FFCP PHASE1:Hg19::chr7:117120070..117120087,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1080 | |EntrezGene=1080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1884 | |HGNC=1884 | ||
|TSSclassifier=strong | |||
|UniProt=P13569 | |UniProt=P13569 | ||
|association_with_transcript=53bp_to_ENST00000003084,ENST00000454343,NM_000492,uc003vjd.2,uc011knq.1_5end | |association_with_transcript=53bp_to_ENST00000003084,ENST00000454343,NM_000492,uc003vjd.2,uc011knq.1_5end | ||
|cluster_id=chr7:117120070..117120087,+ | |||
|description=CAGE_peak_1_at_CFTR_5end | |description=CAGE_peak_1_at_CFTR_5end | ||
|id=chr7:117120070..117120087,+ | |id=chr7:117120070..117120087,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.12e-08!5 | |ontology_enrichment_celltype=CL:0002322!5.12e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.99e-09;4!CL:0002195;1.90e-07;2!CL:0002571;1.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.06e-09,4;CL:0002195,1.84e-07,2;CL:0002571,1.84e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.34e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.34e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.22e-19!27;UBERON:0005409!2.33e-19!35;UBERON:0004921!5.16e-18!129;UBERON:0004185!5.16e-18!129;UBERON:0000059!1.28e-15!11;UBERON:0001007!2.45e-15!155;UBERON:0001555!2.45e-15!155;UBERON:0007026!2.45e-15!155;UBERON:0004119!1.35e-13!169;UBERON:0000925!1.35e-13!169;UBERON:0006595!1.35e-13!169;UBERON:0001155!1.22e-12!9;UBERON:0007023!1.51e-09!115;UBERON:0000077!1.99e-09!130;UBERON:0003929!1.53e-07!54;UBERON:0000481!9.84e-07!347 | |ontology_enrichment_uberon=UBERON:0000160!1.22e-19!27;UBERON:0005409!2.33e-19!35;UBERON:0004921!5.16e-18!129;UBERON:0004185!5.16e-18!129;UBERON:0000059!1.28e-15!11;UBERON:0001007!2.45e-15!155;UBERON:0001555!2.45e-15!155;UBERON:0007026!2.45e-15!155;UBERON:0004119!1.35e-13!169;UBERON:0000925!1.35e-13!169;UBERON:0006595!1.35e-13!169;UBERON:0001155!1.22e-12!9;UBERON:0007023!1.51e-09!115;UBERON:0000077!1.99e-09!130;UBERON:0003929!1.53e-07!54;UBERON:0000481!9.84e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.65e-36;22!UBERON:0000160;1.70e-36;17!UBERON:0004921;1.07e-32;33!UBERON:0000059;6.70e-25;11!UBERON:0001155;4.19e-19;9!UBERON:0001007;7.52e-12;81!UBERON:0004907;1.09e-11;5!UBERON:0001555;1.16e-11;54!UBERON:0001242;4.99e-09;4!UBERON:0001262;4.99e-09;4!UBERON:0004786;4.99e-09;4!UBERON:0004808;4.99e-09;4!UBERON:0001277;4.99e-09;4!UBERON:0000922;5.82e-09;49!UBERON:0001052;1.54e-08;4!UBERON:0002108;1.99e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.30e-36,17;UBERON:0005409,9.61e-32,25;UBERON:0000059,9.05e-25,11;UBERON:0004921,2.08e-22,118;UBERON:0001007,1.24e-19,145;UBERON:0001555,1.24e-19,145;UBERON:0007026,1.24e-19,145;UBERON:0001155,4.74e-19,9;UBERON:0004119,5.06e-17,160;UBERON:0000925,5.06e-17,160;UBERON:0006595,5.06e-17,160;UBERON:0004907,1.29e-11,5;UBERON:0001242,5.06e-09,4;UBERON:0001262,5.06e-09,4;UBERON:0004786,5.06e-09,4;UBERON:0004808,5.06e-09,4;UBERON:0001277,5.06e-09,4;UBERON:0011216,6.51e-09,223;UBERON:0001052,1.80e-08,4;UBERON:0002108,1.99e-07,4;UBERON:0003929,8.50e-07,54 | |||
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| ||
|short_description=p1@CFTR | |short_description=p1@CFTR | ||
}} | }} |
Latest revision as of 19:44, 15 September 2015
Short description: | p1@CFTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CFTR_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000003084, ENST00000454343, NM_000492, uc003vjd.2, uc011knq.1_5end |
EntrezGene: | CFTR |
HGNC: | 1884 |
UniProt: | P13569 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.06e-09 | 4 |
hepatic stem cell | 1.84e-07 | 2 |
hepatic mesenchymal stem cell | 1.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.30e-36 | 17 |
gastrointestinal system | 9.61e-32 | 25 |
large intestine | 9.05e-25 | 11 |
subdivision of digestive tract | 2.08e-22 | 118 |
digestive system | 1.24e-19 | 145 |
digestive tract | 1.24e-19 | 145 |
primitive gut | 1.24e-19 | 145 |
colon | 4.74e-19 | 9 |
endoderm-derived structure | 5.06e-17 | 160 |
endoderm | 5.06e-17 | 160 |
presumptive endoderm | 5.06e-17 | 160 |
lower digestive tract | 1.29e-11 | 5 |
intestinal mucosa | 5.06e-09 | 4 |
wall of intestine | 5.06e-09 | 4 |
gastrointestinal system mucosa | 5.06e-09 | 4 |
gastrointestinal system epithelium | 5.06e-09 | 4 |
intestinal epithelium | 5.06e-09 | 4 |
organ system subdivision | 6.51e-09 | 223 |
rectum | 1.80e-08 | 4 |
small intestine | 1.99e-07 | 4 |
gut epithelium | 8.50e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.34e-08 | 2 |