FFCP PHASE1:Hg19::chr5:148206556..148206573,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:148206556..148206573,+
|short_description=p2@ADRB2
|description=CAGE_peak_2_at_ADRB2_5end
|association_with_transcript=161bp_to_AY136741_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154 | |EntrezGene=154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=286 | |HGNC=286 | ||
|TSSclassifier=strong | |||
|UniProt=P07550 | |UniProt=P07550 | ||
|association_with_transcript=161bp_to_AY136741_5end | |||
|cluster_id=chr5:148206556..148206573,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_ADRB2_5end | |||
|id=chr5:148206556..148206573,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.98e-13!42;CL:0000766!5.81e-12!76;CL:0000860!7.15e-12!45;CL:0000839!1.97e-11!70;CL:0000557!3.59e-11!71;CL:0002274!6.68e-11!5;CL:0000457!6.68e-11!5;CL:0002191!6.68e-11!5;CL:0000097!6.68e-11!5;CL:0000831!6.68e-11!5;CL:0002028!6.68e-11!5;CL:0000738!7.64e-08!140;CL:0002194!1.18e-07!63;CL:0000576!1.18e-07!63;CL:0000040!1.18e-07!63;CL:0000559!1.18e-07!63;CL:0000623!2.35e-07!3;CL:0000825!2.35e-07!3;CL:0002009!2.89e-07!65;CL:0002031!3.54e-07!124;CL:0002076!1.00e-06!43 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.50e-34;5!CL:0000163;5.30e-19;9!CL:0000623;1.95e-15;3!CL:0000766;3.45e-11;69!CL:0002393;6.83e-08;6!CL:0002397;6.83e-08;6!CL:0000860;9.34e-07;33!CL:0002057;9.34e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.93e-34,5;CL:0002028,3.93e-34,5;CL:0000163,4.02e-19,9;CL:0000839,2.00e-17,66;CL:0000557,3.80e-17,67;CL:0000766,7.25e-16,72;CL:0000623,1.95e-15,3;CL:0000825,1.95e-15,3;CL:0002031,5.30e-15,120;CL:0000738,5.25e-13,136;CL:0000860,1.37e-11,42;CL:0002057,1.37e-11,42;CL:0002032,1.13e-10,161;CL:0000837,1.13e-10,161;CL:0000037,3.85e-10,168;CL:0000763,4.21e-10,108;CL:0000049,4.21e-10,108;CL:0000473,4.66e-10,48;CL:0000234,4.66e-10,48;CL:0000988,1.61e-09,177;CL:0002194,6.57e-08,59;CL:0000576,6.57e-08,59;CL:0000040,6.57e-08,59;CL:0000559,6.57e-08,59;CL:0002087,1.12e-07,115;CL:0002009,1.25e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;4.25e-09;42 | |||
|ontology_enrichment_disease=DOID:1749!4.24e-14!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.84e-09!80;UBERON:0003729!2.32e-08!5;UBERON:0001474!4.82e-08!86;UBERON:0000344!9.11e-08!12;UBERON:0002390!3.75e-07!102;UBERON:0003061!3.75e-07!102;UBERON:0002193!4.63e-07!112;UBERON:0003343!5.09e-07!4;UBERON:0004785!5.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;9.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.83e-15,76;UBERON:0001474,9.13e-14,82;UBERON:0004765,2.04e-12,90;UBERON:0002405,5.71e-12,93;UBERON:0002390,2.76e-11,98;UBERON:0003061,2.76e-11,98;UBERON:0001434,4.97e-11,100;UBERON:0002193,4.21e-10,108;UBERON:0002204,3.15e-07,167 | |||
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| ||
|short_description=p2@ADRB2 | |||
}} | }} |
Latest revision as of 00:41, 16 September 2015
Short description: | p2@ADRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADRB2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 161bp_to_AY136741_5end |
EntrezGene: | ADRB2 |
HGNC: | 286 |
UniProt: | P07550 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.93e-34 | 5 |
basophil mast progenitor cell | 3.93e-34 | 5 |
endocrine cell | 4.02e-19 | 9 |
myeloid lineage restricted progenitor cell | 2.00e-17 | 66 |
granulocyte monocyte progenitor cell | 3.80e-17 | 67 |
myeloid leukocyte | 7.25e-16 | 72 |
natural killer cell | 1.95e-15 | 3 |
pro-NK cell | 1.95e-15 | 3 |
hematopoietic lineage restricted progenitor cell | 5.30e-15 | 120 |
leukocyte | 5.25e-13 | 136 |
classical monocyte | 1.37e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-11 | 42 |
hematopoietic oligopotent progenitor cell | 1.13e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-10 | 161 |
hematopoietic stem cell | 3.85e-10 | 168 |
myeloid cell | 4.21e-10 | 108 |
common myeloid progenitor | 4.21e-10 | 108 |
defensive cell | 4.66e-10 | 48 |
phagocyte | 4.66e-10 | 48 |
hematopoietic cell | 1.61e-09 | 177 |
monopoietic cell | 6.57e-08 | 59 |
monocyte | 6.57e-08 | 59 |
monoblast | 6.57e-08 | 59 |
promonocyte | 6.57e-08 | 59 |
nongranular leukocyte | 1.12e-07 | 115 |
macrophage dendritic cell progenitor | 1.25e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.83e-15 | 76 |
bone element | 9.13e-14 | 82 |
skeletal element | 2.04e-12 | 90 |
immune system | 5.71e-12 | 93 |
hematopoietic system | 2.76e-11 | 98 |
blood island | 2.76e-11 | 98 |
skeletal system | 4.97e-11 | 100 |
hemolymphoid system | 4.21e-10 | 108 |
musculoskeletal system | 3.15e-07 | 167 |