FFCP PHASE1:Hg19::chr20:33462888..33462894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55902 | |EntrezGene=55902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15814 | |HGNC=15814 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWU3 | |UniProt=E7EWU3 | ||
|association_with_transcript=-8bp_to_ENST00000336325_5end | |association_with_transcript=-8bp_to_ENST00000336325_5end | ||
|cluster_id=chr20:33462888..33462894,+ | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_12_at_ACSS2_5end | |description=CAGE_peak_12_at_ACSS2_5end | ||
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|ontology_enrichment_celltype=CL:0000235!3.60e-22!10;CL:0000840!5.62e-14!5;CL:0001029!5.62e-14!5;CL:0002194!6.41e-10!63;CL:0000576!6.41e-10!63;CL:0000040!6.41e-10!63;CL:0000559!6.41e-10!63;CL:0002009!1.40e-09!65;CL:0000990!1.72e-09!8;CL:0000839!8.20e-09!70;CL:0000557!1.13e-08!71;CL:0000766!5.04e-08!76;CL:0000451!7.50e-08!10 | |ontology_enrichment_celltype=CL:0000235!3.60e-22!10;CL:0000840!5.62e-14!5;CL:0001029!5.62e-14!5;CL:0002194!6.41e-10!63;CL:0000576!6.41e-10!63;CL:0000040!6.41e-10!63;CL:0000559!6.41e-10!63;CL:0002009!1.40e-09!65;CL:0000990!1.72e-09!8;CL:0000839!8.20e-09!70;CL:0000557!1.13e-08!71;CL:0000766!5.04e-08!76;CL:0000451!7.50e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.76e-88;6!CL:0000473;1.21e-12;39!CL:0000234;1.21e-12;39!CL:0002563;1.70e-09;4!CL:0000840;8.48e-07;5 | |ontology_enrichment_celltype_v019=CL:0000235;8.76e-88;6!CL:0000473;1.21e-12;39!CL:0000234;1.21e-12;39!CL:0002563;1.70e-09;4!CL:0000840;8.48e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.76e-88,6;CL:0002194,3.05e-14,59;CL:0000576,3.05e-14,59;CL:0000040,3.05e-14,59;CL:0000559,3.05e-14,59;CL:0002009,8.45e-14,61;CL:0000839,8.32e-13,66;CL:0000557,1.26e-12,67;CL:0000766,8.59e-12,72;CL:0000473,1.29e-11,48;CL:0000234,1.29e-11,48;CL:0002563,1.70e-09,4;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0002087,1.44e-07,115;CL:0002031,2.87e-07,120;CL:0000840,8.48e-07,5;CL:0001029,8.48e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.46e-07!80;UBERON:0002405!2.21e-07!115;UBERON:0001474!5.96e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!1.46e-07!80;UBERON:0002405!2.21e-07!115;UBERON:0001474!5.96e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.70e-09;4!UBERON:0001262;1.70e-09;4!UBERON:0004786;1.70e-09;4!UBERON:0004808;1.70e-09;4!UBERON:0001277;1.70e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0001242;1.70e-09;4!UBERON:0001262;1.70e-09;4!UBERON:0004786;1.70e-09;4!UBERON:0004808;1.70e-09;4!UBERON:0001277;1.70e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108 | |||
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|short_description=p12@ACSS2 | |short_description=p12@ACSS2 | ||
}} | }} |
Latest revision as of 18:27, 15 September 2015
Short description: | p12@ACSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ACSS2_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -8bp_to_ENST00000336325_5end |
EntrezGene: | ACSS2 |
HGNC: | 15814 |
UniProt: | E7EWU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.76e-88 | 6 |
monopoietic cell | 3.05e-14 | 59 |
monocyte | 3.05e-14 | 59 |
monoblast | 3.05e-14 | 59 |
promonocyte | 3.05e-14 | 59 |
macrophage dendritic cell progenitor | 8.45e-14 | 61 |
myeloid lineage restricted progenitor cell | 8.32e-13 | 66 |
granulocyte monocyte progenitor cell | 1.26e-12 | 67 |
myeloid leukocyte | 8.59e-12 | 72 |
defensive cell | 1.29e-11 | 48 |
phagocyte | 1.29e-11 | 48 |
intestinal epithelial cell | 1.70e-09 | 4 |
myeloid cell | 4.95e-08 | 108 |
common myeloid progenitor | 4.95e-08 | 108 |
nongranular leukocyte | 1.44e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
immature conventional dendritic cell | 8.48e-07 | 5 |
common dendritic progenitor | 8.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.34e-11 | 76 |
bone element | 2.00e-10 | 82 |
skeletal element | 1.52e-09 | 90 |
intestinal mucosa | 1.70e-09 | 4 |
wall of intestine | 1.70e-09 | 4 |
gastrointestinal system mucosa | 1.70e-09 | 4 |
gastrointestinal system epithelium | 1.70e-09 | 4 |
intestinal epithelium | 1.70e-09 | 4 |
immune system | 2.97e-09 | 93 |
hematopoietic system | 8.34e-09 | 98 |
blood island | 8.34e-09 | 98 |
skeletal system | 1.22e-08 | 100 |
hemolymphoid system | 4.95e-08 | 108 |