FFCP PHASE1:Hg19::chr1:224622452..224622524,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:224622452..224622524,-
|short_description=p1@WDR26
|description=CAGE_peak_1_at_WDR26_5end
|association_with_transcript=-451bp_to_ENST00000295024,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80232 | |EntrezGene=80232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21208 | |HGNC=21208 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7D7 | |UniProt=Q9H7D7 | ||
|association_with_transcript=-451bp_to_ENST00000295024,ENST00000414423,NM_001115113,NM_025160_5end | |||
|cluster_id=chr1:224622452..224622524,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_WDR26_5end | |||
|id=chr1:224622452..224622524,- | |||
|ontology_enrichment_celltype=CL:0000766!6.41e-21!76;CL:0000557!9.82e-18!71;CL:0000839!1.06e-17!70;CL:0002009!7.98e-16!65;CL:0002194!4.61e-15!63;CL:0000576!4.61e-15!63;CL:0000040!4.61e-15!63;CL:0000559!4.61e-15!63;CL:0002057!5.01e-15!42;CL:0000738!1.35e-13!140;CL:0000763!8.25e-13!112;CL:0000049!8.25e-13!112;CL:0000860!1.02e-12!45;CL:0002031!9.06e-12!124;CL:0002087!4.95e-10!119;CL:0000037!1.20e-09!172;CL:0000566!1.20e-09!172;CL:0002032!2.18e-09!165;CL:0000837!2.18e-09!165;CL:0000988!6.79e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.88e-14;33!CL:0002057;2.88e-14;33!CL:0000473;1.25e-13;39!CL:0000234;1.25e-13;39!CL:0000576;2.15e-10;48!CL:0000766;2.77e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.57e-23,72;CL:0000557,1.61e-19,67;CL:0000839,1.68e-19,66;CL:0002009,1.42e-17,61;CL:0000473,5.31e-17,48;CL:0000234,5.31e-17,48;CL:0002194,8.72e-17,59;CL:0000576,8.72e-17,59;CL:0000040,8.72e-17,59;CL:0000559,8.72e-17,59;CL:0000860,5.01e-15,42;CL:0002057,5.01e-15,42;CL:0000738,1.85e-14,136;CL:0000763,8.83e-14,108;CL:0000049,8.83e-14,108;CL:0002031,1.29e-12,120;CL:0002087,8.36e-11,115;CL:0000037,3.13e-10,168;CL:0002032,5.61e-10,161;CL:0000837,5.61e-10,161;CL:0000988,1.23e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.33e-21!102;UBERON:0003061!9.33e-21!102;UBERON:0002193!2.44e-20!112;UBERON:0002371!4.75e-14!80;UBERON:0001474!1.81e-13!86;UBERON:0002405!4.17e-12!115;UBERON:0004765!2.23e-11!101;UBERON:0001434!2.23e-11!101;UBERON:0007023!6.84e-11!115;UBERON:0000178!2.08e-08!15;UBERON:0000179!2.08e-08!15;UBERON:0000463!2.08e-08!15;UBERON:0003081!4.27e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.11e-08;15!UBERON:0000179;2.11e-08;15!UBERON:0000463;2.11e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.88e-22,98;UBERON:0003061,2.88e-22,98;UBERON:0002193,1.01e-21,108;UBERON:0002371,2.14e-15,76;UBERON:0002405,2.26e-15,93;UBERON:0001474,1.06e-14,82;UBERON:0004765,3.81e-12,90;UBERON:0001434,6.64e-12,100;UBERON:0003081,6.25e-11,203;UBERON:0007023,1.07e-10,114;UBERON:0000178,2.08e-08,15;UBERON:0000179,2.08e-08,15;UBERON:0000463,2.08e-08,15 | |||
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| ||
|short_description=p1@WDR26 | |||
}} | }} |
Latest revision as of 23:26, 15 September 2015
Short description: | p1@WDR26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR26_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -451bp_to_ENST00000295024, ENST00000414423, NM_001115113, NM_025160_5end |
EntrezGene: | WDR26 |
HGNC: | 21208 |
UniProt: | Q9H7D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.57e-23 | 72 |
granulocyte monocyte progenitor cell | 1.61e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.68e-19 | 66 |
macrophage dendritic cell progenitor | 1.42e-17 | 61 |
defensive cell | 5.31e-17 | 48 |
phagocyte | 5.31e-17 | 48 |
monopoietic cell | 8.72e-17 | 59 |
monocyte | 8.72e-17 | 59 |
monoblast | 8.72e-17 | 59 |
promonocyte | 8.72e-17 | 59 |
classical monocyte | 5.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.01e-15 | 42 |
leukocyte | 1.85e-14 | 136 |
myeloid cell | 8.83e-14 | 108 |
common myeloid progenitor | 8.83e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 1.29e-12 | 120 |
nongranular leukocyte | 8.36e-11 | 115 |
hematopoietic stem cell | 3.13e-10 | 168 |
hematopoietic oligopotent progenitor cell | 5.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.61e-10 | 161 |
hematopoietic cell | 1.23e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.88e-22 | 98 |
blood island | 2.88e-22 | 98 |
hemolymphoid system | 1.01e-21 | 108 |
bone marrow | 2.14e-15 | 76 |
immune system | 2.26e-15 | 93 |
bone element | 1.06e-14 | 82 |
skeletal element | 3.81e-12 | 90 |
skeletal system | 6.64e-12 | 100 |
lateral plate mesoderm | 6.25e-11 | 203 |
adult organism | 1.07e-10 | 114 |
blood | 2.08e-08 | 15 |
haemolymphatic fluid | 2.08e-08 | 15 |
organism substance | 2.08e-08 | 15 |