FFCP PHASE1:Mm9::chr11:69479394..69479407,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69479394..69479407,- | |||
|description=CAGE_peak_at_chr11:69479394..69479407,- | |description=CAGE_peak_at_chr11:69479394..69479407,- | ||
|id=chr11:69479394..69479407,- | |id=chr11:69479394..69479407,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.44e-20,4;CL:0000766,4.44e-20,4;CL:0000234,4.44e-20,4;CL:0000576,4.44e-20,4;CL:0000235,4.44e-20,4;CL:0000864,4.44e-20,4;CL:0002009,4.44e-20,4;CL:0000040,4.44e-20,4;CL:0000559,4.44e-20,4;CL:0002092,9.88e-16,3;CL:0002540,9.88e-16,3;CL:0000473,1.48e-11,7;CL:0000557,1.48e-11,7;CL:0002476,4.77e-11,2;CL:0000878,1.04e-10,2;CL:0000129,1.04e-10,2;CL:0002494,6.81e-07,3;CL:0000737,6.81e-07,3;CL:0000746,6.81e-07,3;CL:0000513,6.81e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.20e-11!32;UBERON:0003081!1.80e-09!88;UBERON:0000926!1.09e-08!193;UBERON:0004120!1.09e-08!193;UBERON:0006603!1.09e-08!193;UBERON:0001474!5.84e-08!22;UBERON:0004765!5.84e-08!22;UBERON:0001434!5.84e-08!22;UBERON:0002193!2.15e-07!48;UBERON:0002405!2.20e-07!70;UBERON:0002390!5.16e-07!45;UBERON:0003061!5.16e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.67e-17,22;UBERON:0004765,5.67e-17,22;UBERON:0001434,5.67e-17,22;UBERON:0002204,1.04e-16,32;UBERON:0002371,1.42e-14,16;UBERON:0005795,8.91e-11,4;UBERON:0000995,8.91e-11,4;UBERON:0001987,5.21e-10,2;UBERON:0003124,5.21e-10,2;UBERON:0004340,5.21e-10,2;UBERON:0003975,1.00e-08,5;UBERON:0003081,1.46e-08,87;UBERON:0005631,5.92e-07,3;UBERON:0000478,5.92e-07,3;UBERON:0000158,5.92e-07,3;UBERON:0002193,6.19e-07,48;UBERON:0002405,6.19e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0,0.42438965179803,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,1.45653105909346,0,0,0.367093504323363,0,0,0,0.388859798148567,0,0,0,0.725362142011344,0.336093799142464,0.514518872071894,1.14613375975503,2.06268836910977,0,0,0,0,0,42.2952867122258,106.797567157233,46.8916875864426,14.3808053048834,6.91592949578798,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,1.29468941823586,0.29688427812965,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0.494389935468748,0.433798070759735,4.42305275974937,0.808834249737046,0.662524555381181,2.90925151881133,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0.60281927134286,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,2.87536413054709,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.433947175744535,75.3956419696361,44.6002660731342,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,1.17335854031855,2.1183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,1.02522528478712,0.206386867963223,0.555583582109135,0.565105371014073,0.136694227721025,0.457556346413045,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.198681354781265,0.360586348559907,0,0.100966449948148,0.304827226619999,0.403304740547362,0.682205165178267,0.192423683280659,0.350630706544707,0.226730383615211,0,0.179427713218951,0.167884616364078,0,1.50145980360946,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0,0.42438965179803,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,1.45653105909346,0,0,0.367093504323363,0,0,0,0.388859798148567,0,0,0,0.725362142011344,0.336093799142464,0.514518872071894,1.14613375975503,2.06268836910977,0,0,0,0,0,42.2952867122258,106.797567157233,46.8916875864426,14.3808053048834,6.91592949578798,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,1.29468941823586,0.29688427812965,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0.494389935468748,0.433798070759735,4.42305275974937,0.808834249737046,0.662524555381181,2.90925151881133,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0.60281927134286,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,2.87536413054709,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.433947175744535,75.3956419696361,44.6002660731342,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,1.17335854031855,2.1183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,1.02522528478712,0.206386867963223,0.555583582109135,0.565105371014073,0.136694227721025,0.457556346413045,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.198681354781265,0.360586348559907,0,0.100966449948148,0.304827226619999,0.403304740547362,0.682205165178267,0.192423683280659,0.350630706544707,0.226730383615211,0,0.179427713218951,0.167884616364078,0,1.50145980360946,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr11:69479394..69479407,- | |short_description=p@chr11:69479394..69479407,- | ||
}} | }} |
Latest revision as of 10:26, 6 August 2015
Short description: | p@chr11:69479394..69479407, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69479394..69479407, - |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.44e-20 | 4 |
myeloid leukocyte | 4.44e-20 | 4 |
phagocyte | 4.44e-20 | 4 |
monocyte | 4.44e-20 | 4 |
macrophage | 4.44e-20 | 4 |
tissue-resident macrophage | 4.44e-20 | 4 |
macrophage dendritic cell progenitor | 4.44e-20 | 4 |
monoblast | 4.44e-20 | 4 |
promonocyte | 4.44e-20 | 4 |
bone marrow cell | 9.88e-16 | 3 |
mesenchymal stem cell of the bone marrow | 9.88e-16 | 3 |
defensive cell | 1.48e-11 | 7 |
granulocyte monocyte progenitor cell | 1.48e-11 | 7 |
bone marrow macrophage | 4.77e-11 | 2 |
central nervous system macrophage | 1.04e-10 | 2 |
microglial cell | 1.04e-10 | 2 |
cardiocyte | 6.81e-07 | 3 |
striated muscle cell | 6.81e-07 | 3 |
cardiac muscle cell | 6.81e-07 | 3 |
cardiac muscle myoblast | 6.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.67e-17 | 22 |
skeletal element | 5.67e-17 | 22 |
skeletal system | 5.67e-17 | 22 |
musculoskeletal system | 1.04e-16 | 32 |
bone marrow | 1.42e-14 | 16 |
embryonic uterus | 8.91e-11 | 4 |
uterus | 8.91e-11 | 4 |
placenta | 5.21e-10 | 2 |
chorion | 5.21e-10 | 2 |
allantois | 5.21e-10 | 2 |
internal female genitalia | 1.00e-08 | 5 |
lateral plate mesoderm | 1.46e-08 | 87 |
extraembryonic membrane | 5.92e-07 | 3 |
extraembryonic structure | 5.92e-07 | 3 |
membranous layer | 5.92e-07 | 3 |
hemolymphoid system | 6.19e-07 | 48 |
immune system | 6.19e-07 | 48 |