FFCP PHASE1:Hg19::chr1:109633445..109633450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56900 | |EntrezGene=56900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30187 | |HGNC=30187 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000473828_5end | |association_with_transcript=17bp_to_ENST00000473828_5end | ||
|cluster_id=chr1:109633445..109633450,+ | |||
|description=CAGE_peak_2_at_TMEM167B_5end | |description=CAGE_peak_2_at_TMEM167B_5end | ||
|id=chr1:109633445..109633450,+ | |id=chr1:109633445..109633450,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.56e-13!112;CL:0000049!4.56e-13!112;CL:0000766!4.68e-13!76;CL:0000557!4.20e-12!71;CL:0000839!2.13e-11!70;CL:0002009!1.86e-10!65;CL:0002194!1.28e-09!63;CL:0000576!1.28e-09!63;CL:0000040!1.28e-09!63;CL:0000559!1.28e-09!63;CL:0000037!2.47e-09!172;CL:0000566!2.47e-09!172;CL:0002057!6.06e-09!42;CL:0000738!7.85e-09!140;CL:0002032!4.90e-08!165;CL:0000837!4.90e-08!165;CL:0000988!7.91e-08!182;CL:0000860!1.65e-07!45 | |ontology_enrichment_celltype=CL:0000763!4.56e-13!112;CL:0000049!4.56e-13!112;CL:0000766!4.68e-13!76;CL:0000557!4.20e-12!71;CL:0000839!2.13e-11!70;CL:0002009!1.86e-10!65;CL:0002194!1.28e-09!63;CL:0000576!1.28e-09!63;CL:0000040!1.28e-09!63;CL:0000559!1.28e-09!63;CL:0000037!2.47e-09!172;CL:0000566!2.47e-09!172;CL:0002057!6.06e-09!42;CL:0000738!7.85e-09!140;CL:0002032!4.90e-08!165;CL:0000837!4.90e-08!165;CL:0000988!7.91e-08!182;CL:0000860!1.65e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000766;1.01e-10;69!CL:0000473;2.83e-10;39!CL:0000234;2.83e-10;39!CL:0000097;8.69e-10;5!CL:0000860;1.66e-08;33!CL:0002057;1.66e-08;33!CL:0000763;2.07e-07;100!CL:0000576;6.78e-07;48 | |ontology_enrichment_celltype_v019=CL:0000766;1.01e-10;69!CL:0000473;2.83e-10;39!CL:0000234;2.83e-10;39!CL:0000097;8.69e-10;5!CL:0000860;1.66e-08;33!CL:0002057;1.66e-08;33!CL:0000763;2.07e-07;100!CL:0000576;6.78e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.68e-19,72;CL:0000557,1.06e-17,67;CL:0000763,1.90e-17,108;CL:0000049,1.90e-17,108;CL:0000839,3.32e-16,66;CL:0000473,6.63e-14,48;CL:0000234,6.63e-14,48;CL:0002009,8.26e-13,61;CL:0000738,3.62e-12,136;CL:0000037,4.10e-12,168;CL:0002032,4.90e-12,161;CL:0000837,4.90e-12,161;CL:0002194,9.41e-12,59;CL:0000576,9.41e-12,59;CL:0000040,9.41e-12,59;CL:0000559,9.41e-12,59;CL:0000988,4.42e-11,177;CL:0000860,9.43e-11,42;CL:0002057,9.43e-11,42;CL:0000097,2.18e-10,5;CL:0002028,2.18e-10,5;CL:0002031,2.98e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;8.40e-09;42 | |ontology_enrichment_development_v019=CL:0002057;8.40e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.32e-10!86;UBERON:0004765!1.27e-09!101;UBERON:0001434!1.27e-09!101;UBERON:0002371!1.33e-09!80;UBERON:0002193!4.24e-08!112;UBERON:0002405!1.28e-07!115;UBERON:0002390!1.52e-07!102;UBERON:0003061!1.52e-07!102 | |ontology_enrichment_uberon=UBERON:0001474!3.32e-10!86;UBERON:0004765!1.27e-09!101;UBERON:0001434!1.27e-09!101;UBERON:0002371!1.33e-09!80;UBERON:0002193!4.24e-08!112;UBERON:0002405!1.28e-07!115;UBERON:0002390!1.52e-07!102;UBERON:0003061!1.52e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.22e-15,76;UBERON:0001474,1.99e-13,82;UBERON:0002405,1.82e-12,93;UBERON:0004765,9.71e-12,90;UBERON:0002390,2.04e-11,98;UBERON:0003061,2.04e-11,98;UBERON:0002193,5.97e-11,108;UBERON:0001434,5.11e-10,100 | |||
|phase1_expression=0.726713517082227,0,0.845726424575827,2.00146596706261,1.34088328328186,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0.547497700291537,0.125542639594803,0,0.246301768349837,0.157421562627358,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0,0,0.426507697462265,0.880801318004542,0,0.601633342410425,0,0.895661896959697,0.32389366601898,0.77272670290256,1.30858414901608,0.377875943688809,0.970336244751265,0.929716147622738,0.411167888021826,1.85823822537062,1.7261543539329,1.2808035326455,0.47296445977717,1.72372840368309,1.29096936716765,0,1.31769637679823,0.272906150057846,0.898893937780338,0.918251677112708,0.320929027076094,0,0.989553900560148,1.39624560335142,0.852449501065388,0.580418477257168,1.13477044938228,0,1.25624332628372,0.521482918420201,1.3031330682307,0,0.736555271975129,0,1.26753171787165,0.425208599930087,1.04829322754188,0.561643155732475,0.600707571366025,0.803627933485401,0.285012743741249,1.39241674039363,0.365328307529268,1.75996244461323,0,0,0,0.800791974072025,0.574752439954483,1.32208974556972,0,0,0,0.382273228125229,0,2.24203425192614,0.263384084775077,0,1.17903228824749,0.822405995998037,0.668745981562712,0,0,0,0.891283655081389,0,0,0,0.25618263945135,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.434539556882471,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0.649094787309367,1.39303789839414,0.930705723632056,0,0.571994910780128,1.11437250398869,0.39752481473341,0,0,0,0,0.825354125820202,0,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0,1.10298924103761,0,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,1.31780417436063,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.567160915800105,0,0.427114777637135,0,0,0.618315175430633,0,0.558350568994769,0.168776332241266,0.389748020644795,0.252433774244115,0.460249493211497,0.646584227275248,0,0.503760491138201,0,0.193260853163297,0,0,0.121973706129595,0.662648841607426,0.464775771478074,0.621966330092223,1.00928340350251,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0.482022059766964,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0.368965315629341,0.514703430895577,0.439001141634502,0,0,0.277765335475589,0,0,0,0,0.352226082707465,0.577465791044295,0,0.380508304469197,0,0,0.738651018262192,1.40402559083543,0.148631162288728,0.93733833986777,0,0.141775097242386,0.268675568108545,0.290633938513962,0,1.97065295158377,0.528290604079356,1.4512968087854,1.8735593944205,1.2624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0,0,0.266422179016099,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,2.43247561282381,1.00451418286425,0,0.479249710983165,0,0,0.579125226670317,0,0.358121926479791,0.224170287987055,0.394061520403854,0.215627574859517,0.898401253958239,0,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,1.24324654030811,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0.260650843404249,0.195801157462741,0,0.620304078368662,0.215714200818617,0.640365346820666,0.303127571446259,1.66435439510497,0,0.744323423456331,0.460385919864187,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0.325378394664303,0.515205058238611,0.0915694648183434,0.41254749960294,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0.429680979473094,0.145016693914229,0.426133137080504,0.267096106940212,0.330569830721956,0.192190067365106,0,0.50578890427775,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0.731140468893853,0,0.409499734223957,0.282810863907425,0,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.294747123039363,0,0,0.633322905892992,0.658589785919804,0,0,0.0962221127255121,0,0,0.282431402330337,0.86101074534246,0,0,0,0,0,0,0,0,0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|phase1_expression=0.726713517082227,0,0.845726424575827,2.00146596706261,1.34088328328186,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0.547497700291537,0.125542639594803,0,0.246301768349837,0.157421562627358,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0,0,0.426507697462265,0.880801318004542,0,0.601633342410425,0,0.895661896959697,0.32389366601898,0.77272670290256,1.30858414901608,0.377875943688809,0.970336244751265,0.929716147622738,0.411167888021826,1.85823822537062,1.7261543539329,1.2808035326455,0.47296445977717,1.72372840368309,1.29096936716765,0,1.31769637679823,0.272906150057846,0.898893937780338,0.918251677112708,0.320929027076094,0,0.989553900560148,1.39624560335142,0.852449501065388,0.580418477257168,1.13477044938228,0,1.25624332628372,0.521482918420201,1.3031330682307,0,0.736555271975129,0,1.26753171787165,0.425208599930087,1.04829322754188,0.561643155732475,0.600707571366025,0.803627933485401,0.285012743741249,1.39241674039363,0.365328307529268,1.75996244461323,0,0,0,0.800791974072025,0.574752439954483,1.32208974556972,0,0,0,0.382273228125229,0,2.24203425192614,0.263384084775077,0,1.17903228824749,0.822405995998037,0.668745981562712,0,0,0,0.891283655081389,0,0,0,0.25618263945135,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.434539556882471,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0.649094787309367,1.39303789839414,0.930705723632056,0,0.571994910780128,1.11437250398869,0.39752481473341,0,0,0,0,0.825354125820202,0,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0,1.10298924103761,0,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,1.31780417436063,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.567160915800105,0,0.427114777637135,0,0,0.618315175430633,0,0.558350568994769,0.168776332241266,0.389748020644795,0.252433774244115,0.460249493211497,0.646584227275248,0,0.503760491138201,0,0.193260853163297,0,0,0.121973706129595,0.662648841607426,0.464775771478074,0.621966330092223,1.00928340350251,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0.482022059766964,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0.368965315629341,0.514703430895577,0.439001141634502,0,0,0.277765335475589,0,0,0,0,0.352226082707465,0.577465791044295,0,0.380508304469197,0,0,0.738651018262192,1.40402559083543,0.148631162288728,0.93733833986777,0,0.141775097242386,0.268675568108545,0.290633938513962,0,1.97065295158377,0.528290604079356,1.4512968087854,1.8735593944205,1.2624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0,0,0.266422179016099,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,2.43247561282381,1.00451418286425,0,0.479249710983165,0,0,0.579125226670317,0,0.358121926479791,0.224170287987055,0.394061520403854,0.215627574859517,0.898401253958239,0,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,1.24324654030811,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0.260650843404249,0.195801157462741,0,0.620304078368662,0.215714200818617,0.640365346820666,0.303127571446259,1.66435439510497,0,0.744323423456331,0.460385919864187,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0.325378394664303,0.515205058238611,0.0915694648183434,0.41254749960294,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0.429680979473094,0.145016693914229,0.426133137080504,0.267096106940212,0.330569830721956,0.192190067365106,0,0.50578890427775,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0.731140468893853,0,0.409499734223957,0.282810863907425,0,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.294747123039363,0,0,0.633322905892992,0.658589785919804,0,0,0.0962221127255121,0,0,0.282431402330337,0.86101074534246,0,0,0,0,0,0,0,0,0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| ||
|short_description=p2@TMEM167B | |short_description=p2@TMEM167B | ||
}} | }} |
Latest revision as of 20:45, 15 September 2015
Short description: | p2@TMEM167B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM167B_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000473828_5end |
EntrezGene: | TMEM167B |
HGNC: | 30187 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.68e-19 | 72 |
granulocyte monocyte progenitor cell | 1.06e-17 | 67 |
myeloid cell | 1.90e-17 | 108 |
common myeloid progenitor | 1.90e-17 | 108 |
myeloid lineage restricted progenitor cell | 3.32e-16 | 66 |
defensive cell | 6.63e-14 | 48 |
phagocyte | 6.63e-14 | 48 |
macrophage dendritic cell progenitor | 8.26e-13 | 61 |
leukocyte | 3.62e-12 | 136 |
hematopoietic stem cell | 4.10e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.90e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.90e-12 | 161 |
monopoietic cell | 9.41e-12 | 59 |
monocyte | 9.41e-12 | 59 |
monoblast | 9.41e-12 | 59 |
promonocyte | 9.41e-12 | 59 |
hematopoietic cell | 4.42e-11 | 177 |
classical monocyte | 9.43e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.43e-11 | 42 |
mast cell | 2.18e-10 | 5 |
basophil mast progenitor cell | 2.18e-10 | 5 |
hematopoietic lineage restricted progenitor cell | 2.98e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.22e-15 | 76 |
bone element | 1.99e-13 | 82 |
immune system | 1.82e-12 | 93 |
skeletal element | 9.71e-12 | 90 |
hematopoietic system | 2.04e-11 | 98 |
blood island | 2.04e-11 | 98 |
hemolymphoid system | 5.97e-11 | 108 |
skeletal system | 5.11e-10 | 100 |