FFCP PHASE1:Hg19::chr16:28550320..28550345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26471 | |EntrezGene=26471 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29990 | |HGNC=29990 | ||
|TSSclassifier=strong | |||
|UniProt=O60356 | |UniProt=O60356 | ||
|association_with_transcript=108bp_to_ENST00000324873_5end | |association_with_transcript=108bp_to_ENST00000324873_5end | ||
|cluster_id=chr16:28550320..28550345,- | |||
|description=CAGE_peak_2_at_NUPR1_5end | |description=CAGE_peak_2_at_NUPR1_5end | ||
|id=chr16:28550320..28550345,- | |id=chr16:28550320..28550345,- | ||
|ontology_enrichment_celltype=CL:0000055!3.84e-19!180;CL:0000057!1.73e-14!75;CL:0000220!3.60e-09!246;CL:0002321!7.84e-09!248;CL:0000680!4.07e-08!57;CL:0000056!4.07e-08!57;CL:0000355!4.07e-08!57;CL:0000187!1.76e-07!54;CL:0000499!8.05e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.84e-19!180;CL:0000057!1.73e-14!75;CL:0000220!3.60e-09!246;CL:0002321!7.84e-09!248;CL:0000680!4.07e-08!57;CL:0000056!4.07e-08!57;CL:0000355!4.07e-08!57;CL:0000187!1.76e-07!54;CL:0000499!8.05e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000499;7.95e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.55e-15,76;CL:0000680,1.10e-08,58;CL:0000056,1.10e-08,58;CL:0000355,1.10e-08,58;CL:0000187,5.04e-08,55;CL:0002321,1.67e-07,250;CL:0000192,3.25e-07,43;CL:0000514,3.25e-07,43;CL:0000499,7.79e-07,28;CL:0000136,8.59e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.79e-18!365;UBERON:0000468!3.44e-13!659;UBERON:0000481!6.89e-13!347;UBERON:0002100!3.94e-11!216;UBERON:0000467!7.07e-11!625;UBERON:0000480!1.28e-10!626;UBERON:0003102!5.89e-10!95;UBERON:0000062!2.95e-09!511;UBERON:0000914!3.94e-09!83;UBERON:0002329!3.94e-09!83;UBERON:0003077!3.94e-09!83;UBERON:0003059!3.94e-09!83;UBERON:0007282!3.94e-09!83;UBERON:0009618!3.94e-09!83;UBERON:0007285!3.94e-09!83;UBERON:0003104!8.49e-09!238;UBERON:0009142!8.49e-09!238;UBERON:0000119!2.20e-08!312;UBERON:0000483!3.20e-08!309;UBERON:0005256!5.77e-08!143;UBERON:0002530!5.81e-08!59;UBERON:0004290!6.81e-08!70;UBERON:0001048!7.21e-08!168;UBERON:0001134!1.03e-07!61;UBERON:0002036!1.03e-07!61;UBERON:0003082!1.03e-07!61;UBERON:0000486!1.54e-07!82;UBERON:0002385!1.77e-07!63;UBERON:0001015!1.77e-07!63;UBERON:0000383!1.77e-07!63;UBERON:0000477!2.67e-07!286;UBERON:0002365!4.50e-07!31;UBERON:0002330!4.50e-07!31;UBERON:0002050!7.52e-07!605;UBERON:0005423!7.52e-07!605;UBERON:0000923!8.72e-07!604;UBERON:0005291!8.72e-07!604;UBERON:0006598!8.72e-07!604;UBERON:0002532!8.72e-07!604 | |ontology_enrichment_uberon=UBERON:0000475!1.79e-18!365;UBERON:0000468!3.44e-13!659;UBERON:0000481!6.89e-13!347;UBERON:0002100!3.94e-11!216;UBERON:0000467!7.07e-11!625;UBERON:0000480!1.28e-10!626;UBERON:0003102!5.89e-10!95;UBERON:0000062!2.95e-09!511;UBERON:0000914!3.94e-09!83;UBERON:0002329!3.94e-09!83;UBERON:0003077!3.94e-09!83;UBERON:0003059!3.94e-09!83;UBERON:0007282!3.94e-09!83;UBERON:0009618!3.94e-09!83;UBERON:0007285!3.94e-09!83;UBERON:0003104!8.49e-09!238;UBERON:0009142!8.49e-09!238;UBERON:0000119!2.20e-08!312;UBERON:0000483!3.20e-08!309;UBERON:0005256!5.77e-08!143;UBERON:0002530!5.81e-08!59;UBERON:0004290!6.81e-08!70;UBERON:0001048!7.21e-08!168;UBERON:0001134!1.03e-07!61;UBERON:0002036!1.03e-07!61;UBERON:0003082!1.03e-07!61;UBERON:0000486!1.54e-07!82;UBERON:0002385!1.77e-07!63;UBERON:0001015!1.77e-07!63;UBERON:0000383!1.77e-07!63;UBERON:0000477!2.67e-07!286;UBERON:0002365!4.50e-07!31;UBERON:0002330!4.50e-07!31;UBERON:0002050!7.52e-07!605;UBERON:0005423!7.52e-07!605;UBERON:0000923!8.72e-07!604;UBERON:0005291!8.72e-07!604;UBERON:0006598!8.72e-07!604;UBERON:0002532!8.72e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;4.35e-07;31!UBERON:0002330;4.35e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.88e-10,99;UBERON:0005256,4.08e-09,122;UBERON:0002100,9.34e-09,199;UBERON:0007524,1.65e-08,73;UBERON:0003104,1.87e-08,160;UBERON:0009142,1.87e-08,160;UBERON:0003077,2.52e-08,72;UBERON:0007285,2.52e-08,72;UBERON:0002530,2.71e-08,59;UBERON:0001134,2.97e-08,62;UBERON:0002036,2.97e-08,62;UBERON:0003082,2.97e-08,62;UBERON:0002329,3.01e-08,71;UBERON:0003059,3.01e-08,71;UBERON:0007282,3.01e-08,71;UBERON:0004290,3.01e-08,71;UBERON:0009618,3.01e-08,71;UBERON:0002385,5.28e-08,64;UBERON:0001015,5.28e-08,64;UBERON:0000383,5.28e-08,64;UBERON:0000486,9.75e-08,83;UBERON:0001048,1.13e-07,160;UBERON:0000119,3.05e-07,309;UBERON:0002365,3.28e-07,31;UBERON:0002330,3.28e-07,31;UBERON:0000483,4.34e-07,306 | |||
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| ||
|short_description=p2@NUPR1 | |short_description=p2@NUPR1 | ||
}} | }} |
Latest revision as of 00:12, 16 September 2015
Short description: | p2@NUPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NUPR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000324873_5end |
EntrezGene: | NUPR1 |
HGNC: | 29990 |
UniProt: | O60356 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.55e-15 | 76 |
muscle precursor cell | 1.10e-08 | 58 |
myoblast | 1.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-08 | 58 |
muscle cell | 5.04e-08 | 55 |
embryonic cell | 1.67e-07 | 250 |
smooth muscle cell | 3.25e-07 | 43 |
smooth muscle myoblast | 3.25e-07 | 43 |
stromal cell | 7.79e-07 | 28 |
fat cell | 8.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.88e-10 | 99 |
trunk mesenchyme | 4.08e-09 | 122 |
trunk | 9.34e-09 | 199 |
dense mesenchyme tissue | 1.65e-08 | 73 |
mesenchyme | 1.87e-08 | 160 |
entire embryonic mesenchyme | 1.87e-08 | 160 |
paraxial mesoderm | 2.52e-08 | 72 |
presumptive paraxial mesoderm | 2.52e-08 | 72 |
gland | 2.71e-08 | 59 |
skeletal muscle tissue | 2.97e-08 | 62 |
striated muscle tissue | 2.97e-08 | 62 |
myotome | 2.97e-08 | 62 |
somite | 3.01e-08 | 71 |
presomitic mesoderm | 3.01e-08 | 71 |
presumptive segmental plate | 3.01e-08 | 71 |
dermomyotome | 3.01e-08 | 71 |
trunk paraxial mesoderm | 3.01e-08 | 71 |
muscle tissue | 5.28e-08 | 64 |
musculature | 5.28e-08 | 64 |
musculature of body | 5.28e-08 | 64 |
multilaminar epithelium | 9.75e-08 | 83 |
primordium | 1.13e-07 | 160 |
cell layer | 3.05e-07 | 309 |
exocrine gland | 3.28e-07 | 31 |
exocrine system | 3.28e-07 | 31 |
epithelium | 4.34e-07 | 306 |