FFCP PHASE1:Hg19::chr5:14441335..14441346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=407bp_to_ENST00000515710,uc003jfi.1_5end | |association_with_transcript=407bp_to_ENST00000515710,uc003jfi.1_5end | ||
|cluster_id=chr5:14441335..14441346,+ | |||
|coexpression_cluster_id=C950 | |||
|description=CAGE_peak_18_at_TRIO_5end | |description=CAGE_peak_18_at_TRIO_5end | ||
|id=chr5:14441335..14441346,+ | |id=chr5:14441335..14441346,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.00e-11!180;CL:0000057!2.32e-10!75;CL:0002334!2.85e-08!12;CL:0000188!6.63e-08!9;CL:0000680!2.19e-07!57;CL:0000056!2.19e-07!57;CL:0000355!2.19e-07!57;CL:0002620!2.46e-07!23;CL:0000183!9.72e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.00e-11!180;CL:0000057!2.32e-10!75;CL:0002334!2.85e-08!12;CL:0000188!6.63e-08!9;CL:0000680!2.19e-07!57;CL:0000056!2.19e-07!57;CL:0000355!2.19e-07!57;CL:0002620!2.46e-07!23;CL:0000183!9.72e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002582;3.41e-19;3!CL:0002549;6.62e-13;2!CL:0002583;6.62e-13;2!CL:0002334;1.52e-12;12!CL:0002591;2.74e-07;1!CL:0000569;4.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,2.29e-19,3;CL:0002549,5.20e-13,2;CL:0002583,8.99e-13,2;CL:0002334,1.47e-12,12;CL:0000057,3.90e-09,76;CL:0000048,4.19e-08,427;CL:0000723,6.55e-08,433;CL:0000034,1.17e-07,441;CL:0002591,3.84e-07,1;CL:0000569,6.85e-07,4;CL:0000011,6.85e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;4.69e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!5.01e-08!14 | |ontology_enrichment_disease=DOID:2394!5.01e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3371;8.25e-08;1!DOID:4549;8.25e-08;1!DOID:5861;8.25e-08;1!DOID:6496;8.25e-08;1!DOID:2394;4.08e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.10e-08,1;DOID:4549,9.10e-08,1;DOID:5861,9.10e-08,1;DOID:6496,9.10e-08,1;DOID:2394,3.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.60e-11!365;UBERON:0002616!7.08e-10!59;UBERON:0000955!8.38e-10!69;UBERON:0006238!8.38e-10!69;UBERON:0001017!1.49e-09!82;UBERON:0005743!2.20e-09!86;UBERON:0000073!4.28e-09!94;UBERON:0001016!4.28e-09!94;UBERON:0001893!4.44e-09!34;UBERON:0004290!6.28e-09!70;UBERON:0001869!7.84e-09!32;UBERON:0002791!1.55e-08!33;UBERON:0001950!3.37e-08!20;UBERON:0002385!3.57e-08!63;UBERON:0001015!3.57e-08!63;UBERON:0000383!3.57e-08!63;UBERON:0001134!5.10e-08!61;UBERON:0002036!5.10e-08!61;UBERON:0003082!5.10e-08!61;UBERON:0000956!6.25e-08!25;UBERON:0000203!6.25e-08!25;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002780!2.03e-07!41;UBERON:0001890!2.03e-07!41;UBERON:0006240!2.03e-07!41;UBERON:0002619!3.55e-07!22;UBERON:0002020!3.64e-07!34;UBERON:0003528!3.64e-07!34;UBERON:0003080!4.03e-07!42;UBERON:0000992!4.09e-07!13;UBERON:0002118!4.42e-07!5;UBERON:0004532!4.42e-07!5;UBERON:0000914!7.08e-07!83;UBERON:0002329!7.08e-07!83;UBERON:0003077!7.08e-07!83;UBERON:0003059!7.08e-07!83;UBERON:0007282!7.08e-07!83;UBERON:0009618!7.08e-07!83;UBERON:0007285!7.08e-07!83 | |ontology_enrichment_uberon=UBERON:0000475!8.60e-11!365;UBERON:0002616!7.08e-10!59;UBERON:0000955!8.38e-10!69;UBERON:0006238!8.38e-10!69;UBERON:0001017!1.49e-09!82;UBERON:0005743!2.20e-09!86;UBERON:0000073!4.28e-09!94;UBERON:0001016!4.28e-09!94;UBERON:0001893!4.44e-09!34;UBERON:0004290!6.28e-09!70;UBERON:0001869!7.84e-09!32;UBERON:0002791!1.55e-08!33;UBERON:0001950!3.37e-08!20;UBERON:0002385!3.57e-08!63;UBERON:0001015!3.57e-08!63;UBERON:0000383!3.57e-08!63;UBERON:0001134!5.10e-08!61;UBERON:0002036!5.10e-08!61;UBERON:0003082!5.10e-08!61;UBERON:0000956!6.25e-08!25;UBERON:0000203!6.25e-08!25;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002780!2.03e-07!41;UBERON:0001890!2.03e-07!41;UBERON:0006240!2.03e-07!41;UBERON:0002619!3.55e-07!22;UBERON:0002020!3.64e-07!34;UBERON:0003528!3.64e-07!34;UBERON:0003080!4.03e-07!42;UBERON:0000992!4.09e-07!13;UBERON:0002118!4.42e-07!5;UBERON:0004532!4.42e-07!5;UBERON:0000914!7.08e-07!83;UBERON:0002329!7.08e-07!83;UBERON:0003077!7.08e-07!83;UBERON:0003059!7.08e-07!83;UBERON:0007282!7.08e-07!83;UBERON:0009618!7.08e-07!83;UBERON:0007285!7.08e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;6.62e-13;2!UBERON:0005358;6.62e-13;2!UBERON:0001886;6.62e-13;2!UBERON:0004086;6.62e-13;2!UBERON:0005282;6.62e-13;2!UBERON:0005281;6.62e-13;2!UBERON:0002118;1.31e-11;5!UBERON:0002072;2.61e-11;5!UBERON:0000992;1.17e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,5.20e-13,2;UBERON:0005358,5.20e-13,2;UBERON:0001886,5.20e-13,2;UBERON:0004086,5.20e-13,2;UBERON:0005282,5.20e-13,2;UBERON:0005281,5.20e-13,2;UBERON:0002118,8.67e-12,5;UBERON:0002072,3.30e-11,5;UBERON:0000992,8.83e-08,13 | |||
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| ||
|short_description=p18@TRIO | |short_description=p18@TRIO | ||
}} | }} |
Latest revision as of 19:26, 15 September 2015
Short description: | p18@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | 407bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 2.29e-19 | 3 |
fibroblast of choroid plexus | 5.20e-13 | 2 |
subcutaneous preadipocyte | 8.99e-13 | 2 |
preadipocyte | 1.47e-12 | 12 |
fibroblast | 3.90e-09 | 76 |
multi fate stem cell | 4.19e-08 | 427 |
somatic stem cell | 6.55e-08 | 433 |
stem cell | 1.17e-07 | 441 |
smooth muscle cell of the pulmonary artery | 3.84e-07 | 1 |
cardiac mesenchymal cell | 6.85e-07 | 4 |
migratory trunk neural crest cell | 6.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 5.20e-13 | 2 |
ventricle of nervous system | 5.20e-13 | 2 |
choroid plexus | 5.20e-13 | 2 |
brain ventricle | 5.20e-13 | 2 |
ventricular system of brain | 5.20e-13 | 2 |
ventricular system of central nervous system | 5.20e-13 | 2 |
right ovary | 8.67e-12 | 5 |
hypodermis | 3.30e-11 | 5 |
female gonad | 8.83e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.10e-08 | 1 |
extraosseous chondrosarcoma | 9.10e-08 | 1 |
myxoid chondrosarcoma | 9.10e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 9.10e-08 | 1 |
ovarian cancer | 3.14e-07 | 14 |