FFCP PHASE1:Mm9::chrX:70736102..70736126,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=188 | |MCL_coexpression_id=188 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:70736102..70736126,+ | |||
|description=CAGE_peak_at_chrX:70736102..70736126,+ | |description=CAGE_peak_at_chrX:70736102..70736126,+ | ||
|id=chrX:70736102..70736126,+ | |id=chrX:70736102..70736126,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.97e-17,7;CL:0000680,3.80e-15,6;CL:0000187,3.80e-15,6;CL:0000056,3.80e-15,6;CL:0000355,8.62e-10,9;CL:0000192,2.15e-08,3;CL:0000359,2.15e-08,3;CL:0002539,2.15e-08,3;CL:0000514,2.15e-08,3;CL:0002494,2.27e-08,3;CL:0000737,2.27e-08,3;CL:0000746,2.27e-08,3;CL:0000513,2.27e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.89e-12,5;UBERON:0007500,2.89e-12,5;UBERON:0001981,2.89e-12,5;UBERON:0002049,2.89e-12,5;UBERON:0007798,2.89e-12,5;UBERON:0004537,2.89e-12,5;UBERON:0006965,2.89e-12,5;UBERON:0000383,3.30e-11,10;UBERON:0000947,1.82e-10,4;UBERON:0001637,1.82e-10,4;UBERON:0004573,1.82e-10,4;UBERON:0003509,1.82e-10,4;UBERON:0004571,1.82e-10,4;UBERON:0010191,1.82e-10,4;UBERON:0004572,1.82e-10,4;UBERON:0001134,8.62e-10,9;UBERON:0002036,8.62e-10,9;UBERON:0002385,8.62e-10,9;UBERON:0000486,8.62e-10,9;UBERON:0007503,8.62e-10,9;UBERON:0001015,8.62e-10,9;UBERON:0002329,8.62e-10,9;UBERON:0003082,8.62e-10,9;UBERON:0003059,8.62e-10,9;UBERON:0007282,8.62e-10,9;UBERON:0004290,8.62e-10,9;UBERON:0009618,8.62e-10,9;UBERON:0001135,2.15e-08,3;UBERON:0004237,2.15e-08,3;UBERON:0004695,2.15e-08,3;UBERON:0002111,2.15e-08,3;UBERON:0004178,2.15e-08,3;UBERON:0007524,7.64e-08,11;UBERON:0003077,7.64e-08,11;UBERON:0007285,7.64e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68688044031483,9.0225468785368,4.22157529971868,7.04152209913235,0,0,0.388859798148567,1.1198913730029,0,0,0,0,6.68874533693462,7.44986943840768,8.25075347643908,0,0.528990979272033,0,1.35537812827653,0,0,0.988866362566974,1.4209602298922,0.898800331555214,0.768436610643109,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.075726193333184,0,1.44932244350839,0,0,0,0,0,0.421333260395256,3.40860645156115,3.89679006904303,4.59341446863442,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.29688427812965,0.346970653532272,1.21786191324856,0,0.301445281105245,0.587943535678524,0,0.494389935468748,2.74738778147832,0,0.808834249737046,0.883366073841574,1.45462575940567,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,1.62942982160506,0.995255764880744,0.505445516867349,0,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.512454881139399,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,1.4404749548556,0,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.467061369468678,0.329119699826961,0.656669856316381,0.405344047729279,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.795825888164603,0.19496408711912,1.79763881730844,0.648414149624083,0.199141273254367,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.295220295959204,0.470996183524124,0.740382983530803,0.296452627087149,0,0,0.224862112384854,0,0.241177159752417,0,0.575392274901621,1.62135226775035,0.274561413188081,1.43768206527355,1.48856379067401,0.624075346229121,0,0.179397413521912,0.964887042726734,1.10851914099963,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,0.335012514883631,1.6663054862021,0.390267295715598,1.41871629695572,1.32878813789265,0.956728611944923,0.491589944147214,0.863424909329478,1.3018415272336,0,0,0,0,0,0.117211686592203,4.26230857979356,1.00988370881749,0,0.390438744296638,0,0,0,0,0.809621403349789,0,0.395287777946524,0,0.425820255624806,0.534196811001766,0.651547837414304,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.16488625294148,2.09903754704677,0.542816324353403,0.238744688006273,0.328281799490123,1.1659233465194,0,0.512612642393558,0.412773735926445,0.555583582109135,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,1.90934123603023,0,0,0.216010681643603,0.209088296014469,0.218362563746178,1.07891477107857,0.661227645802687,0.785267825952089,0.259229946583586,1.24267862617385,0,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,1.35164900392623,1.5256441023948,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,1.15913756419314,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.21553358534147,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.561849044819294,0.512201219238954,0.287177344778066,0.476293691283074,0.579421629724277,0,0,0.294397840268795,0.685738504770831,0.354951612318675,0.715308569841963,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.619747364743864,0.385813221962283,1.49886346762768,0.467863216890817,0.429742108096597,2.10417165275728,0.882365676478062,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68688044031483,9.0225468785368,4.22157529971868,7.04152209913235,0,0,0.388859798148567,1.1198913730029,0,0,0,0,6.68874533693462,7.44986943840768,8.25075347643908,0,0.528990979272033,0,1.35537812827653,0,0,0.988866362566974,1.4209602298922,0.898800331555214,0.768436610643109,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.075726193333184,0,1.44932244350839,0,0,0,0,0,0.421333260395256,3.40860645156115,3.89679006904303,4.59341446863442,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.29688427812965,0.346970653532272,1.21786191324856,0,0.301445281105245,0.587943535678524,0,0.494389935468748,2.74738778147832,0,0.808834249737046,0.883366073841574,1.45462575940567,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,1.62942982160506,0.995255764880744,0.505445516867349,0,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.512454881139399,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,1.4404749548556,0,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.467061369468678,0.329119699826961,0.656669856316381,0.405344047729279,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.795825888164603,0.19496408711912,1.79763881730844,0.648414149624083,0.199141273254367,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.295220295959204,0.470996183524124,0.740382983530803,0.296452627087149,0,0,0.224862112384854,0,0.241177159752417,0,0.575392274901621,1.62135226775035,0.274561413188081,1.43768206527355,1.48856379067401,0.624075346229121,0,0.179397413521912,0.964887042726734,1.10851914099963,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,0.335012514883631,1.6663054862021,0.390267295715598,1.41871629695572,1.32878813789265,0.956728611944923,0.491589944147214,0.863424909329478,1.3018415272336,0,0,0,0,0,0.117211686592203,4.26230857979356,1.00988370881749,0,0.390438744296638,0,0,0,0,0.809621403349789,0,0.395287777946524,0,0.425820255624806,0.534196811001766,0.651547837414304,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.16488625294148,2.09903754704677,0.542816324353403,0.238744688006273,0.328281799490123,1.1659233465194,0,0.512612642393558,0.412773735926445,0.555583582109135,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,1.90934123603023,0,0,0.216010681643603,0.209088296014469,0.218362563746178,1.07891477107857,0.661227645802687,0.785267825952089,0.259229946583586,1.24267862617385,0,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,1.35164900392623,1.5256441023948,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,1.15913756419314,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.21553358534147,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.561849044819294,0.512201219238954,0.287177344778066,0.476293691283074,0.579421629724277,0,0,0.294397840268795,0.685738504770831,0.354951612318675,0.715308569841963,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.619747364743864,0.385813221962283,1.49886346762768,0.467863216890817,0.429742108096597,2.10417165275728,0.882365676478062,1.39120701372253 | ||
|short_description=p@chrX:70736102..70736126,+ | |short_description=p@chrX:70736102..70736126,+ | ||
}} | }} |
Latest revision as of 09:52, 6 August 2015
Short description: | p@chrX:70736102..70736126, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:70736102..70736126, + |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.97e-17 | 7 |
muscle precursor cell | 3.80e-15 | 6 |
muscle cell | 3.80e-15 | 6 |
myoblast | 3.80e-15 | 6 |
multi-potent skeletal muscle stem cell | 8.62e-10 | 9 |
smooth muscle cell | 2.15e-08 | 3 |
vascular associated smooth muscle cell | 2.15e-08 | 3 |
aortic smooth muscle cell | 2.15e-08 | 3 |
smooth muscle myoblast | 2.15e-08 | 3 |
cardiocyte | 2.27e-08 | 3 |
striated muscle cell | 2.27e-08 | 3 |
cardiac muscle cell | 2.27e-08 | 3 |
cardiac muscle myoblast | 2.27e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.89e-12 | 5 |
epithelial tube open at both ends | 2.89e-12 | 5 |
blood vessel | 2.89e-12 | 5 |
vasculature | 2.89e-12 | 5 |
vascular system | 2.89e-12 | 5 |
blood vasculature | 2.89e-12 | 5 |
vascular cord | 2.89e-12 | 5 |
musculature of body | 3.30e-11 | 10 |
aorta | 1.82e-10 | 4 |
artery | 1.82e-10 | 4 |
systemic artery | 1.82e-10 | 4 |
arterial blood vessel | 1.82e-10 | 4 |
systemic arterial system | 1.82e-10 | 4 |
aortic system | 1.82e-10 | 4 |
arterial system | 1.82e-10 | 4 |
skeletal muscle tissue | 8.62e-10 | 9 |
striated muscle tissue | 8.62e-10 | 9 |
muscle tissue | 8.62e-10 | 9 |
multilaminar epithelium | 8.62e-10 | 9 |
epithelial vesicle | 8.62e-10 | 9 |
musculature | 8.62e-10 | 9 |
somite | 8.62e-10 | 9 |
myotome | 8.62e-10 | 9 |
presomitic mesoderm | 8.62e-10 | 9 |
presumptive segmental plate | 8.62e-10 | 9 |
dermomyotome | 8.62e-10 | 9 |
trunk paraxial mesoderm | 8.62e-10 | 9 |
smooth muscle tissue | 2.15e-08 | 3 |
blood vessel smooth muscle | 2.15e-08 | 3 |
arterial system smooth muscle | 2.15e-08 | 3 |
artery smooth muscle tissue | 2.15e-08 | 3 |
aorta smooth muscle tissue | 2.15e-08 | 3 |
dense mesenchyme tissue | 7.64e-08 | 11 |
paraxial mesoderm | 7.64e-08 | 11 |
presumptive paraxial mesoderm | 7.64e-08 | 11 |