FFCP PHASE1:Hg19::chr1:111742809..111742819,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:111742809..111742819,-
|short_description=p12@DENND2D
|description=CAGE_peak_12_at_DENND2D_5end
|association_with_transcript=45bp_to_ENST00000488786_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79961 | |EntrezGene=79961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26192 | |HGNC=26192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000488786_5end | |||
|cluster_id=chr1:111742809..111742819,- | |||
|coexpression_cluster_id=C1017 | |||
|description=CAGE_peak_12_at_DENND2D_5end | |||
|id=chr1:111742809..111742819,- | |||
|ontology_enrichment_celltype=CL:0002031!2.08e-45!124;CL:0000839!1.20e-44!70;CL:0000738!3.56e-44!140;CL:0000766!5.42e-44!76;CL:0002087!6.81e-44!119;CL:0000557!8.01e-44!71;CL:0002194!5.37e-41!63;CL:0000576!5.37e-41!63;CL:0000040!5.37e-41!63;CL:0000559!5.37e-41!63;CL:0002009!2.39e-39!65;CL:0000037!1.22e-37!172;CL:0000566!1.22e-37!172;CL:0002032!2.59e-37!165;CL:0000837!2.59e-37!165;CL:0000988!1.85e-34!182;CL:0000763!7.22e-31!112;CL:0000049!7.22e-31!112;CL:0002057!9.53e-31!42;CL:0000860!4.45e-28!45;CL:0000134!2.60e-08!358;CL:0002320!7.78e-08!365;CL:0000235!2.74e-07!10;CL:0002619!2.88e-07!3;CL:0000838!6.22e-07!52;CL:0002274!7.48e-07!5;CL:0000457!7.48e-07!5;CL:0002191!7.48e-07!5;CL:0000097!7.48e-07!5;CL:0000831!7.48e-07!5;CL:0002028!7.48e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.43e-35;6!CL:0000473;1.88e-34;39!CL:0000234;1.88e-34;39!CL:0000860;1.57e-21;33!CL:0002057;1.57e-21;33!CL:0000766;1.63e-21;69!CL:0002619;3.32e-18;3!CL:0000576;6.15e-17;48!CL:0000763;3.21e-09;100!CL:0000738;3.95e-07;136!CL:0000946;5.12e-07;1!CL:0000786;5.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.19e-48,66;CL:0000557,7.36e-48,67;CL:0002194,4.82e-46,59;CL:0000576,4.82e-46,59;CL:0000040,4.82e-46,59;CL:0000559,4.82e-46,59;CL:0002009,2.11e-44,61;CL:0000766,3.13e-44,72;CL:0000473,6.00e-35,48;CL:0000234,6.00e-35,48;CL:0000235,1.48e-34,6;CL:0002031,1.83e-34,120;CL:0002087,7.55e-31,115;CL:0000763,1.88e-30,108;CL:0000049,1.88e-30,108;CL:0000738,8.88e-30,136;CL:0002032,2.68e-26,161;CL:0000837,2.68e-26,161;CL:0000037,5.72e-25,168;CL:0000988,2.06e-23,177;CL:0002619,3.35e-18,3;CL:0000860,2.94e-17,42;CL:0002057,2.94e-17,42;CL:0000134,8.60e-09,354;CL:0002320,1.66e-08,361;CL:0000219,1.69e-07,386;CL:0000946,6.49e-07,1;CL:0000786,6.49e-07,1;CL:0000980,6.49e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-15;42!CL:0000049;5.16e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.23e-46!102;UBERON:0003061!3.23e-46!102;UBERON:0002193!3.55e-44!112;UBERON:0002371!2.48e-37!80;UBERON:0001474!9.16e-34!86;UBERON:0002405!1.07e-32!115;UBERON:0004765!1.02e-26!101;UBERON:0001434!1.02e-26!101;UBERON:0003081!1.19e-14!216;UBERON:0002204!4.08e-11!167;UBERON:0004177!1.59e-08!7;UBERON:0002384!1.17e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.14e-41,76;UBERON:0002390,4.21e-40,98;UBERON:0003061,4.21e-40,98;UBERON:0001474,2.77e-38,82;UBERON:0002405,2.93e-36,93;UBERON:0002193,6.45e-36,108;UBERON:0004765,1.82e-34,90;UBERON:0001434,1.52e-30,100;UBERON:0003081,1.38e-16,203;UBERON:0002204,2.70e-16,167;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0002384,4.07e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,1.80621296789881,1.25937250101887,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,4.25439401055856,1.94336199611388,1.03030227053675,0.145398238779565,0,0.242584061187816,2.32429036905685,1.23350366406548,1.54853185447552,0,1.0246428261164,0.945928919554341,1.72372840368309,1.93645405075148,0,0.752969358170419,1.36453075028923,0.898893937780338,0.306083892370903,1.92557416245656,0,0.329851300186716,1.19678194572979,0,0.870627715885752,0.56738522469114,0.622822248995575,0.502497330513487,0,1.52032191293582,0,3.31449872388808,1.26584954976354,0,0.425208599930087,0.419317291016752,0.112328631146495,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0.512365278902701,0.520237390239513,1.47994114143309,2.21080014228679,0.289803085735052,0,0,0,0.679856056185397,0,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0.602300476311091,0.76791966692651,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,0.348259474598534,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,2.34004265139238,1.0404181360211,0,0,0,0,0,0,0,0.968532774145487,1.4512968087854,0.720599767084807,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.51579964002488,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,1.36771666781428,0,0,0,0.33307196799782,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.640724475406168,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,1.26757386311357,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751871343838829,0.257831551894309,1.99882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0.12729431655633,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p12@DENND2D | |||
}} | }} |
Latest revision as of 02:44, 16 September 2015
Short description: | p12@DENND2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DENND2D_5end |
Coexpression cluster: | C1017_CD14_Macrophage_Monocytederived_Mast_Dendritic_B_splenic |
Association with transcript: | 45bp_to_ENST00000488786_5end |
EntrezGene: | DENND2D |
HGNC: | 26192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.19e-48 | 66 |
granulocyte monocyte progenitor cell | 7.36e-48 | 67 |
monopoietic cell | 4.82e-46 | 59 |
monocyte | 4.82e-46 | 59 |
monoblast | 4.82e-46 | 59 |
promonocyte | 4.82e-46 | 59 |
macrophage dendritic cell progenitor | 2.11e-44 | 61 |
myeloid leukocyte | 3.13e-44 | 72 |
defensive cell | 6.00e-35 | 48 |
phagocyte | 6.00e-35 | 48 |
macrophage | 1.48e-34 | 6 |
hematopoietic lineage restricted progenitor cell | 1.83e-34 | 120 |
nongranular leukocyte | 7.55e-31 | 115 |
myeloid cell | 1.88e-30 | 108 |
common myeloid progenitor | 1.88e-30 | 108 |
leukocyte | 8.88e-30 | 136 |
hematopoietic oligopotent progenitor cell | 2.68e-26 | 161 |
hematopoietic multipotent progenitor cell | 2.68e-26 | 161 |
hematopoietic stem cell | 5.72e-25 | 168 |
hematopoietic cell | 2.06e-23 | 177 |
adult endothelial progenitor cell | 3.35e-18 | 3 |
classical monocyte | 2.94e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-17 | 42 |
mesenchymal cell | 8.60e-09 | 354 |
connective tissue cell | 1.66e-08 | 361 |
motile cell | 1.69e-07 | 386 |
antibody secreting cell | 6.49e-07 | 1 |
plasma cell | 6.49e-07 | 1 |
plasmablast | 6.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.14e-41 | 76 |
hematopoietic system | 4.21e-40 | 98 |
blood island | 4.21e-40 | 98 |
bone element | 2.77e-38 | 82 |
immune system | 2.93e-36 | 93 |
hemolymphoid system | 6.45e-36 | 108 |
skeletal element | 1.82e-34 | 90 |
skeletal system | 1.52e-30 | 100 |
lateral plate mesoderm | 1.38e-16 | 203 |
musculoskeletal system | 2.70e-16 | 167 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |
connective tissue | 4.07e-08 | 371 |