FFCP PHASE1:Hg19::chr9:131186466..131186485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51148 | |EntrezGene=51148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23723 | |HGNC=23723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483893_5end | |association_with_transcript=0bp_to_ENST00000483893_5end | ||
|cluster_id=chr9:131186466..131186485,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_7_at_CERCAM_5end | |description=CAGE_peak_7_at_CERCAM_5end | ||
|id=chr9:131186466..131186485,+ | |id=chr9:131186466..131186485,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.57e-19!180;CL:0000057!4.87e-14!75;CL:0000183!1.68e-10!59;CL:0000680!3.55e-10!57;CL:0000056!3.55e-10!57;CL:0000355!3.55e-10!57;CL:0000187!1.70e-09!54;CL:0000192!3.15e-08!42;CL:0000514!3.15e-08!42;CL:0000222!1.27e-07!119;CL:0002334!1.99e-07!12;CL:0000359!3.11e-07!32;CL:0000393!3.38e-07!60;CL:0000211!3.38e-07!60 | |ontology_enrichment_celltype=CL:0000055!9.57e-19!180;CL:0000057!4.87e-14!75;CL:0000183!1.68e-10!59;CL:0000680!3.55e-10!57;CL:0000056!3.55e-10!57;CL:0000355!3.55e-10!57;CL:0000187!1.70e-09!54;CL:0000192!3.15e-08!42;CL:0000514!3.15e-08!42;CL:0000222!1.27e-07!119;CL:0002334!1.99e-07!12;CL:0000359!3.11e-07!32;CL:0000393!3.38e-07!60;CL:0000211!3.38e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.05e-10;12!CL:0000134;1.73e-08;55!CL:0000349;3.79e-08;19!CL:0000723;1.06e-07;61!CL:0000048;1.82e-07;58!CL:0000136;2.92e-07;13!CL:0000034;4.09e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.08e-15,76;CL:0000048,1.07e-10,427;CL:0000723,3.96e-10,433;CL:0002334,5.56e-10,12;CL:0000034,2.10e-09,441;CL:0000136,4.91e-09,15;CL:0000349,2.11e-08,19;CL:0002320,1.74e-07,361;CL:0000134,9.50e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.22e-07!14 | |ontology_enrichment_disease=DOID:2394!1.22e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.80e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.13e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.15e-12!83;UBERON:0002329!6.15e-12!83;UBERON:0003077!6.15e-12!83;UBERON:0003059!6.15e-12!83;UBERON:0007282!6.15e-12!83;UBERON:0009618!6.15e-12!83;UBERON:0007285!6.15e-12!83;UBERON:0000486!1.80e-11!82;UBERON:0004290!8.23e-11!70;UBERON:0000475!8.39e-11!365;UBERON:0005256!5.50e-10!143;UBERON:0001134!7.61e-10!61;UBERON:0002036!7.61e-10!61;UBERON:0003082!7.61e-10!61;UBERON:0002385!9.24e-10!63;UBERON:0001015!9.24e-10!63;UBERON:0000383!9.24e-10!63;UBERON:0004872!1.19e-08!84;UBERON:0002100!1.03e-07!216;UBERON:0000468!1.35e-07!659;UBERON:0001637!1.98e-07!42;UBERON:0003509!1.98e-07!42;UBERON:0004572!1.98e-07!42;UBERON:0000483!2.19e-07!309;UBERON:0004573!3.95e-07!33;UBERON:0004571!3.95e-07!33;UBERON:0004923!4.69e-07!57;UBERON:0000119!4.72e-07!312;UBERON:0002199!7.31e-07!45;UBERON:0002416!7.31e-07!45;UBERON:0005631!9.39e-07!14;UBERON:0000158!9.39e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!6.15e-12!83;UBERON:0002329!6.15e-12!83;UBERON:0003077!6.15e-12!83;UBERON:0003059!6.15e-12!83;UBERON:0007282!6.15e-12!83;UBERON:0009618!6.15e-12!83;UBERON:0007285!6.15e-12!83;UBERON:0000486!1.80e-11!82;UBERON:0004290!8.23e-11!70;UBERON:0000475!8.39e-11!365;UBERON:0005256!5.50e-10!143;UBERON:0001134!7.61e-10!61;UBERON:0002036!7.61e-10!61;UBERON:0003082!7.61e-10!61;UBERON:0002385!9.24e-10!63;UBERON:0001015!9.24e-10!63;UBERON:0000383!9.24e-10!63;UBERON:0004872!1.19e-08!84;UBERON:0002100!1.03e-07!216;UBERON:0000468!1.35e-07!659;UBERON:0001637!1.98e-07!42;UBERON:0003509!1.98e-07!42;UBERON:0004572!1.98e-07!42;UBERON:0000483!2.19e-07!309;UBERON:0004573!3.95e-07!33;UBERON:0004571!3.95e-07!33;UBERON:0004923!4.69e-07!57;UBERON:0000119!4.72e-07!312;UBERON:0002199!7.31e-07!45;UBERON:0002416!7.31e-07!45;UBERON:0005631!9.39e-07!14;UBERON:0000158!9.39e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.45e-09;9!UBERON:0000042;3.45e-09;9!UBERON:0001013;5.04e-09;14!UBERON:0005631;1.34e-08;10!UBERON:0000158;1.34e-08;10!UBERON:0003688;4.34e-08;6!UBERON:0002358;4.34e-08;6!UBERON:0003684;4.34e-08;6!UBERON:0001178;4.34e-08;6!UBERON:0002199;5.17e-07;46!UBERON:0002416;5.17e-07;46!UBERON:0000478;5.28e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.22e-09,46;UBERON:0002416,1.22e-09,46;UBERON:0001013,3.66e-09,14;UBERON:0005631,4.77e-09,14;UBERON:0000158,4.77e-09,14;UBERON:0003102,2.61e-08,99;UBERON:0004923,2.94e-08,66;UBERON:0003688,3.86e-08,6;UBERON:0002358,3.86e-08,6;UBERON:0003684,3.86e-08,6;UBERON:0001178,3.86e-08,6;UBERON:0000486,8.14e-08,83;UBERON:0003077,1.14e-07,72;UBERON:0007285,1.14e-07,72;UBERON:0007503,1.50e-07,78;UBERON:0002384,1.69e-07,371;UBERON:0007524,1.87e-07,73;UBERON:0002329,3.32e-07,71;UBERON:0003059,3.32e-07,71;UBERON:0007282,3.32e-07,71;UBERON:0004290,3.32e-07,71;UBERON:0009618,3.32e-07,71;UBERON:0000478,3.32e-07,24;UBERON:0004871,5.10e-07,8;UBERON:0000926,6.45e-07,315;UBERON:0004120,6.45e-07,315;UBERON:0006603,6.45e-07,315 | |||
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| ||
|short_description=p7@CERCAM | |short_description=p7@CERCAM | ||
}} | }} |
Latest revision as of 19:36, 15 September 2015
Short description: | p7@CERCAM |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CERCAM_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_ENST00000483893_5end |
EntrezGene: | CERCAM |
HGNC: | 23723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.08e-15 | 76 |
multi fate stem cell | 1.07e-10 | 427 |
somatic stem cell | 3.96e-10 | 433 |
preadipocyte | 5.56e-10 | 12 |
stem cell | 2.10e-09 | 441 |
fat cell | 4.91e-09 | 15 |
extraembryonic cell | 2.11e-08 | 19 |
connective tissue cell | 1.74e-07 | 361 |
mesenchymal cell | 9.50e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
integument | 1.22e-09 | 46 |
integumental system | 1.22e-09 | 46 |
adipose tissue | 3.66e-09 | 14 |
extraembryonic membrane | 4.77e-09 | 14 |
membranous layer | 4.77e-09 | 14 |
surface structure | 2.61e-08 | 99 |
organ component layer | 2.94e-08 | 66 |
omentum | 3.86e-08 | 6 |
peritoneum | 3.86e-08 | 6 |
abdominal cavity | 3.86e-08 | 6 |
visceral peritoneum | 3.86e-08 | 6 |
multilaminar epithelium | 8.14e-08 | 83 |
paraxial mesoderm | 1.14e-07 | 72 |
presumptive paraxial mesoderm | 1.14e-07 | 72 |
epithelial vesicle | 1.50e-07 | 78 |
connective tissue | 1.69e-07 | 371 |
dense mesenchyme tissue | 1.87e-07 | 73 |
somite | 3.32e-07 | 71 |
presomitic mesoderm | 3.32e-07 | 71 |
presumptive segmental plate | 3.32e-07 | 71 |
dermomyotome | 3.32e-07 | 71 |
trunk paraxial mesoderm | 3.32e-07 | 71 |
extraembryonic structure | 3.32e-07 | 24 |
somatic layer of lateral plate mesoderm | 5.10e-07 | 8 |
mesoderm | 6.45e-07 | 315 |
mesoderm-derived structure | 6.45e-07 | 315 |
presumptive mesoderm | 6.45e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.13e-09 | 14 |