FFCP PHASE1:Mm9::chr5:128096070..128096088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1942 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:128096070..128096088,+ | |||
|description=CAGE_peak_at_chr5:128096070..128096088,+ | |description=CAGE_peak_at_chr5:128096070..128096088,+ | ||
|id=chr5:128096070..128096088,+ | |id=chr5:128096070..128096088,+ | ||
|ontology_enrichment_celltype=CL:0000049!6.62e-22!19;CL:0000988!2.92e-20!32;CL:0002032!2.92e-20!32;CL:0000037!2.92e-20!32;CL:0000566!2.92e-20!32;CL:0000837!2.92e-20!32;CL:0002320!3.79e-16!46;CL:0000134!3.79e-16!46;CL:0000763!1.05e-15!16;CL:0000219!5.34e-13!54;CL:0000557!1.94e-11!7;CL:0002031!4.27e-11!25;CL:0000839!2.41e-10!13;CL:0000553!5.90e-10!6;CL:0000556!5.90e-10!6;CL:0000063!9.98e-10!66;CL:0000034!2.18e-07!97 | |ontology_enrichment_celltype=CL:0000049!6.62e-22!19;CL:0000988!2.92e-20!32;CL:0002032!2.92e-20!32;CL:0000037!2.92e-20!32;CL:0000566!2.92e-20!32;CL:0000837!2.92e-20!32;CL:0002320!3.79e-16!46;CL:0000134!3.79e-16!46;CL:0000763!1.05e-15!16;CL:0000219!5.34e-13!54;CL:0000557!1.94e-11!7;CL:0002031!4.27e-11!25;CL:0000839!2.41e-10!13;CL:0000553!5.90e-10!6;CL:0000556!5.90e-10!6;CL:0000063!9.98e-10!66;CL:0000034!2.18e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.08e-29,32;CL:0002032,2.08e-29,32;CL:0000037,2.08e-29,32;CL:0000837,2.08e-29,32;CL:0000049,4.87e-28,19;CL:0002320,3.74e-20,46;CL:0000134,3.74e-20,46;CL:0000219,5.21e-17,54;CL:0000763,1.03e-14,16;CL:0002031,8.30e-13,25;CL:0000553,7.52e-11,6;CL:0000556,7.52e-11,6;CL:0000723,1.29e-09,91;CL:0000048,1.29e-09,91;CL:0000034,6.08e-09,97;CL:0000557,6.26e-09,7;CL:0000839,1.41e-08,13;CL:0000945,1.56e-08,1;CL:0000236,1.56e-08,1;CL:0000826,1.56e-08,1;CL:0000050,2.07e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.66e-19!16;UBERON:0002384!3.79e-16!46;UBERON:0001474!4.61e-15!22;UBERON:0004765!4.61e-15!22;UBERON:0001434!4.61e-15!22;UBERON:0002193!2.83e-11!48;UBERON:0002204!2.11e-09!32;UBERON:0002390!3.84e-08!45;UBERON:0003061!3.84e-08!45;UBERON:0002405!2.29e-07!70;UBERON:0002465!3.17e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.74e-20,46;UBERON:0002371,1.03e-14,16;UBERON:0001474,1.23e-10,22;UBERON:0004765,1.23e-10,22;UBERON:0001434,1.23e-10,22;UBERON:0000029,3.50e-08,1;UBERON:0001097,3.50e-08,1;UBERON:0003968,3.50e-08,1;UBERON:0001467,3.50e-08,1;UBERON:0002204,3.21e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,3.3123527362615,3.01651753932625,2.54633791078818,0,2.18440092641948,1.56719873483361,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.71799987865587,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,4.43315960671905,4.79922184794726,3.43089613097275,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.546776910884101,0.686334519619568,0.169978429993855,0.559805809294632,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,3.3123527362615,3.01651753932625,2.54633791078818,0,2.18440092641948,1.56719873483361,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.71799987865587,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,4.43315960671905,4.79922184794726,3.43089613097275,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.546776910884101,0.686334519619568,0.169978429993855,0.559805809294632,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:128096070..128096088,+ | |short_description=p@chr5:128096070..128096088,+ | ||
}} | }} |
Latest revision as of 08:24, 6 August 2015
Short description: | p@chr5:128096070..128096088, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:128096070..128096088, + |
Coexpression cluster: | MCL_coexpression_mm9:1942 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.08e-29 | 32 |
hematopoietic oligopotent progenitor cell | 2.08e-29 | 32 |
hematopoietic stem cell | 2.08e-29 | 32 |
hematopoietic multipotent progenitor cell | 2.08e-29 | 32 |
common myeloid progenitor | 4.87e-28 | 19 |
connective tissue cell | 3.74e-20 | 46 |
mesenchymal cell | 3.74e-20 | 46 |
motile cell | 5.21e-17 | 54 |
myeloid cell | 1.03e-14 | 16 |
hematopoietic lineage restricted progenitor cell | 8.30e-13 | 25 |
megakaryocyte progenitor cell | 7.52e-11 | 6 |
megakaryocyte | 7.52e-11 | 6 |
somatic stem cell | 1.29e-09 | 91 |
multi fate stem cell | 1.29e-09 | 91 |
stem cell | 6.08e-09 | 97 |
granulocyte monocyte progenitor cell | 6.26e-09 | 7 |
myeloid lineage restricted progenitor cell | 1.41e-08 | 13 |
lymphocyte of B lineage | 1.56e-08 | 1 |
B cell | 1.56e-08 | 1 |
pro-B cell | 1.56e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 2.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.74e-20 | 46 |
bone marrow | 1.03e-14 | 16 |
bone element | 1.23e-10 | 22 |
skeletal element | 1.23e-10 | 22 |
skeletal system | 1.23e-10 | 22 |
lymph node | 3.50e-08 | 1 |
axillary lymph node | 3.50e-08 | 1 |
peripheral lymph node | 3.50e-08 | 1 |
shoulder | 3.50e-08 | 1 |
musculoskeletal system | 3.21e-07 | 32 |