FFCP PHASE1:Mm9::chr18:80665617..80665662,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:80665617..80665662,+ to FFCP PHASE1:Mm9::chr18:80665617..80665662,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:80665617..80665662,+ | |||
|description=CAGE_peak_at_chr18:80665617..80665662,+ | |||
|id=chr18:80665617..80665662,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.55e-10!9;CL:0002251!8.55e-10!9;CL:0000791!1.13e-09!9;CL:0000789!1.13e-09!9;CL:0002420!1.13e-09!9;CL:0002419!1.13e-09!9;CL:0000790!1.13e-09!9;CL:0000838!2.31e-09!12;CL:0002250!1.35e-08!3;CL:0000542!1.49e-08!13;CL:0000051!1.49e-08!13;CL:0000624!8.25e-08!8;CL:0000084!9.20e-08!11;CL:0000827!9.20e-08!11;CL:0000063!8.26e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.44e-21,3;CL:0000791,6.27e-19,9;CL:0000789,6.27e-19,9;CL:0002420,6.27e-19,9;CL:0002419,6.27e-19,9;CL:0000790,6.27e-19,9;CL:0002563,8.11e-19,9;CL:0002251,8.11e-19,9;CL:0000084,1.69e-15,11;CL:0000827,1.69e-15,11;CL:0000838,3.28e-14,12;CL:0000624,3.87e-14,8;CL:0000542,4.05e-13,13;CL:0000051,4.05e-13,13;CL:0002076,2.64e-11,15;CL:0000738,4.97e-10,17;CL:0002087,4.97e-10,17;CL:0000815,1.56e-08,1;CL:0000792,1.56e-08,1;CL:0000223,1.81e-08,20;CL:0000625,1.05e-07,1;CL:0002031,8.48e-07,25;CL:0000066,9.26e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!8.55e-10!9;UBERON:0004808!8.55e-10!9;UBERON:0001277!8.55e-10!9;UBERON:0000014!3.87e-08!5;UBERON:0001003!3.87e-08!5;UBERON:0002097!3.87e-08!5;UBERON:0002199!3.87e-08!5;UBERON:0007029!3.87e-08!5;UBERON:0007376!3.87e-08!5;UBERON:0002416!3.87e-08!5;UBERON:0007383!3.87e-08!5;UBERON:0000485!7.35e-08!11;UBERON:0000344!3.36e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.11e-19,9;UBERON:0004808,8.11e-19,9;UBERON:0001277,8.11e-19,9;UBERON:0000485,2.08e-15,11;UBERON:0001242,4.82e-13,13;UBERON:0001262,4.82e-13,13;UBERON:0004786,4.82e-13,13;UBERON:0000014,6.67e-13,5;UBERON:0001003,6.67e-13,5;UBERON:0002097,6.67e-13,5;UBERON:0002199,6.67e-13,5;UBERON:0007029,6.67e-13,5;UBERON:0007376,6.67e-13,5;UBERON:0002416,6.67e-13,5;UBERON:0007383,6.67e-13,5;UBERON:0000344,2.64e-11,15;UBERON:0004923,4.80e-07,24 | |||
|phase1_expression=0,0.697950815278722,0,0,0,1.17515490338323,1.86890112476421,6.58528949552039,0,0.234064526321993,0,0,3.42401459862411,3.2345548895029,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,2.3108129580102,2.1610503896604,3.47087905646027,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,1.81374878235628,0,0.180938774784468,1.90995750405018,4.43180429311665,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,0.697950815278722,0,0,0,1.17515490338323,1.86890112476421,6.58528949552039,0,0.234064526321993,0,0,3.42401459862411,3.2345548895029,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,2.3108129580102,2.1610503896604,3.47087905646027,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,1.81374878235628,0,0.180938774784468,1.90995750405018,4.43180429311665,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p@chr18:80665617..80665662,+ | |||
}} | }} |
Latest revision as of 04:26, 6 August 2015
Short description: | p@chr18:80665617..80665662, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:80665617..80665662, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.44e-21 | 3 |
mature alpha-beta T cell | 6.27e-19 | 9 |
alpha-beta T cell | 6.27e-19 | 9 |
immature T cell | 6.27e-19 | 9 |
mature T cell | 6.27e-19 | 9 |
immature alpha-beta T cell | 6.27e-19 | 9 |
intestinal epithelial cell | 8.11e-19 | 9 |
epithelial cell of alimentary canal | 8.11e-19 | 9 |
T cell | 1.69e-15 | 11 |
pro-T cell | 1.69e-15 | 11 |
lymphoid lineage restricted progenitor cell | 3.28e-14 | 12 |
CD4-positive, alpha-beta T cell | 3.87e-14 | 8 |
lymphocyte | 4.05e-13 | 13 |
common lymphoid progenitor | 4.05e-13 | 13 |
endo-epithelial cell | 2.64e-11 | 15 |
leukocyte | 4.97e-10 | 17 |
nongranular leukocyte | 4.97e-10 | 17 |
regulatory T cell | 1.56e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.56e-08 | 1 |
endodermal cell | 1.81e-08 | 20 |
CD8-positive, alpha-beta T cell | 1.05e-07 | 1 |
hematopoietic lineage restricted progenitor cell | 8.48e-07 | 25 |
epithelial cell | 9.26e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.11e-19 | 9 |
gastrointestinal system epithelium | 8.11e-19 | 9 |
intestinal epithelium | 8.11e-19 | 9 |
simple columnar epithelium | 2.08e-15 | 11 |
intestinal mucosa | 4.82e-13 | 13 |
wall of intestine | 4.82e-13 | 13 |
gastrointestinal system mucosa | 4.82e-13 | 13 |
zone of skin | 6.67e-13 | 5 |
skin epidermis | 6.67e-13 | 5 |
skin of body | 6.67e-13 | 5 |
integument | 6.67e-13 | 5 |
surface | 6.67e-13 | 5 |
outer epithelium | 6.67e-13 | 5 |
integumental system | 6.67e-13 | 5 |
enveloping layer of ectoderm | 6.67e-13 | 5 |
mucosa | 2.64e-11 | 15 |
organ component layer | 4.80e-07 | 24 |