FFCP PHASE1:Hg19::chr12:93964158..93964170,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:93964158..93964170,+
|short_description=p9@SOCS2
|description=CAGE_peak_9_at_SOCS2_5end
|association_with_transcript=-4bp_to_ENST00000549206,uc001tcx.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8835 | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19382 | |HGNC=19382 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000549206,uc001tcx.1_5end | |||
|cluster_id=chr12:93964158..93964170,+ | |||
|description=CAGE_peak_9_at_SOCS2_5end | |||
|id=chr12:93964158..93964170,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.34e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002552;2.62e-11;5!CL:0002556;2.15e-09;6!CL:0000057;7.83e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.46e-14,76;CL:0002552,1.49e-11,5;CL:0002556,2.01e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.20e-08;4!DOID:1612;4.20e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.26e-08,4;DOID:1612,2.26e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;2.15e-09;6!UBERON:0003672;2.15e-09;6!UBERON:0000310;3.59e-08;10!UBERON:0003129;4.75e-08;7!UBERON:0000007;1.04e-07;2!UBERON:0011137;1.20e-07;11!UBERON:0010323;1.20e-07;11!UBERON:0001443;2.14e-07;11!UBERON:0001828;4.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.56e-10,99;UBERON:0001758,2.01e-09,6;UBERON:0003672,2.01e-09,6;UBERON:0000310,3.12e-08,10;UBERON:0003129,4.48e-08,7;UBERON:0000165,4.58e-08,29;UBERON:0000930,4.58e-08,29;UBERON:0010323,1.20e-07,11;UBERON:0000007,1.41e-07,2;UBERON:0001443,1.89e-07,11;UBERON:0001828,3.30e-07,8 | |||
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| ||
|short_description=p9@SOCS2 | |||
}} | }} |
Latest revision as of 00:08, 16 September 2015
Short description: | p9@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SOCS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000549206, uc001tcx.1_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.46e-14 | 76 |
fibroblast of gingiva | 1.49e-11 | 5 |
fibroblast of periodontium | 2.01e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.56e-10 | 99 |
periodontium | 2.01e-09 | 6 |
dentition | 2.01e-09 | 6 |
breast | 3.12e-08 | 10 |
skull | 4.48e-08 | 7 |
mouth | 4.58e-08 | 29 |
stomodeum | 4.58e-08 | 29 |
cranial skeletal system | 1.20e-07 | 11 |
pituitary gland | 1.41e-07 | 2 |
chest | 1.89e-07 | 11 |
gingiva | 3.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.26e-08 | 4 |
breast cancer | 2.26e-08 | 4 |