FFCP PHASE1:Hg19::chr5:147211220..147211225,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6690 | |EntrezGene=6690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11244 | |HGNC=11244 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIU5 | |UniProt=D6RIU5 | ||
|association_with_transcript=-22bp_to_ENST00000510027_5end | |association_with_transcript=-22bp_to_ENST00000510027_5end | ||
|cluster_id=chr5:147211220..147211225,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_4_at_SPINK1_5end | |description=CAGE_peak_4_at_SPINK1_5end | ||
|id=chr5:147211220..147211225,- | |id=chr5:147211220..147211225,- | ||
|ontology_enrichment_celltype=CL:0000181!2.00e-10!12;CL:0000417!2.00e-10!12;CL:0000668!2.00e-10!12;CL:0000414!2.00e-10!12;CL:0000412!2.00e-10!12;CL:0000182!2.00e-10!12;CL:0000223!4.57e-08!59;CL:0002178!2.67e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.00e-10!12;CL:0000417!2.00e-10!12;CL:0000668!2.00e-10!12;CL:0000414!2.00e-10!12;CL:0000412!2.00e-10!12;CL:0000182!2.00e-10!12;CL:0000223!4.57e-08!59;CL:0002178!2.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.10e-12;12!CL:0002563;1.10e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.88e-12,12;CL:0002563,1.07e-09,4;CL:0000223,1.38e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.89e-10;1!UBERON:0004161;1.48e-07;11!UBERON:0006595;4.86e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.64e-28!35;UBERON:0000160!9.19e-24!27;UBERON:0004921!4.77e-22!129;UBERON:0004185!4.77e-22!129;UBERON:0000059!1.60e-21!11;UBERON:0001007!5.73e-19!155;UBERON:0001555!5.73e-19!155;UBERON:0007026!5.73e-19!155;UBERON:0004119!6.78e-17!169;UBERON:0000925!6.78e-17!169;UBERON:0006595!6.78e-17!169;UBERON:0004907!5.24e-16!5;UBERON:0001155!5.73e-14!9;UBERON:0000077!5.47e-12!130;UBERON:0001046!7.22e-12!19;UBERON:0001052!8.25e-12!4;UBERON:0003929!6.43e-11!54;UBERON:0009854!7.43e-10!23;UBERON:0002107!4.25e-09!19;UBERON:0006925!4.25e-09!19;UBERON:0008836!4.25e-09!19;UBERON:0009497!4.66e-09!25;UBERON:0000015!4.66e-09!25;UBERON:0002423!4.66e-09!25;UBERON:0006235!4.66e-09!25;UBERON:0004161!4.66e-09!25;UBERON:0009856!1.31e-08!26;UBERON:0005057!1.45e-08!26;UBERON:0008835!9.04e-08!22;UBERON:0003894!9.04e-08!22;UBERON:0000481!3.78e-07!347;UBERON:0007499!9.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.42e-36;22!UBERON:0000160;4.28e-30;17!UBERON:0004921;1.58e-21;33!UBERON:0002108;1.49e-16;4!UBERON:0001155;9.00e-16;9!UBERON:0000059;6.04e-13;11!UBERON:0002423;3.60e-12;25!UBERON:0002107;1.77e-11;19!UBERON:0006925;1.77e-11;19!UBERON:0001007;2.27e-10;81!UBERON:0001242;1.10e-09;4!UBERON:0001262;1.10e-09;4!UBERON:0004786;1.10e-09;4!UBERON:0004808;1.10e-09;4!UBERON:0001277;1.10e-09;4!UBERON:0001555;2.87e-08;54!UBERON:0000945;7.51e-08;5!UBERON:0010039;7.51e-08;5!UBERON:0002365;3.33e-07;31!UBERON:0002330;3.33e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.07e-32,25;UBERON:0000160,4.04e-30,17;UBERON:0004921,1.10e-20,118;UBERON:0001007,2.20e-18,145;UBERON:0001555,2.20e-18,145;UBERON:0007026,2.20e-18,145;UBERON:0002108,1.45e-16,4;UBERON:0004119,2.22e-16,160;UBERON:0000925,2.22e-16,160;UBERON:0006595,2.22e-16,160;UBERON:0001155,8.83e-16,9;UBERON:0003929,1.64e-14,54;UBERON:0000059,5.95e-13,11;UBERON:0009497,3.49e-12,25;UBERON:0000015,3.49e-12,25;UBERON:0002423,3.49e-12,25;UBERON:0006235,3.49e-12,25;UBERON:0004161,3.49e-12,25;UBERON:0002107,1.73e-11,19;UBERON:0006925,1.73e-11,19;UBERON:0008836,1.73e-11,19;UBERON:0011216,9.70e-11,223;UBERON:0008835,6.69e-10,22;UBERON:0003894,6.69e-10,22;UBERON:0001242,1.07e-09,4;UBERON:0001262,1.07e-09,4;UBERON:0004786,1.07e-09,4;UBERON:0004808,1.07e-09,4;UBERON:0001277,1.07e-09,4;UBERON:0009854,1.83e-09,23;UBERON:0005911,4.90e-09,82;UBERON:0007499,1.08e-08,25;UBERON:0009856,2.38e-08,26;UBERON:0001046,2.31e-07,19;UBERON:0005172,3.80e-07,54;UBERON:0005173,3.80e-07,54;UBERON:0002365,5.69e-07,31;UBERON:0002330,5.69e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,32.956309053676,31.450470933684,21.2684366405305,0,5.28850285735388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,3.27512572210559,0,0,0,0,0,0,2.36744173528641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,6.9263005002631,0,8.95735737970654,3.71521770914025,7.33236173920351,0,0,0,0,0,0,0,0,0,0,54.4458222218988,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56143593687223,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,2.65754200089822,0,0,0,0,0,0,0,0,0,0,1.02447419488958,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,181.311250606077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0989032999072,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,4.09023037972107,15.517728795781,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,25.5617735886281,0,0,0,0,0,54.4897645730862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,32.956309053676,31.450470933684,21.2684366405305,0,5.28850285735388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,3.27512572210559,0,0,0,0,0,0,2.36744173528641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,6.9263005002631,0,8.95735737970654,3.71521770914025,7.33236173920351,0,0,0,0,0,0,0,0,0,0,54.4458222218988,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56143593687223,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,2.65754200089822,0,0,0,0,0,0,0,0,0,0,1.02447419488958,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,181.311250606077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0989032999072,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,4.09023037972107,15.517728795781,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,25.5617735886281,0,0,0,0,0,54.4897645730862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@SPINK1 | |short_description=p4@SPINK1 | ||
}} | }} |
Latest revision as of 23:00, 15 September 2015
Short description: | p4@SPINK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPINK1_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | -22bp_to_ENST00000510027_5end |
EntrezGene: | SPINK1 |
HGNC: | 11244 |
UniProt: | D6RIU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.88e-12 | 12 |
intestinal epithelial cell | 1.07e-09 | 4 |
endodermal cell | 1.38e-08 | 58 |