FFCP PHASE1:Hg19::chr14:74946794..74946851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100616211 | |EntrezGene=100616211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41690 | |HGNC=41690 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_NR_039858_5end | |association_with_transcript=55bp_to_NR_039858_5end | ||
|cluster_id=chr14:74946794..74946851,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_1_at_MIR4709_5end | |description=CAGE_peak_1_at_MIR4709_5end | ||
|id=chr14:74946794..74946851,- | |id=chr14:74946794..74946851,- | ||
|ontology_enrichment_celltype=CL:0002194!1.41e-18!63;CL:0000576!1.41e-18!63;CL:0000040!1.41e-18!63;CL:0000559!1.41e-18!63;CL:0002009!2.41e-17!65;CL:0000839!1.27e-15!70;CL:0002057!1.78e-15!42;CL:0000557!2.66e-15!71;CL:0000860!1.75e-13!45;CL:0000766!3.14e-13!76 | |ontology_enrichment_celltype=CL:0002194!1.41e-18!63;CL:0000576!1.41e-18!63;CL:0000040!1.41e-18!63;CL:0000559!1.41e-18!63;CL:0002009!2.41e-17!65;CL:0000839!1.27e-15!70;CL:0002057!1.78e-15!42;CL:0000557!2.66e-15!71;CL:0000860!1.75e-13!45;CL:0000766!3.14e-13!76 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.36e-23;39!CL:0000234;8.36e-23;39!CL:0000860;5.98e-21;33!CL:0002057;5.98e-21;33!CL:0000576;1.63e-13;48!CL:0000766;5.83e-09;69!CL:0000235;1.70e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.92e-29,59;CL:0000576,9.92e-29,59;CL:0000040,9.92e-29,59;CL:0000559,9.92e-29,59;CL:0002009,2.90e-27,61;CL:0000473,2.72e-26,48;CL:0000234,2.72e-26,48;CL:0000839,5.30e-24,66;CL:0000557,2.07e-23,67;CL:0000766,1.03e-20,72;CL:0000860,4.65e-20,42;CL:0002057,4.65e-20,42;CL:0000763,1.05e-12,108;CL:0000049,1.05e-12,108;CL:0002087,5.82e-09,115;CL:0000235,1.60e-08,6;CL:0002031,4.56e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.53e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.09e-14!80;UBERON:0001474!7.87e-13!86;UBERON:0002405!3.39e-10!115;UBERON:0002193!1.89e-09!112;UBERON:0004765!2.04e-09!101;UBERON:0001434!2.04e-09!101;UBERON:0002390!5.80e-09!102;UBERON:0003061!5.80e-09!102;UBERON:0000062!3.13e-08!511 | |ontology_enrichment_uberon=UBERON:0002371!3.09e-14!80;UBERON:0001474!7.87e-13!86;UBERON:0002405!3.39e-10!115;UBERON:0002193!1.89e-09!112;UBERON:0004765!2.04e-09!101;UBERON:0001434!2.04e-09!101;UBERON:0002390!5.80e-09!102;UBERON:0003061!5.80e-09!102;UBERON:0000062!3.13e-08!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.13e-21,76;UBERON:0001474,1.54e-19,82;UBERON:0002405,9.20e-19,93;UBERON:0004765,1.56e-17,90;UBERON:0002193,1.77e-15,108;UBERON:0001434,6.75e-15,100;UBERON:0002390,1.67e-14,98;UBERON:0003061,1.67e-14,98;UBERON:0003081,2.84e-10,203;UBERON:0002204,1.38e-09,167;UBERON:0000926,3.08e-07,315;UBERON:0004120,3.08e-07,315;UBERON:0006603,3.08e-07,315 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0.893922188854576,1.74467704820074,0,1.26343974685366,0.522371256399677,0.491467873003018,0.697801167972428,1.09220686065086,1.84636884759917,0.495065411840187,0.662794751455832,0,0,0,1.46379839637152,0.61560529038394,0.816002764977012,0.626909442956176,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0.284338464974843,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,3.58264758783879,3.56283032620878,6.95454032612304,2.90796477559129,3.02300754951048,3.15359279544161,2.09186133215116,2.05583944010913,2.78735733805593,3.45230870786581,3.33008918487831,1.6553756092201,1.72372840368309,1.93645405075148,0,3.20011977222428,1.91034305040492,2.69668181334102,3.06083892370903,1.28371610830437,4.47535988059329,2.63881040149373,4.18873681005427,5.54092175692502,4.64334781805734,1.70215567407342,1.86846674698672,4.77372463987812,4.69334626578181,2.38907729175628,1.21079900526674,1.10483290796269,2.21523671208619,0.845021145247767,1.27562579979026,0.838634582033504,0.22465726229299,0.901061357049038,0.48217676009124,0.570025487482497,0.79566670879636,1.27864907635244,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,0,0,0.270803863765016,0.640456598628376,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0.267540828089713,2.09071047609954,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,7.31420598941885,2.01210257911091,0.12786256184353,1.80719576192283,0,0.434539556882471,0,0.973269740605272,0.661743720148475,0.886917589850256,1.75669571386252,0.196468613246569,0.728590576585084,1.48313777113772,2.27183175558278,1.74129737299267,2.92507513141503,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0.516833518338658,1.42306505074684,1.33888245105868,0.402829317109147,0.760272105718513,1.70843440283719,0,0.81014194788176,0.625098097988558,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.886413581652058,0.397227542439656,3.72887606973458,0.354668382198357,1.12135520028461,2.1349799145941,0.98667019366864,0.311211035399766,0.269421344139376,0.980771418680752,0.605429710579726,0,0,0.936480230490962,0.570471821544449,3.43731965269142,0.117434498643765,0.161872944368132,0,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0.794025282120147,0.538168907066586,0,0.635795703478686,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.184099797284599,0.323292113637624,1.42003837006646,0.201504196455281,0.339121184620975,1.73934767846967,0.545492241181669,1.14721838155602,0.731842236777572,0.927708378250397,1.39432731443422,1.0366105501537,0.504641701751257,1.09493207722749,0,0.643240938192885,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.404493924480493,0.98110732562673,0.38474715694639,0.738155454624648,0,0,0,0,0.982827216677626,2.36315962672562,0,0.491953754172454,0.514703430895577,0.768251997860379,0,1.80952150340936,0.462942225792648,0,0,0,0.463721619900307,0.70445216541493,0.866198686566443,1.38895653772983,1.52203321787679,0,0.858486162094873,3.44703808522356,2.57404691653161,3.12125440806329,0,0,0,0.179117045405697,1.16253575405585,0.766765358330422,0,0.44024217006613,0.207328115540772,0.432359860250884,0.75745460055828,0.126995788584338,0.381988425558278,0,1.71072446022705,1.02827492703324,2.10240140490742,0.857479297891735,0,0.87192013766656,0.1466765716419,0.904902010304444,0,2.535908257668,1.86156681609409,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,1.50719688529793,0,2.0994328148232,31.6221829667095,20.5925407487172,56.9251636604185,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.537182889719687,0.784596007954691,0,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0,0,0.749007023947182,0,0.414415513436035,0.36807447515742,4.00136416847742,0.271265023699736,0.623912584592421,0.356857977594324,1.10391690523754,1.40569697991256,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.60818530127658,0.979005787313703,0.343143423810856,0,0.862856803274467,0.320182673410333,1.21251028578504,0,2.11673205330776,0.496215615637554,0.153461973288062,1.12264037773229,0.896974044789907,1.02341449813341,0.804269605718038,0,0.154209693802656,0.355123450626254,0.164254312027618,1.03850885836724,0.348631135379878,0.362578348774867,0.200506470303285,0.920809889358963,0,0.910455840033585,0.655622074797121,0,0.770153371044148,0,1.46139224653261,0.527758144464379,0,1.36074964221213,0.431831832204279,0,0.541892875087706,0,0.509752546090077,0,0.895499018888713,0,0,0.5129002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|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0.893922188854576,1.74467704820074,0,1.26343974685366,0.522371256399677,0.491467873003018,0.697801167972428,1.09220686065086,1.84636884759917,0.495065411840187,0.662794751455832,0,0,0,1.46379839637152,0.61560529038394,0.816002764977012,0.626909442956176,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0.284338464974843,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,3.58264758783879,3.56283032620878,6.95454032612304,2.90796477559129,3.02300754951048,3.15359279544161,2.09186133215116,2.05583944010913,2.78735733805593,3.45230870786581,3.33008918487831,1.6553756092201,1.72372840368309,1.93645405075148,0,3.20011977222428,1.91034305040492,2.69668181334102,3.06083892370903,1.28371610830437,4.47535988059329,2.63881040149373,4.18873681005427,5.54092175692502,4.64334781805734,1.70215567407342,1.86846674698672,4.77372463987812,4.69334626578181,2.38907729175628,1.21079900526674,1.10483290796269,2.21523671208619,0.845021145247767,1.27562579979026,0.838634582033504,0.22465726229299,0.901061357049038,0.48217676009124,0.570025487482497,0.79566670879636,1.27864907635244,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,0,0,0.270803863765016,0.640456598628376,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0.267540828089713,2.09071047609954,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,7.31420598941885,2.01210257911091,0.12786256184353,1.80719576192283,0,0.434539556882471,0,0.973269740605272,0.661743720148475,0.886917589850256,1.75669571386252,0.196468613246569,0.728590576585084,1.48313777113772,2.27183175558278,1.74129737299267,2.92507513141503,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0.516833518338658,1.42306505074684,1.33888245105868,0.402829317109147,0.760272105718513,1.70843440283719,0,0.81014194788176,0.625098097988558,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.886413581652058,0.397227542439656,3.72887606973458,0.354668382198357,1.12135520028461,2.1349799145941,0.98667019366864,0.311211035399766,0.269421344139376,0.980771418680752,0.605429710579726,0,0,0.936480230490962,0.570471821544449,3.43731965269142,0.117434498643765,0.161872944368132,0,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0.794025282120147,0.538168907066586,0,0.635795703478686,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.184099797284599,0.323292113637624,1.42003837006646,0.201504196455281,0.339121184620975,1.73934767846967,0.545492241181669,1.14721838155602,0.731842236777572,0.927708378250397,1.39432731443422,1.0366105501537,0.504641701751257,1.09493207722749,0,0.643240938192885,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.404493924480493,0.98110732562673,0.38474715694639,0.738155454624648,0,0,0,0,0.982827216677626,2.36315962672562,0,0.491953754172454,0.514703430895577,0.768251997860379,0,1.80952150340936,0.462942225792648,0,0,0,0.463721619900307,0.70445216541493,0.866198686566443,1.38895653772983,1.52203321787679,0,0.858486162094873,3.44703808522356,2.57404691653161,3.12125440806329,0,0,0,0.179117045405697,1.16253575405585,0.766765358330422,0,0.44024217006613,0.207328115540772,0.432359860250884,0.75745460055828,0.126995788584338,0.381988425558278,0,1.71072446022705,1.02827492703324,2.10240140490742,0.857479297891735,0,0.87192013766656,0.1466765716419,0.904902010304444,0,2.535908257668,1.86156681609409,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,1.50719688529793,0,2.0994328148232,31.6221829667095,20.5925407487172,56.9251636604185,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.537182889719687,0.784596007954691,0,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0,0,0.749007023947182,0,0.414415513436035,0.36807447515742,4.00136416847742,0.271265023699736,0.623912584592421,0.356857977594324,1.10391690523754,1.40569697991256,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.60818530127658,0.979005787313703,0.343143423810856,0,0.862856803274467,0.320182673410333,1.21251028578504,0,2.11673205330776,0.496215615637554,0.153461973288062,1.12264037773229,0.896974044789907,1.02341449813341,0.804269605718038,0,0.154209693802656,0.355123450626254,0.164254312027618,1.03850885836724,0.348631135379878,0.362578348774867,0.200506470303285,0.920809889358963,0,0.910455840033585,0.655622074797121,0,0.770153371044148,0,1.46139224653261,0.527758144464379,0,1.36074964221213,0.431831832204279,0,0.541892875087706,0,0.509752546090077,0,0.895499018888713,0,0,0.5129002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| ||
|short_description=p1@MIR4709 | |short_description=p1@MIR4709 | ||
}} | }} |
Latest revision as of 00:42, 16 September 2015
Short description: | p1@MIR4709 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4709_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 55bp_to_NR_039858_5end |
EntrezGene: | MIR4709 |
HGNC: | 41690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.92e-29 | 59 |
monocyte | 9.92e-29 | 59 |
monoblast | 9.92e-29 | 59 |
promonocyte | 9.92e-29 | 59 |
macrophage dendritic cell progenitor | 2.90e-27 | 61 |
defensive cell | 2.72e-26 | 48 |
phagocyte | 2.72e-26 | 48 |
myeloid lineage restricted progenitor cell | 5.30e-24 | 66 |
granulocyte monocyte progenitor cell | 2.07e-23 | 67 |
myeloid leukocyte | 1.03e-20 | 72 |
classical monocyte | 4.65e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.65e-20 | 42 |
myeloid cell | 1.05e-12 | 108 |
common myeloid progenitor | 1.05e-12 | 108 |
nongranular leukocyte | 5.82e-09 | 115 |
macrophage | 1.60e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 4.56e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.13e-21 | 76 |
bone element | 1.54e-19 | 82 |
immune system | 9.20e-19 | 93 |
skeletal element | 1.56e-17 | 90 |
hemolymphoid system | 1.77e-15 | 108 |
skeletal system | 6.75e-15 | 100 |
hematopoietic system | 1.67e-14 | 98 |
blood island | 1.67e-14 | 98 |
lateral plate mesoderm | 2.84e-10 | 203 |
musculoskeletal system | 1.38e-09 | 167 |
mesoderm | 3.08e-07 | 315 |
mesoderm-derived structure | 3.08e-07 | 315 |
presumptive mesoderm | 3.08e-07 | 315 |