FFCP PHASE1:Hg19::chrX:48815083..48815095,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:48815083..48815095,- to FFCP PHASE1:Hg19::chrX:48815083..48815095,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55593 | |EntrezGene=55593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25402 | |HGNC=25402 | ||
|TSSclassifier=strong | |||
|UniProt=Q96G74,G5E9D7 | |UniProt=Q96G74,G5E9D7 | ||
|association_with_transcript=-190bp_to_ENST00000156084,ENST00000396743,NM_001136157,NM_001136158,NM_017602,uc004dlt.3,uc004dlu.2,uc004dlv.2_5end | |||
|cluster_id=chrX:48815083..48815095,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_OTUD5_5end | |||
|id=chrX:48815083..48815095,- | |||
|ontology_enrichment_celltype=CL:0002057!5.89e-20!42;CL:0000860!1.39e-19!45;CL:0000738!3.68e-19!140;CL:0002032!2.69e-18!165;CL:0000837!2.69e-18!165;CL:0000037!7.96e-18!172;CL:0000566!7.96e-18!172;CL:0000988!8.75e-18!182;CL:0002031!5.79e-17!124;CL:0002087!1.81e-16!119;CL:0000766!3.48e-14!76;CL:0000763!3.41e-13!112;CL:0000049!3.41e-13!112;CL:0000557!2.40e-12!71;CL:0000839!5.56e-12!70;CL:0002009!1.28e-11!65;CL:0002194!7.20e-11!63;CL:0000576!7.20e-11!63;CL:0000040!7.20e-11!63;CL:0000559!7.20e-11!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-30;33!CL:0002057;2.00e-30;33!CL:0000473;5.19e-20;39!CL:0000234;5.19e-20;39!CL:0000576;1.42e-19;48!CL:0000766;7.96e-16;69!CL:0002087;9.21e-12;104!CL:0000763;1.34e-09;100!CL:0000094;5.92e-09;8!CL:0000738;1.93e-08;136!CL:0000081;2.21e-08;11!CL:0000988;1.42e-07;177!CL:0000775;4.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.43e-40,42;CL:0002057,4.43e-40,42;CL:0000473,1.25e-33,48;CL:0000234,1.25e-33,48;CL:0000738,8.47e-33,136;CL:0000988,1.22e-31,177;CL:0000037,2.67e-30,168;CL:0000766,4.70e-30,72;CL:0002087,7.50e-29,115;CL:0002032,7.80e-29,161;CL:0000837,7.80e-29,161;CL:0002031,3.90e-28,120;CL:0002009,2.32e-25,61;CL:0000839,3.26e-25,66;CL:0000557,5.77e-25,67;CL:0000763,1.15e-24,108;CL:0000049,1.15e-24,108;CL:0002194,1.16e-24,59;CL:0000576,1.16e-24,59;CL:0000040,1.16e-24,59;CL:0000559,1.16e-24,59;CL:0000094,6.08e-09,8;CL:0000134,1.42e-08,354;CL:0000081,2.29e-08,11;CL:0002393,4.07e-08,9;CL:0002397,4.07e-08,9;CL:0002320,4.66e-08,361;CL:0000775,4.91e-07,3;CL:0000624,6.76e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-28;42!CL:0000049;1.26e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-18!102;UBERON:0003061!1.71e-18!102;UBERON:0002193!6.47e-16!112;UBERON:0002371!1.91e-10!80;UBERON:0000178!4.63e-10!15;UBERON:0000179!4.63e-10!15;UBERON:0000463!4.63e-10!15;UBERON:0001474!6.16e-10!86;UBERON:0003081!1.55e-08!216;UBERON:0004765!9.99e-08!101;UBERON:0001434!9.99e-08!101;UBERON:0002405!1.36e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-20;15!UBERON:0000179;3.93e-20;15!UBERON:0000463;3.93e-20;15!UBERON:0002390;1.97e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-33,98;UBERON:0003061,1.16e-33,98;UBERON:0002193,4.62e-29,108;UBERON:0002371,1.10e-20,76;UBERON:0000178,1.49e-20,15;UBERON:0000179,1.49e-20,15;UBERON:0000463,1.49e-20,15;UBERON:0001474,2.29e-18,82;UBERON:0002405,5.89e-16,93;UBERON:0004765,8.94e-16,90;UBERON:0001434,4.46e-14,100;UBERON:0003081,2.63e-12,203;UBERON:0002384,2.31e-07,371 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0,0.0787107813136792,3.54027849164014,0,0.928896739896456,0,0,0.369754010166788,0.46480320348181,0,0,0,1.40381113229099,0.868043482863407,0.223915474239924,0,0,1.01778767145695,3.40088349319928,2.91100873425379,1.39457422143411,2.87817521615278,2.78735733805593,1.7261543539329,2.0492856522328,2.60130452877444,2.75796544589295,3.22742341791913,0,2.07066573496865,1.91034305040492,2.24723484445085,3.06083892370903,3.53021929783703,5.75403413219137,1.31940520074686,1.99463657621632,4.26224750532694,1.16083695451434,1.70215567407342,1.86846674698672,2.51248665256743,0.521482918420201,1.52032191293582,2.42159801053347,1.47311054395026,1.26584954976354,2.74631872205524,1.70083439972035,1.46761051855863,0.898629049171961,0.901061357049038,0.803627933485401,1.99508920618874,2.38700012638908,1.64397738388171,0,1.09227722252426,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,3.41527781465669,4.11066032559657,2.6759125968766,2.64342657158052,1.68152568894461,0,1.57367816091066,2.75107533924415,3.49522548299166,2.34061093546949,1.30368906653436,0.946895611469467,3.89653456815823,2.45103005147382,0.883817722424512,1.77227115666897,1.89562704635511,3.84273959177025,3.90178042679635,1.31550323682941,3.59255023121603,1.15921234294021,0.14828656316206,0.535081656179426,1.04535523804977,0.453237370790265,1.53288197440768,1.03088233644789,2.27717722817553,0.637130828648193,0.651083453856419,0,0.451725357233318,0.127986611154418,1.24930726552346,0.710331756132051,0,2.62088766192152,2.40696176205157,0.868946423296794,0,2.01210257911091,0.12786256184353,0,0,0.434539556882471,0.795285947051099,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0.364295288292542,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0.198762407366705,0,0,0,1.67799774483962,0.550236083880135,0.835979866147242,0,0,0,0.402829317109147,0.760272105718513,1.70843440283719,0.367663080345869,0.81014194788176,0.535798369704479,0,0.225222960966644,0,0.949265659568129,0,15.8136500923276,19.3890132074163,0,0,0.12663051166458,0.397227542439656,0.860509862246441,0.354668382198357,0,1.06748995729705,0.98667019366864,0,0.134710672069688,0.163461903113459,0.605429710579726,1.15235184896,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,0,0,1.18800285728205,0,0.910161361938026,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0.193260853163297,0.545492241181669,0.286804595389004,0.487894824518382,0,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0,0,0.928735856063958,2.16563844500876,1.18306800039844,0.168584690078102,0.241011029883482,0.661763836394364,0.217879444092406,0.949082476444386,0.943819157121151,1.17732879075208,1.15424147083917,0.738155454624648,0,0,1.47008711385542,0,0,1.18157981336281,0,0.491953754172454,0,0.658501712451753,0,0.301586917234893,0.185176890317059,0,0,0,0,0.352226082707465,0.288732895522148,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0,0,0.264145302039678,0.829312462163088,1.15295962733569,0.75745460055828,0.190493682876507,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,2.95546140302891,1.50939302401662,2.69520376187472,0,1.30139853857622,0,0.167516265334349,0,14.2311334549965,17.9496875522415,7.87389475528467,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,1.44737618286021,1.94142780736755,2.34800627167578,0.909382714338778,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,1.06537035187876,0.164254312027618,0,0.464841513839837,0.725156697549733,1.00253235151642,0.184161977871793,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,1.46139224653261,0.316654886678627,1.13733384070897,0.340187410553031,0.647747748306418,0,0,0.501689773854853,0.509752546090077,0,0,1.09629938322967,1.5686127061494,0,0,0.650756789328606,0.515205058238611,0.183138929636687,0.247528499761764,0,0,0,0.48335359146061,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0.826424576804891,0,0.382838137483752,0.2023155617111,0.929691098594572,0.94443704049192,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.4293746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| |phase1_expression=0.181678379270557,0,0.704772020479856,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0,0.0787107813136792,3.54027849164014,0,0.928896739896456,0,0,0.369754010166788,0.46480320348181,0,0,0,1.40381113229099,0.868043482863407,0.223915474239924,0,0,1.01778767145695,3.40088349319928,2.91100873425379,1.39457422143411,2.87817521615278,2.78735733805593,1.7261543539329,2.0492856522328,2.60130452877444,2.75796544589295,3.22742341791913,0,2.07066573496865,1.91034305040492,2.24723484445085,3.06083892370903,3.53021929783703,5.75403413219137,1.31940520074686,1.99463657621632,4.26224750532694,1.16083695451434,1.70215567407342,1.86846674698672,2.51248665256743,0.521482918420201,1.52032191293582,2.42159801053347,1.47311054395026,1.26584954976354,2.74631872205524,1.70083439972035,1.46761051855863,0.898629049171961,0.901061357049038,0.803627933485401,1.99508920618874,2.38700012638908,1.64397738388171,0,1.09227722252426,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,3.41527781465669,4.11066032559657,2.6759125968766,2.64342657158052,1.68152568894461,0,1.57367816091066,2.75107533924415,3.49522548299166,2.34061093546949,1.30368906653436,0.946895611469467,3.89653456815823,2.45103005147382,0.883817722424512,1.77227115666897,1.89562704635511,3.84273959177025,3.90178042679635,1.31550323682941,3.59255023121603,1.15921234294021,0.14828656316206,0.535081656179426,1.04535523804977,0.453237370790265,1.53288197440768,1.03088233644789,2.27717722817553,0.637130828648193,0.651083453856419,0,0.451725357233318,0.127986611154418,1.24930726552346,0.710331756132051,0,2.62088766192152,2.40696176205157,0.868946423296794,0,2.01210257911091,0.12786256184353,0,0,0.434539556882471,0.795285947051099,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0.364295288292542,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0.198762407366705,0,0,0,1.67799774483962,0.550236083880135,0.835979866147242,0,0,0,0.402829317109147,0.760272105718513,1.70843440283719,0.367663080345869,0.81014194788176,0.535798369704479,0,0.225222960966644,0,0.949265659568129,0,15.8136500923276,19.3890132074163,0,0,0.12663051166458,0.397227542439656,0.860509862246441,0.354668382198357,0,1.06748995729705,0.98667019366864,0,0.134710672069688,0.163461903113459,0.605429710579726,1.15235184896,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,0,0,1.18800285728205,0,0.910161361938026,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0.193260853163297,0.545492241181669,0.286804595389004,0.487894824518382,0,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0,0,0.928735856063958,2.16563844500876,1.18306800039844,0.168584690078102,0.241011029883482,0.661763836394364,0.217879444092406,0.949082476444386,0.943819157121151,1.17732879075208,1.15424147083917,0.738155454624648,0,0,1.47008711385542,0,0,1.18157981336281,0,0.491953754172454,0,0.658501712451753,0,0.301586917234893,0.185176890317059,0,0,0,0,0.352226082707465,0.288732895522148,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0,0,0.264145302039678,0.829312462163088,1.15295962733569,0.75745460055828,0.190493682876507,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,2.95546140302891,1.50939302401662,2.69520376187472,0,1.30139853857622,0,0.167516265334349,0,14.2311334549965,17.9496875522415,7.87389475528467,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,1.44737618286021,1.94142780736755,2.34800627167578,0.909382714338778,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,1.06537035187876,0.164254312027618,0,0.464841513839837,0.725156697549733,1.00253235151642,0.184161977871793,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,1.46139224653261,0.316654886678627,1.13733384070897,0.340187410553031,0.647747748306418,0,0,0.501689773854853,0.509752546090077,0,0,1.09629938322967,1.5686127061494,0,0,0.650756789328606,0.515205058238611,0.183138929636687,0.247528499761764,0,0,0,0.48335359146061,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0.826424576804891,0,0.382838137483752,0.2023155617111,0.929691098594572,0.94443704049192,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.4293746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| ||
|short_description=p8@OTUD5 | |||
}} | }} |
Latest revision as of 20:28, 15 September 2015
Short description: | p8@OTUD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_OTUD5_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -190bp_to_ENST00000156084, ENST00000396743, NM_001136157, NM_001136158, NM_017602, uc004dlt.3, uc004dlu.2, uc004dlv.2_5end |
EntrezGene: | OTUD5 |
HGNC: | 25402 |
UniProt: | Q96G74G5E9D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.43e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.43e-40 | 42 |
defensive cell | 1.25e-33 | 48 |
phagocyte | 1.25e-33 | 48 |
leukocyte | 8.47e-33 | 136 |
hematopoietic cell | 1.22e-31 | 177 |
hematopoietic stem cell | 2.67e-30 | 168 |
myeloid leukocyte | 4.70e-30 | 72 |
nongranular leukocyte | 7.50e-29 | 115 |
hematopoietic oligopotent progenitor cell | 7.80e-29 | 161 |
hematopoietic multipotent progenitor cell | 7.80e-29 | 161 |
hematopoietic lineage restricted progenitor cell | 3.90e-28 | 120 |
macrophage dendritic cell progenitor | 2.32e-25 | 61 |
myeloid lineage restricted progenitor cell | 3.26e-25 | 66 |
granulocyte monocyte progenitor cell | 5.77e-25 | 67 |
myeloid cell | 1.15e-24 | 108 |
common myeloid progenitor | 1.15e-24 | 108 |
monopoietic cell | 1.16e-24 | 59 |
monocyte | 1.16e-24 | 59 |
monoblast | 1.16e-24 | 59 |
promonocyte | 1.16e-24 | 59 |
granulocyte | 6.08e-09 | 8 |
mesenchymal cell | 1.42e-08 | 354 |
blood cell | 2.29e-08 | 11 |
intermediate monocyte | 4.07e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.07e-08 | 9 |
connective tissue cell | 4.66e-08 | 361 |
neutrophil | 4.91e-07 | 3 |
CD4-positive, alpha-beta T cell | 6.76e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-33 | 98 |
blood island | 1.16e-33 | 98 |
hemolymphoid system | 4.62e-29 | 108 |
bone marrow | 1.10e-20 | 76 |
blood | 1.49e-20 | 15 |
haemolymphatic fluid | 1.49e-20 | 15 |
organism substance | 1.49e-20 | 15 |
bone element | 2.29e-18 | 82 |
immune system | 5.89e-16 | 93 |
skeletal element | 8.94e-16 | 90 |
skeletal system | 4.46e-14 | 100 |
lateral plate mesoderm | 2.63e-12 | 203 |
connective tissue | 2.31e-07 | 371 |