FFCP PHASE1:Hg19::chr12:91505237..91505280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4060 | |EntrezGene=4060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6724 | |HGNC=6724 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548071_5end | |association_with_transcript=0bp_to_ENST00000548071_5end | ||
|cluster_id=chr12:91505237..91505280,- | |||
|description=CAGE_peak_1_at_LUM_5end | |description=CAGE_peak_1_at_LUM_5end | ||
|id=chr12:91505237..91505280,- | |id=chr12:91505237..91505280,- | ||
|ontology_enrichment_celltype=CL:0000055!6.21e-24!180;CL:0000057!1.09e-15!75;CL:0002620!5.94e-10!23;CL:0000680!1.41e-08!57;CL:0000056!1.41e-08!57;CL:0000355!1.41e-08!57;CL:0000187!3.82e-08!54;CL:0000183!2.56e-07!59;CL:0000393!6.08e-07!60;CL:0000211!6.08e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.21e-24!180;CL:0000057!1.09e-15!75;CL:0002620!5.94e-10!23;CL:0000680!1.41e-08!57;CL:0000056!1.41e-08!57;CL:0000355!1.41e-08!57;CL:0000187!3.82e-08!54;CL:0000183!2.56e-07!59;CL:0000393!6.08e-07!60;CL:0000211!6.08e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.21e-10;23!CL:0000134;2.32e-09;55!CL:0000723;1.90e-08;61!CL:0000048;3.15e-08;58!CL:0000349;1.61e-07;19!CL:0002320;6.97e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.84e-16,76;CL:0002620,2.20e-10,23;CL:0000680,4.01e-09,58;CL:0000056,4.01e-09,58;CL:0000355,4.01e-09,58;CL:0000187,1.15e-08,55;CL:0000349,1.61e-07,19;CL:0000393,3.62e-07,61;CL:0000211,3.62e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.57e-13!659;UBERON:0000914!4.65e-12!83;UBERON:0002329!4.65e-12!83;UBERON:0003077!4.65e-12!83;UBERON:0003059!4.65e-12!83;UBERON:0007282!4.65e-12!83;UBERON:0009618!4.65e-12!83;UBERON:0007285!4.65e-12!83;UBERON:0000481!2.57e-11!347;UBERON:0004290!2.56e-10!70;UBERON:0000475!4.43e-10!365;UBERON:0002385!1.47e-09!63;UBERON:0001015!1.47e-09!63;UBERON:0000383!1.47e-09!63;UBERON:0002199!4.46e-09!45;UBERON:0002416!4.46e-09!45;UBERON:0001134!5.32e-09!61;UBERON:0002036!5.32e-09!61;UBERON:0003082!5.32e-09!61;UBERON:0005256!6.26e-09!143;UBERON:0003102!1.37e-08!95;UBERON:0004923!1.37e-08!57;UBERON:0000486!1.65e-08!82;UBERON:0003104!2.48e-08!238;UBERON:0009142!2.48e-08!238;UBERON:0000479!5.18e-08!787;UBERON:0000467!6.14e-08!625;UBERON:0002097!6.52e-08!40;UBERON:0000480!9.55e-08!626;UBERON:0000062!1.81e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.10e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.58e-11,73;UBERON:0002329,1.03e-10,71;UBERON:0003059,1.03e-10,71;UBERON:0007282,1.03e-10,71;UBERON:0004290,1.03e-10,71;UBERON:0009618,1.03e-10,71;UBERON:0003077,1.24e-10,72;UBERON:0007285,1.24e-10,72;UBERON:0002385,6.48e-10,64;UBERON:0001015,6.48e-10,64;UBERON:0000383,6.48e-10,64;UBERON:0003104,1.33e-09,160;UBERON:0009142,1.33e-09,160;UBERON:0001134,2.49e-09,62;UBERON:0002036,2.49e-09,62;UBERON:0003082,2.49e-09,62;UBERON:0002199,3.41e-09,46;UBERON:0002416,3.41e-09,46;UBERON:0005256,4.43e-09,122;UBERON:0000479,4.62e-09,773;UBERON:0000486,1.96e-08,83;UBERON:0004923,2.92e-08,66;UBERON:0007503,4.12e-08,78;UBERON:0002097,5.59e-08,41;UBERON:0003102,9.54e-08,99;UBERON:0007100,7.56e-07,27 | |||
|phase1_expression=404.052715497718,237.4374809951,597.646673366918,274.200837487577,840.286857523301,255.595187561408,369.817822125733,97.284860507732,26.9021197045834,4.17747692052565,0,69.0274735931344,51.9620947110053,218.076313915602,86.8261124407139,29.5823064438781,13.2592796165275,14.6062018077475,15.1259167625057,19.3300061180557,0.816002764977012,3.44800193625897,8.30084362680065,1.09499540058307,3.64073654824928,0,0,0,0,0,51.5537690642533,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1349875658342,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,621.707509100602,143.529983976578,62.0133424941122,1222.02577421222,873.33064032772,1248.72183996126,1496.72815235017,1925.12754691723,36.4904394253302,58.5365609301169,36.8906099911129,88.9347922629469,0,0,0,0,0.398873881556595,0,0,0,0,4.30117297553062,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0.488124115096339,1.47065232138347,0,0.803697554556718,0.44905874525234,0.337834441449967,0,0.949265659568129,1.83201743930407,0,0,0,1091.84737787461,21.400556471314,344.131460933556,379.771685871429,47.5255632145798,172.688700843831,5.33744978648525,55.7468659422781,281.023564965989,68.7024427555409,117.529108338577,60.8456859132624,93.3404997657598,4.92075006850973,11.5499228427219,13.6913237170668,82.0473256229388,46.2691924656434,45.3244244230768,54.6353638071747,57.5714762938799,7.12439040408254,47.8398366843794,392.040942903078,82.587154379038,37.3166158394591,8.62341770179486,116.656926970168,39.0369782000528,31.5853091651969,190.955265083165,124.740532890201,67.9076026257817,55.6952019315703,1284.25040189656,1936.11128702913,554.625785334573,410.824710539547,529.071685110145,1113.00713299712,1140.89632931265,121.856511878194,113.124362992152,915.829732957647,1286.94963291799,493.990349638289,2472.64181187822,977.295352808111,204.150953141827,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.662648841607426,66.8115171499731,10.0551223364909,4.28945446488568,0.72995471815166,417.720251320609,347.993347562351,12.4321429217232,246.115001856949,251.935939102685,402.00650653539,343.069844308937,268.486287290199,397.720065673013,367.126863295704,255.30318616354,360.134424095799,432.668330601388,329.728313503057,0,2.80483547606892,26.752310736541,30.8718293909638,0,1.96565443335525,49.0355622545565,0,15.4965432564323,60.9065726559766,0.219500570817251,0,0.100528972411631,0,0.651616610620649,0,38.9694623468238,109.206441486522,642.225557469945,0,0,0,0,0,0.738651018262192,0,0,6.56136837907439,10.0789276919316,1.41775097242386,0,0,1.15014803749563,12.8092441852945,11.0060542516533,6.84182781284548,2.30591925467138,3.02981840223312,6.79427468926209,0,0,22.2394179829517,19.3315686282248,0,0.285826432630578,32.0694901227732,32.697005162496,60.4307475164628,413.410946993373,28.6125156681506,60.861798184032,368.856167703215,164.331750319958,12.0887465903207,0,3.19706614819319,774.654769639843,507.351201040999,64.2127462689,81.7597822577275,644.325603070236,236.001658134162,92.8433281343525,210.911096981271,33.5909250371712,0,0,0,52.4778433526566,64.3226840671038,38.511964360994,125.091048960788,11.0957214177207,108.331882760137,0,0,0,0,4.8277978602268,1.30139853857622,2.31986643833309,4.52293916402742,3.82763250991898,0,0,0.828831026872071,239.61648332748,56.5192688797435,16.8184314693836,169.496252147608,321.88589579008,130.419897233064,169.386486079463,185.98468963173,450.26685803085,87.9521105986292,120.224833334914,13.0902109664609,820.007553349766,7.63624514104688,10.9805895619474,0.206768026122887,0,0,40.922222145245,302.912499909105,89.2051365322557,951.24533517719,1156.79635464541,651.131419084731,500.255238694257,915.955975829399,469.050034054759,53.4305039201968,94.0679132196199,197.981323724137,159.901572758886,139.16018702121,150.260019348727,2.77976734060731,0.601519410909855,0.0920809889358963,680.39041982346,193.56291159114,231.303467988424,0,1.07821471946181,0,1.46139224653261,1.37217117560738,0,0,0.215915916102139,0,1.89662506280697,0.501689773854853,0.509752546090077,0,0.223874754722178,3.28889814968902,2.87578996127391,1.53870075069834,17.3847762220844,6.50756789328606,762.915650239736,320.767835258657,596.791212925613,2.29706215198469,9.75090369054782,316.547341792994,21.4608994608511,31.8880637427314,42.3670142244118,48.6563100870393,196.579048108941,34.6589898455006,25.3975349699981,146.012538460649,0,0.768760269460425,0,0.10115778085555,28.3555785071344,838.345279609995,16.0318572136938,43.7407683850046,1.06461206063404,24.358123778102,2.96518750566272,6.44061990338961,251.951216056495,164.200921429019,250.869335203753,10.4918094437647,82.1642857025127,7.95508119814842,2.35484592059769,999.371374332897,936.445808429683,528.859874129786,3.43710218674637,12.6808256938407,12.2164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|phase1_expression=404.052715497718,237.4374809951,597.646673366918,274.200837487577,840.286857523301,255.595187561408,369.817822125733,97.284860507732,26.9021197045834,4.17747692052565,0,69.0274735931344,51.9620947110053,218.076313915602,86.8261124407139,29.5823064438781,13.2592796165275,14.6062018077475,15.1259167625057,19.3300061180557,0.816002764977012,3.44800193625897,8.30084362680065,1.09499540058307,3.64073654824928,0,0,0,0,0,51.5537690642533,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1349875658342,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,621.707509100602,143.529983976578,62.0133424941122,1222.02577421222,873.33064032772,1248.72183996126,1496.72815235017,1925.12754691723,36.4904394253302,58.5365609301169,36.8906099911129,88.9347922629469,0,0,0,0,0.398873881556595,0,0,0,0,4.30117297553062,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.805658634218294,0,0.488124115096339,1.47065232138347,0,0.803697554556718,0.44905874525234,0.337834441449967,0,0.949265659568129,1.83201743930407,0,0,0,1091.84737787461,21.400556471314,344.131460933556,379.771685871429,47.5255632145798,172.688700843831,5.33744978648525,55.7468659422781,281.023564965989,68.7024427555409,117.529108338577,60.8456859132624,93.3404997657598,4.92075006850973,11.5499228427219,13.6913237170668,82.0473256229388,46.2691924656434,45.3244244230768,54.6353638071747,57.5714762938799,7.12439040408254,47.8398366843794,392.040942903078,82.587154379038,37.3166158394591,8.62341770179486,116.656926970168,39.0369782000528,31.5853091651969,190.955265083165,124.740532890201,67.9076026257817,55.6952019315703,1284.25040189656,1936.11128702913,554.625785334573,410.824710539547,529.071685110145,1113.00713299712,1140.89632931265,121.856511878194,113.124362992152,915.829732957647,1286.94963291799,493.990349638289,2472.64181187822,977.295352808111,204.150953141827,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.662648841607426,66.8115171499731,10.0551223364909,4.28945446488568,0.72995471815166,417.720251320609,347.993347562351,12.4321429217232,246.115001856949,251.935939102685,402.00650653539,343.069844308937,268.486287290199,397.720065673013,367.126863295704,255.30318616354,360.134424095799,432.668330601388,329.728313503057,0,2.80483547606892,26.752310736541,30.8718293909638,0,1.96565443335525,49.0355622545565,0,15.4965432564323,60.9065726559766,0.219500570817251,0,0.100528972411631,0,0.651616610620649,0,38.9694623468238,109.206441486522,642.225557469945,0,0,0,0,0,0.738651018262192,0,0,6.56136837907439,10.0789276919316,1.41775097242386,0,0,1.15014803749563,12.8092441852945,11.0060542516533,6.84182781284548,2.30591925467138,3.02981840223312,6.79427468926209,0,0,22.2394179829517,19.3315686282248,0,0.285826432630578,32.0694901227732,32.697005162496,60.4307475164628,413.410946993373,28.6125156681506,60.861798184032,368.856167703215,164.331750319958,12.0887465903207,0,3.19706614819319,774.654769639843,507.351201040999,64.2127462689,81.7597822577275,644.325603070236,236.001658134162,92.8433281343525,210.911096981271,33.5909250371712,0,0,0,52.4778433526566,64.3226840671038,38.511964360994,125.091048960788,11.0957214177207,108.331882760137,0,0,0,0,4.8277978602268,1.30139853857622,2.31986643833309,4.52293916402742,3.82763250991898,0,0,0.828831026872071,239.61648332748,56.5192688797435,16.8184314693836,169.496252147608,321.88589579008,130.419897233064,169.386486079463,185.98468963173,450.26685803085,87.9521105986292,120.224833334914,13.0902109664609,820.007553349766,7.63624514104688,10.9805895619474,0.206768026122887,0,0,40.922222145245,302.912499909105,89.2051365322557,951.24533517719,1156.79635464541,651.131419084731,500.255238694257,915.955975829399,469.050034054759,53.4305039201968,94.0679132196199,197.981323724137,159.901572758886,139.16018702121,150.260019348727,2.77976734060731,0.601519410909855,0.0920809889358963,680.39041982346,193.56291159114,231.303467988424,0,1.07821471946181,0,1.46139224653261,1.37217117560738,0,0,0.215915916102139,0,1.89662506280697,0.501689773854853,0.509752546090077,0,0.223874754722178,3.28889814968902,2.87578996127391,1.53870075069834,17.3847762220844,6.50756789328606,762.915650239736,320.767835258657,596.791212925613,2.29706215198469,9.75090369054782,316.547341792994,21.4608994608511,31.8880637427314,42.3670142244118,48.6563100870393,196.579048108941,34.6589898455006,25.3975349699981,146.012538460649,0,0.768760269460425,0,0.10115778085555,28.3555785071344,838.345279609995,16.0318572136938,43.7407683850046,1.06461206063404,24.358123778102,2.96518750566272,6.44061990338961,251.951216056495,164.200921429019,250.869335203753,10.4918094437647,82.1642857025127,7.95508119814842,2.35484592059769,999.371374332897,936.445808429683,528.859874129786,3.43710218674637,12.6808256938407,12.2164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| ||
|short_description=p1@LUM | |short_description=p1@LUM | ||
}} | }} |
Latest revision as of 21:07, 15 September 2015
Short description: | p1@LUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LUM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000548071_5end |
EntrezGene: | LUM |
HGNC: | 6724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.84e-16 | 76 |
skin fibroblast | 2.20e-10 | 23 |
muscle precursor cell | 4.01e-09 | 58 |
myoblast | 4.01e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.01e-09 | 58 |
muscle cell | 1.15e-08 | 55 |
extraembryonic cell | 1.61e-07 | 19 |
electrically responsive cell | 3.62e-07 | 61 |
electrically active cell | 3.62e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.58e-11 | 73 |
somite | 1.03e-10 | 71 |
presomitic mesoderm | 1.03e-10 | 71 |
presumptive segmental plate | 1.03e-10 | 71 |
dermomyotome | 1.03e-10 | 71 |
trunk paraxial mesoderm | 1.03e-10 | 71 |
paraxial mesoderm | 1.24e-10 | 72 |
presumptive paraxial mesoderm | 1.24e-10 | 72 |
muscle tissue | 6.48e-10 | 64 |
musculature | 6.48e-10 | 64 |
musculature of body | 6.48e-10 | 64 |
mesenchyme | 1.33e-09 | 160 |
entire embryonic mesenchyme | 1.33e-09 | 160 |
skeletal muscle tissue | 2.49e-09 | 62 |
striated muscle tissue | 2.49e-09 | 62 |
myotome | 2.49e-09 | 62 |
integument | 3.41e-09 | 46 |
integumental system | 3.41e-09 | 46 |
trunk mesenchyme | 4.43e-09 | 122 |
tissue | 4.62e-09 | 773 |
multilaminar epithelium | 1.96e-08 | 83 |
organ component layer | 2.92e-08 | 66 |
epithelial vesicle | 4.12e-08 | 78 |
skin of body | 5.59e-08 | 41 |
surface structure | 9.54e-08 | 99 |
primary circulatory organ | 7.56e-07 | 27 |