FFCP PHASE1:Hg19::chrX:55620497..55620512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=139628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:55620497..55620512,+ | |||
|coexpression_cluster_id=C2959 | |coexpression_cluster_id=C2959 | ||
|description= | |description=CAGE_peak_1_at_FOXR2_5end | ||
|id=chrX:55620497..55620512,+ | |id=chrX:55620497..55620512,+ | ||
|ontology_enrichment_celltype=CL:0000054!5.74e-08!2;CL:0000137!5.74e-08!2;CL:0000092!5.74e-08!2;CL:1000415!7.03e-08!2 | |ontology_enrichment_celltype=CL:0000054!5.74e-08!2;CL:0000137!5.74e-08!2;CL:0000092!5.74e-08!2;CL:1000415!7.03e-08!2 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0000014,9.63e-07,4 | |ontology_enrichment_uberon_v019_2=UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0000014,9.63e-07,4 | ||
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|short_description= | |short_description=p1@FOXR2 | ||
}} | }} |
Latest revision as of 02:00, 16 September 2015
Short description: | p1@FOXR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXR2_5end |
Coexpression cluster: | C2959_fibrosarcoma_gastric_teratocarcinoma_thyroid_bronchioalveolar_pagetoid_adult |
Association with transcript: | NA |
EntrezGene: | FOXR2 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.24e-12 | 2 |
osteocyte | 3.24e-12 | 2 |
osteoclast | 3.24e-12 | 2 |
epithelial cell of stomach | 8.96e-09 | 3 |
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 5.13e-23 | 1 |
skin benign neoplasm | 5.13e-23 | 1 |
integumentary system benign neoplasm | 5.13e-23 | 1 |
dermis tumor | 5.13e-23 | 1 |
cutaneous fibrous histiocytoma | 5.13e-23 | 1 |
lung adenocarcinoma | 2.32e-12 | 2 |
giant cell tumor | 3.24e-12 | 2 |
bone giant cell tumor | 3.24e-12 | 2 |
benign neoplasm | 9.63e-07 | 4 |