FFCP PHASE1:Hg19::chr17:46919009..46919024,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46919009..46919024,+ to FFCP PHASE1:Hg19::chr17:46919009..46919024,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10241 | |EntrezGene=10241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29912 | |HGNC=29912 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF70 | |UniProt=D6RF70 | ||
|association_with_transcript=84bp_to_ENST00000502761_5end | |||
|cluster_id=chr17:46919009..46919024,+ | |||
|coexpression_cluster_id=C3649 | |||
|description=CAGE_peak_8_at_CALCOCO2_5end | |||
|id=chr17:46919009..46919024,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.04e-20;13!CL:0002615;5.21e-14;3!CL:0002580;3.57e-13;3!CL:0002617;2.52e-10;2!CL:0000746;9.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.49e-17,15;CL:0002615,5.37e-14,3;CL:0002580,7.99e-13,3;CL:0002617,2.42e-10,2;CL:0000746,8.76e-07,3;CL:0000513,8.76e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;9.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-36!115;UBERON:0002616!5.96e-12!59;UBERON:0003075!7.56e-12!86;UBERON:0007284!7.56e-12!86;UBERON:0005743!1.40e-11!86;UBERON:0002346!9.17e-11!90;UBERON:0000073!3.86e-10!94;UBERON:0001016!3.86e-10!94;UBERON:0000955!4.94e-10!69;UBERON:0006238!4.94e-10!69;UBERON:0001049!6.33e-10!57;UBERON:0005068!6.33e-10!57;UBERON:0006241!6.33e-10!57;UBERON:0007135!6.33e-10!57;UBERON:0001017!2.11e-09!82;UBERON:0002298!1.09e-08!8;UBERON:0000153!3.84e-08!129;UBERON:0007811!3.84e-08!129;UBERON:0000033!1.03e-07!123;UBERON:0000477!2.55e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.98e-15;10!UBERON:0001443;5.71e-14;11!UBERON:0001896;3.57e-13;3!UBERON:0005290;3.57e-13;3!UBERON:0003688;6.52e-12;6!UBERON:0002358;6.52e-12;6!UBERON:0003684;6.52e-12;6!UBERON:0001178;6.52e-12;6!UBERON:0004457;5.84e-08;9!UBERON:0000042;5.84e-08;9!UBERON:0007100;1.18e-07;25!UBERON:0003978;5.64e-07;3!UBERON:0000946;5.64e-07;3!UBERON:0002298;8.20e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.15e-15,10;UBERON:0001443,8.68e-14,11;UBERON:0007023,3.18e-13,114;UBERON:0001896,6.48e-13,3;UBERON:0005290,6.48e-13,3;UBERON:0010096,6.48e-13,3;UBERON:0003688,6.65e-12,6;UBERON:0002358,6.65e-12,6;UBERON:0003684,6.65e-12,6;UBERON:0001178,6.65e-12,6;UBERON:0007100,5.13e-07,27;UBERON:0003978,5.49e-07,3;UBERON:0009751,5.49e-07,3;UBERON:0000946,5.49e-07,3;UBERON:0002523,5.49e-07,3;UBERON:0005983,5.49e-07,3;UBERON:0002165,5.49e-07,3;UBERON:0002062,5.49e-07,3;UBERON:0007280,5.49e-07,3;UBERON:0000966,6.69e-07,6;UBERON:0005388,6.69e-07,6;UBERON:0001802,6.69e-07,6 | |||
|phase1_expression=3.63356758541113,3.42560838225573,1.40954404095971,2.00146596706261,3.12872766099101,3.48935409640147,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0.255725123687061,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0.134710672069688,0.490385709340376,0.151357427644931,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,1.88215698667853,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.473107245101804,0.468565659970853,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,1.12264037773229,1.28139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,1.64007322849853,0.976135183992909,4.73988653579522,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,4.68826173670061,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0.933118762985422,0,0,0,0.493217028184668,0,0,0.969332746095218,0.185536196323703,0,0,0,5.07499702804355,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.14994833854341,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45483524732629,0,0.90392296312213,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,2.7499250881402,2.15361907373044,0.599037001496973,1.71690419254628,2.00854311697685,1.00775208730089,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.242998226632099,0,1.10327990218877,0.472091293214983,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.517131825446202,0.52893040697076,0,0,1.38823636338003,0.78602152549833,2.89967338743037,1.48849806543585,0,0,0,1.08803560673895,1.0027595760908,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,1.14681839138014,1.33114861844223,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0,0,0.813741466409323,0,0,0,1.59238355479446,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,1.82129753081038,0.177404740325278,0.345701962667338,0,0.271878931907327,0.131545547125698,0,0,0.549451649953598,0.157115589916002,0,0,0,0,1.1436247068265,0,0,0,0,0,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,2.15591894398119,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0.490296643507811,0,0.196308467114945,0.594092800654172,0,0.169927114687817,0.281951753939561,0.193373663920732,0.89947040332436,0,0,0,0,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0,0,0.413731983447581,0.213233981900981,0.23806443146374,0,0.248298857183432,0,2.48223917284843,0.202117188958219,0.217716747896961,0,0.134704106029175,0.502055437748735,0,0,0,0,0,0,0.611207220914332,0,11.9836219353392,0.402547587182052,1.28227396921293 | |phase1_expression=3.63356758541113,3.42560838225573,1.40954404095971,2.00146596706261,3.12872766099101,3.48935409640147,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0.255725123687061,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0.134710672069688,0.490385709340376,0.151357427644931,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,1.88215698667853,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.473107245101804,0.468565659970853,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,1.12264037773229,1.28139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,1.64007322849853,0.976135183992909,4.73988653579522,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,4.68826173670061,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0.933118762985422,0,0,0,0.493217028184668,0,0,0.969332746095218,0.185536196323703,0,0,0,5.07499702804355,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.14994833854341,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45483524732629,0,0.90392296312213,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,2.7499250881402,2.15361907373044,0.599037001496973,1.71690419254628,2.00854311697685,1.00775208730089,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.242998226632099,0,1.10327990218877,0.472091293214983,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.517131825446202,0.52893040697076,0,0,1.38823636338003,0.78602152549833,2.89967338743037,1.48849806543585,0,0,0,1.08803560673895,1.0027595760908,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,1.14681839138014,1.33114861844223,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0,0,0.813741466409323,0,0,0,1.59238355479446,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,1.82129753081038,0.177404740325278,0.345701962667338,0,0.271878931907327,0.131545547125698,0,0,0.549451649953598,0.157115589916002,0,0,0,0,1.1436247068265,0,0,0,0,0,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,2.15591894398119,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0.490296643507811,0,0.196308467114945,0.594092800654172,0,0.169927114687817,0.281951753939561,0.193373663920732,0.89947040332436,0,0,0,0,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0,0,0.413731983447581,0.213233981900981,0.23806443146374,0,0.248298857183432,0,2.48223917284843,0.202117188958219,0.217716747896961,0,0.134704106029175,0.502055437748735,0,0,0,0,0,0,0.611207220914332,0,11.9836219353392,0.402547587182052,1.28227396921293 | ||
|short_description=p8@CALCOCO2 | |||
}} | }} |
Latest revision as of 18:20, 15 September 2015
Short description: | p8@CALCOCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CALCOCO2_5end |
Coexpression cluster: | C3649_vagina_Adipocyte_adipose_breast_skeletal_heart_Retinal |
Association with transcript: | 84bp_to_ENST00000502761_5end |
EntrezGene: | CALCOCO2 |
HGNC: | 29912 |
UniProt: | D6RF70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.49e-17 | 15 |
adipocyte of omentum tissue | 5.37e-14 | 3 |
preadipocyte of the breast | 7.99e-13 | 3 |
adipocyte of breast | 2.42e-10 | 2 |
cardiac muscle cell | 8.76e-07 | 3 |
cardiac muscle myoblast | 8.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 3.15e-15 | 10 |
chest | 8.68e-14 | 11 |
adult organism | 3.18e-13 | 114 |
medulla oblongata | 6.48e-13 | 3 |
myelencephalon | 6.48e-13 | 3 |
future myelencephalon | 6.48e-13 | 3 |
omentum | 6.65e-12 | 6 |
peritoneum | 6.65e-12 | 6 |
abdominal cavity | 6.65e-12 | 6 |
visceral peritoneum | 6.65e-12 | 6 |
primary circulatory organ | 5.13e-07 | 27 |
valve | 5.49e-07 | 3 |
cardiac mesenchyme | 5.49e-07 | 3 |
cardial valve | 5.49e-07 | 3 |
tunica intima | 5.49e-07 | 3 |
heart layer | 5.49e-07 | 3 |
endocardium | 5.49e-07 | 3 |
endocardial cushion | 5.49e-07 | 3 |
presumptive endocardium | 5.49e-07 | 3 |
retina | 6.69e-07 | 6 |
photoreceptor array | 6.69e-07 | 6 |
posterior segment of eyeball | 6.69e-07 | 6 |