FFCP PHASE1:Hg19::chr2:102686903..102686932,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:102686903..102686932,+ to FFCP PHASE1:Hg19::chr2:102686903..102686932,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3554 | |EntrezGene=3554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |HGNC=5993 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZW4,B8ZZ73 | |UniProt=B8ZZW4,B8ZZ73 | ||
|association_with_transcript=67bp_to_ENST00000409929,ENST00000424272,uc010fix.2_5end | |||
|cluster_id=chr2:102686903..102686932,+ | |||
|description=CAGE_peak_12_at_IL1R1_5end | |||
|id=chr2:102686903..102686932,+ | |||
|ontology_enrichment_celltype=CL:0002494!2.05e-07!16;CL:0000057!5.01e-07!75;CL:0000453!6.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;8.23e-21;5!CL:0000746;7.78e-13;3!CL:0000990;2.09e-11;8!CL:0000737;9.88e-10;4!CL:0000451;2.90e-09;10!CL:0001014;2.91e-09;2!CL:0001016;2.91e-09;2!CL:0000764;3.42e-09;2!CL:0000558;3.42e-09;2!CL:0002494;2.31e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.11e-21,5;CL:0000746,7.96e-13,3;CL:0000513,7.96e-13,3;CL:0000990,2.07e-11,8;CL:0000737,1.00e-09,4;CL:0001014,2.70e-09,2;CL:0001016,2.70e-09,2;CL:0000451,2.89e-09,10;CL:0000764,3.43e-09,2;CL:0000765,3.43e-09,2;CL:0000050,3.43e-09,2;CL:0000038,3.43e-09,2;CL:0000558,3.43e-09,2;CL:0000547,3.43e-09,2;CL:0000549,3.43e-09,2;CL:0000550,3.43e-09,2;CL:0000552,3.43e-09,2;CL:0002494,2.20e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000513;7.78e-13;3!UBERON:0007297;7.85e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.02e-07!347;UBERON:0002368!2.17e-07!35;UBERON:0002107!5.67e-07!19;UBERON:0006925!5.67e-07!19;UBERON:0008836!5.67e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.86e-16;4!UBERON:0006947;8.58e-13;3!UBERON:0004054;8.58e-13;3!UBERON:0003135;1.08e-12;11!UBERON:0002107;4.15e-09;19!UBERON:0006925;4.15e-09;19!UBERON:0002423;1.33e-08;25!UBERON:0000473;2.44e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.39e-16,4;UBERON:0006947,6.27e-13,3;UBERON:0004054,6.27e-13,3;UBERON:0003135,9.43e-13,11;UBERON:0002107,4.36e-09,19;UBERON:0006925,4.36e-09,19;UBERON:0008836,4.36e-09,19;UBERON:0009497,1.55e-08,25;UBERON:0000015,1.55e-08,25;UBERON:0002423,1.55e-08,25;UBERON:0006235,1.55e-08,25;UBERON:0004161,1.55e-08,25;UBERON:0000473,2.54e-08,8;UBERON:0008835,1.03e-07,22;UBERON:0003894,1.03e-07,22;UBERON:0009854,2.46e-07,23;UBERON:0000948,3.73e-07,24;UBERON:0005498,3.73e-07,24;UBERON:0004140,3.73e-07,24;UBERON:0009881,3.73e-07,24;UBERON:0004141,3.73e-07,24;UBERON:0003084,3.73e-07,24;UBERON:0007005,3.73e-07,24;UBERON:0004139,3.73e-07,24;UBERON:0004291,3.73e-07,24 | |||
|phase1_expression=0.908391896352783,1.2846031433459,2.11431606143957,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,7.37770945674,3.06870148424473,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,2.03017567021455,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.32409180813219,0.860509862246441,0.709336764396714,0.560677600142307,0,0,5.29058760179603,1.48181739276657,2.94231425604226,0.454072282934794,0,0,0.312160076830321,0,0.298897361103602,0.352303495931295,0,0,1.63323337003915,0,1.65321249881225,0,0.741800787835671,0,0.718618141816238,0,0,0.831192346452549,0,0,0,2.38207584636044,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.441175890929576,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,1.6462960453256,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43062589218851,0.542621605391443,0.823240336780769,0.65147236858747,0.355391948742546,0.791951872933429,5.42590878707255,0,1.69954085009497,0,0,0,0,0,0,1.44781306667579,0.410952645100767,3.58121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.24053903909388,0,0,0.384417447767103,0,0,0,0.308419387605311,0,0.821271560138091,1.03850885836724,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.70583811844821,0,0,0,0.515205058238611,0,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,2.57808587683857,0.435050081742686,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0.616067160352178,0,0,0,0.286249773483982,0,0,1.33441135746677,0,0.42793898803392,0.318203247925937,0,0,0.54907405947211,0.353437207037059,0.404364963146632,0,0,0,0.487426979262569,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,1.81284261649436,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0.797594390929008,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,2.67058417487502,11.8375320854817,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,1.99226682220855,0,0,0.195984794828755,0,1.7472666824203,0,0.387025325156341,0.0730893170861856,0.328461828212837,0,0,0.225980740780532,0,0,0,0,1.04206466326994,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0,0.815985741090574,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.472699093843342,0.494495150286999,0.404421263125109,1.37798474120648,0,0,0.408610218334727,0,0,0,4.72445172258151,5.41661368190565,0.121499113316049,0,0.945668487590378,0,0,0.896436696664224,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.679872549120754,10.2586563574658,0,0.258565912723101,0.13223260174269,1.53978154095896,2.11444506695002,0.320362237703084,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0.983617892129413,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0.754703705257725,0,0.228840068396924,0.756154618816195,0.621748802331122,0.591420599958536,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0,0,0,1.60011105865261,0.343395705182793,0.673498977531838,0,0.385239660814607,0.643324774124777,0,0.226705925512272,0,0,0,0,0.877136198314828,0.176689145945881,0.192914038270915,0,0,0,0,0,7.20983142705737,6.64324201566815,5.23409261618701,0.982829546539238,0.245772908753719,0,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,0,1.531227386766,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0.383287282918786,0.535701835878287,0.336283722218824,0,0.227662191351298,0.887023701626388,0,8.91737649074576,0.203909198930495,0,0,0,0.235479278551542,0,0,0,0.863710364874486,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,6.35080575286394,1.3746412112643,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.257831551894309,0,0,0,0.0802413666891683,0,0,0.716697915757256,0,0,0,0.5290268405154,0,1.84870251452567,0,0,0,0,0,0,0,0,4.01627100556669,3.21556956187414,0,0.103432995861895,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.381882949668989,0.202117188958219,0.217716747896961,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.908391896352783,1.2846031433459,2.11431606143957,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,7.37770945674,3.06870148424473,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,2.03017567021455,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.32409180813219,0.860509862246441,0.709336764396714,0.560677600142307,0,0,5.29058760179603,1.48181739276657,2.94231425604226,0.454072282934794,0,0,0.312160076830321,0,0.298897361103602,0.352303495931295,0,0,1.63323337003915,0,1.65321249881225,0,0.741800787835671,0,0.718618141816238,0,0,0.831192346452549,0,0,0,2.38207584636044,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.441175890929576,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,1.6462960453256,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43062589218851,0.542621605391443,0.823240336780769,0.65147236858747,0.355391948742546,0.791951872933429,5.42590878707255,0,1.69954085009497,0,0,0,0,0,0,1.44781306667579,0.410952645100767,3.58121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.24053903909388,0,0,0.384417447767103,0,0,0,0.308419387605311,0,0.821271560138091,1.03850885836724,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.70583811844821,0,0,0,0.515205058238611,0,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,2.57808587683857,0.435050081742686,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0.616067160352178,0,0,0,0.286249773483982,0,0,1.33441135746677,0,0.42793898803392,0.318203247925937,0,0,0.54907405947211,0.353437207037059,0.404364963146632,0,0,0,0.487426979262569,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,1.81284261649436,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0.797594390929008,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,2.67058417487502,11.8375320854817,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,1.99226682220855,0,0,0.195984794828755,0,1.7472666824203,0,0.387025325156341,0.0730893170861856,0.328461828212837,0,0,0.225980740780532,0,0,0,0,1.04206466326994,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0,0.815985741090574,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.472699093843342,0.494495150286999,0.404421263125109,1.37798474120648,0,0,0.408610218334727,0,0,0,4.72445172258151,5.41661368190565,0.121499113316049,0,0.945668487590378,0,0,0.896436696664224,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.679872549120754,10.2586563574658,0,0.258565912723101,0.13223260174269,1.53978154095896,2.11444506695002,0.320362237703084,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0.983617892129413,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0.754703705257725,0,0.228840068396924,0.756154618816195,0.621748802331122,0.591420599958536,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0,0,0,1.60011105865261,0.343395705182793,0.673498977531838,0,0.385239660814607,0.643324774124777,0,0.226705925512272,0,0,0,0,0.877136198314828,0.176689145945881,0.192914038270915,0,0,0,0,0,7.20983142705737,6.64324201566815,5.23409261618701,0.982829546539238,0.245772908753719,0,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,0,1.531227386766,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0.383287282918786,0.535701835878287,0.336283722218824,0,0.227662191351298,0.887023701626388,0,8.91737649074576,0.203909198930495,0,0,0,0.235479278551542,0,0,0,0.863710364874486,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,6.35080575286394,1.3746412112643,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.257831551894309,0,0,0,0.0802413666891683,0,0,0.716697915757256,0,0,0,0.5290268405154,0,1.84870251452567,0,0,0,0,0,0,0,0,4.01627100556669,3.21556956187414,0,0.103432995861895,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.381882949668989,0.202117188958219,0.217716747896961,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p12@IL1R1 | |||
}} | }} |
Latest revision as of 01:17, 16 September 2015
Short description: | p12@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_ENST00000409929, ENST00000424272, uc010fix.2_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | B8ZZW4B8ZZ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 8.11e-21 | 5 |
cardiac muscle cell | 7.96e-13 | 3 |
cardiac muscle myoblast | 7.96e-13 | 3 |
conventional dendritic cell | 2.07e-11 | 8 |
striated muscle cell | 1.00e-09 | 4 |
CD1a-positive Langerhans cell | 2.70e-09 | 2 |
immature CD1a-positive Langerhans cell | 2.70e-09 | 2 |
dendritic cell | 2.89e-09 | 10 |
erythroid lineage cell | 3.43e-09 | 2 |
erythroblast | 3.43e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 3.43e-09 | 2 |
erythroid progenitor cell | 3.43e-09 | 2 |
reticulocyte | 3.43e-09 | 2 |
proerythroblast | 3.43e-09 | 2 |
basophilic erythroblast | 3.43e-09 | 2 |
polychromatophilic erythroblast | 3.43e-09 | 2 |
orthochromatic erythroblast | 3.43e-09 | 2 |
cardiocyte | 2.20e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.39e-16 | 4 |
male genital duct | 6.27e-13 | 3 |
internal male genitalia | 6.27e-13 | 3 |
male reproductive organ | 9.43e-13 | 11 |
liver | 4.36e-09 | 19 |
digestive gland | 4.36e-09 | 19 |
liver bud | 4.36e-09 | 19 |
epithelium of foregut-midgut junction | 1.55e-08 | 25 |
anatomical boundary | 1.55e-08 | 25 |
hepatobiliary system | 1.55e-08 | 25 |
foregut-midgut junction | 1.55e-08 | 25 |
septum transversum | 1.55e-08 | 25 |
testis | 2.54e-08 | 8 |
hepatic diverticulum | 1.03e-07 | 22 |
liver primordium | 1.03e-07 | 22 |
digestive tract diverticulum | 2.46e-07 | 23 |
heart | 3.73e-07 | 24 |
primitive heart tube | 3.73e-07 | 24 |
primary heart field | 3.73e-07 | 24 |
anterior lateral plate mesoderm | 3.73e-07 | 24 |
heart tube | 3.73e-07 | 24 |
heart primordium | 3.73e-07 | 24 |
cardiac mesoderm | 3.73e-07 | 24 |
cardiogenic plate | 3.73e-07 | 24 |
heart rudiment | 3.73e-07 | 24 |