UBERON:0001962,8.16e-14,2;UBERON:0001961,8.16e-14,2;UBERON:0001744,8.16e-14,2;UBERON:0001474,5.68e-10,22;UBERON:0004765,5.68e-10,22;UBERON:0001434,5.68e-10,22;UBERON:0002193,6.76e-10,48;UBERON:0002405,6.76e-10,48;UBERON:0002371,8.01e-10,16;UBERON:0000029,5.41e-08,1;UBERON:0001097,5.41e-08,1;UBERON:0003968,5.41e-08,1;UBERON:0001467,5.41e-08,1;UBERON:0003199,7.32e-08,1;UBERON:0007023,3.00e-07,51;UBERON:0002204,9.54e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,3.84703008040669,0.699561878128147,4.25873923233621,4.11343300817216,2.97072756258621,0.0850432901510698,0,0,3.35984087866154,4.35877634027623,0,0,0,0.760093677825496,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,7.25026074212081,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0,0,0,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,13.4987995830304,0,0,0.941842285023455,0.546776910884101,0.457556346413045,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,3.84703008040669,0.699561878128147,4.25873923233621,4.11343300817216,2.97072756258621,0.0850432901510698,0,0,3.35984087866154,4.35877634027623,0,0,0,0.760093677825496,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,7.25026074212081,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0,0,0,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,13.4987995830304,0,0,0.941842285023455,0.546776910884101,0.457556346413045,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:70676690..70676695,+ | |short_description=p@chr6:70676690..70676695,+ | ||
}} | }} |
Latest revision as of 01:47, 6 August 2015
Short description: | p@chr6:70676690..70676695, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:70676690..70676695, + |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.59e-26 | 6 |
megakaryocyte | 3.59e-26 | 6 |
megakaryocyte-erythroid progenitor cell | 1.79e-17 | 9 |
myeloid lineage restricted progenitor cell | 4.23e-12 | 13 |
myeloid cell | 8.01e-10 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.51e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.51e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.51e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.01e-08 | 25 |
common myeloid progenitor | 2.93e-08 | 19 |
lymphocyte of B lineage | 2.37e-07 | 1 |
B cell | 2.37e-07 | 1 |
pro-B cell | 2.37e-07 | 1 |
hematopoietic cell | 9.79e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.79e-07 | 32 |
hematopoietic stem cell | 9.79e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 4.00e-20 | 3 |
gut-associated lymphoid tissue | 8.16e-14 | 2 |
mucosa-associated lymphoid tissue | 8.16e-14 | 2 |
lymphoid tissue | 8.16e-14 | 2 |
bone element | 5.68e-10 | 22 |
skeletal element | 5.68e-10 | 22 |
skeletal system | 5.68e-10 | 22 |
hemolymphoid system | 6.76e-10 | 48 |
immune system | 6.76e-10 | 48 |
bone marrow | 8.01e-10 | 16 |
lymph node | 5.41e-08 | 1 |
axillary lymph node | 5.41e-08 | 1 |
peripheral lymph node | 5.41e-08 | 1 |
shoulder | 5.41e-08 | 1 |
egg chamber | 7.32e-08 | 1 |
adult organism | 3.00e-07 | 51 |
musculoskeletal system | 9.54e-07 | 32 |