FFCP PHASE1:Mm9::chr13:49718335..49718348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=453 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:49718335..49718348,+ | |||
|description=CAGE_peak_at_chr13:49718335..49718348,+ | |description=CAGE_peak_at_chr13:49718335..49718348,+ | ||
|id=chr13:49718335..49718348,+ | |id=chr13:49718335..49718348,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.13e-15,6;CL:0000187,2.13e-15,6;CL:0000056,2.13e-15,6;CL:0000222,4.31e-13,7;CL:0000355,5.13e-10,9;CL:0000192,5.42e-09,3;CL:0000359,5.42e-09,3;CL:0002539,5.42e-09,3;CL:0000514,5.42e-09,3;CL:0002494,4.85e-08,3;CL:0000737,4.85e-08,3;CL:0000746,4.85e-08,3;CL:0000513,4.85e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.13e-10,9;UBERON:0002036,5.13e-10,9;UBERON:0002385,5.13e-10,9;UBERON:0000486,5.13e-10,9;UBERON:0007503,5.13e-10,9;UBERON:0001015,5.13e-10,9;UBERON:0002329,5.13e-10,9;UBERON:0003082,5.13e-10,9;UBERON:0003059,5.13e-10,9;UBERON:0007282,5.13e-10,9;UBERON:0004290,5.13e-10,9;UBERON:0009618,5.13e-10,9;UBERON:0001135,5.42e-09,3;UBERON:0004237,5.42e-09,3;UBERON:0004695,5.42e-09,3;UBERON:0002111,5.42e-09,3;UBERON:0004178,5.42e-09,3;UBERON:0000383,6.13e-09,10;UBERON:0007524,4.67e-08,11;UBERON:0003077,4.67e-08,11;UBERON:0007285,4.67e-08,11;UBERON:0000947,8.14e-07,4;UBERON:0001637,8.14e-07,4;UBERON:0004573,8.14e-07,4;UBERON:0003509,8.14e-07,4;UBERON:0004571,8.14e-07,4;UBERON:0010191,8.14e-07,4;UBERON:0004572,8.14e-07,4 | |||
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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03587271902309,3.85232338634155,2.38610777810186,0,0,0.219686182734472,0.777719596297134,0,0,0,0,0,3.08711323243136,2.0057340795713,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,2.55645483867087,4.41636207824877,4.24007489412408,0.14084341977668,8.98285341900225,2.54805239706646,0,0,0,0,0.11418387971906,0,0.742210695324124,0.346970653532272,1.52232739156071,0.691846491768175,0.904335843315735,0.470354828542819,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,1.32391173005411,0.248813941220186,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.753524089178575,0.408218994907967,1.0249097622788,0.374806898238915,0.258703370739016,0,0.378212160335639,0.879755620819744,0.219195732427575,1.39023624612799,1.39300866608867,1.23469281844766,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.697601834251224,0.268273401399619,0.583826711835847,0.329119699826961,0.985004784474571,0.324275238183423,0.438599962275997,1.09775057645525,0.805238512562231,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.667134131534611,0,0,0.494096864172033,0,0.198956472041151,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.49095073923223,0.189709611372772,0,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,2.87536413054709,0.372140947668503,0,0,0,0,1.10851914099963,0,0.162964976442026,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0.975668239288994,0.157635144106191,0.8858587585951,0.478364305972461,2.45794972073607,2.24490476425664,3.32692834737477,0,0,0.491764273019036,0,0,0,0.655739781506702,0.504941854408746,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0.425820255624806,0.178065603667255,0.488660878060728,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,1.06949213515416,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0,0.428674070063185,0.532020700926821,1.07021290561242,0.987294123612726,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,1.09181281873089,1.61837215661785,0.495920734352016,0.785267825952089,0.388844919875379,0,0,0,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.39061315453185,0.734015410979976,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0.358053391334963,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.93841237725591,0.73260649706906,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,1.55572709461131,1.44224540067226,0.962757628775446,0.758091635291392,0.25347929989024,0.943131706930381,1.12369808963859,0.832326981263301,0.229741875822453,0,0.927074607558844,0.578727661391115,2.47251540481984,1.03039244094078,1.02860775715625,1.59728225543404,2.14592570952589,0.581385666529314,0.376437521661322,0.761531471025089,0.73171189149109,0.789209134313529,0.814824683075171,2.24456908663095,0.949080144993393,0.985044823755635,0,0.309873682371932,0.964533054905707,0,0.233931608445408,0,0.57386499620653,0.441182838239031,0 | ||
|short_description=p@chr13:49718335..49718348,+ | |short_description=p@chr13:49718335..49718348,+ | ||
}} | }} |
Latest revision as of 02:12, 6 August 2015
Short description: | p@chr13:49718335..49718348, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:49718335..49718348, + |
Coexpression cluster: | MCL_coexpression_mm9:453 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.13e-15 | 6 |
muscle cell | 2.13e-15 | 6 |
myoblast | 2.13e-15 | 6 |
mesodermal cell | 4.31e-13 | 7 |
multi-potent skeletal muscle stem cell | 5.13e-10 | 9 |
smooth muscle cell | 5.42e-09 | 3 |
vascular associated smooth muscle cell | 5.42e-09 | 3 |
aortic smooth muscle cell | 5.42e-09 | 3 |
smooth muscle myoblast | 5.42e-09 | 3 |
cardiocyte | 4.85e-08 | 3 |
striated muscle cell | 4.85e-08 | 3 |
cardiac muscle cell | 4.85e-08 | 3 |
cardiac muscle myoblast | 4.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.13e-10 | 9 |
striated muscle tissue | 5.13e-10 | 9 |
muscle tissue | 5.13e-10 | 9 |
multilaminar epithelium | 5.13e-10 | 9 |
epithelial vesicle | 5.13e-10 | 9 |
musculature | 5.13e-10 | 9 |
somite | 5.13e-10 | 9 |
myotome | 5.13e-10 | 9 |
presomitic mesoderm | 5.13e-10 | 9 |
presumptive segmental plate | 5.13e-10 | 9 |
dermomyotome | 5.13e-10 | 9 |
trunk paraxial mesoderm | 5.13e-10 | 9 |
smooth muscle tissue | 5.42e-09 | 3 |
blood vessel smooth muscle | 5.42e-09 | 3 |
arterial system smooth muscle | 5.42e-09 | 3 |
artery smooth muscle tissue | 5.42e-09 | 3 |
aorta smooth muscle tissue | 5.42e-09 | 3 |
musculature of body | 6.13e-09 | 10 |
dense mesenchyme tissue | 4.67e-08 | 11 |
paraxial mesoderm | 4.67e-08 | 11 |
presumptive paraxial mesoderm | 4.67e-08 | 11 |
aorta | 8.14e-07 | 4 |
artery | 8.14e-07 | 4 |
systemic artery | 8.14e-07 | 4 |
arterial blood vessel | 8.14e-07 | 4 |
systemic arterial system | 8.14e-07 | 4 |
aortic system | 8.14e-07 | 4 |
arterial system | 8.14e-07 | 4 |