FFCP PHASE2:Hg19::chr20:35974484..35974529,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6714 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11283 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11283 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 01:17, 16 September 2015
| Short description: | p2@SRC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SRC_5end |
| Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
| Association with transcript: | -8bp_to_ENST00000498178_5end |
| EntrezGene: | SRC |
| HGNC: | 11283 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SRC |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.95e-29 | 48 |
| phagocyte | 1.95e-29 | 48 |
| classical monocyte | 1.70e-26 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.70e-26 | 42 |
| macrophage dendritic cell progenitor | 1.90e-25 | 61 |
| monopoietic cell | 2.94e-24 | 59 |
| monocyte | 2.94e-24 | 59 |
| monoblast | 2.94e-24 | 59 |
| promonocyte | 2.94e-24 | 59 |
| granulocyte monocyte progenitor cell | 2.41e-21 | 67 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| developing anatomical structure | 1.94e-24 | 581 |
| embryo | 9.23e-24 | 592 |
| embryonic structure | 6.77e-23 | 564 |
| germ layer | 2.37e-22 | 560 |
| germ layer / neural crest | 2.37e-22 | 560 |
| embryonic tissue | 2.37e-22 | 560 |
| presumptive structure | 2.37e-22 | 560 |
| germ layer / neural crest derived structure | 2.37e-22 | 560 |
| epiblast (generic) | 2.37e-22 | 560 |
| bone marrow | 9.69e-19 | 76 |
Showing 1 to 10 of 22 entries
