FFCP PHASE1:Hg19::chr20:3869562..3869580,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:3869562..3869580,+ to FFCP PHASE1:Hg19::chr20:3869562..3869580,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80025 | |EntrezGene=80025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15894 | |HGNC=15894 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495692_5end | |||
|cluster_id=chr20:3869562..3869580,+ | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_3_at_PANK2_5end | |||
|id=chr20:3869562..3869580,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.25e-22!45;CL:0002057!1.90e-22!42;CL:0002194!9.42e-17!63;CL:0000576!9.42e-17!63;CL:0000040!9.42e-17!63;CL:0000559!9.42e-17!63;CL:0002009!4.66e-16!65;CL:0000557!3.53e-14!71;CL:0000839!2.21e-13!70;CL:0000766!3.83e-11!76;CL:0002087!3.33e-10!119;CL:0000763!8.59e-10!112;CL:0000049!8.59e-10!112;CL:0000012!6.72e-09!682;CL:0000548!8.52e-09!679;CL:0000004!8.52e-09!679;CL:0000255!8.52e-09!679;CL:0002031!5.85e-08!124;CL:0000066!6.00e-07!254;CL:0002032!6.28e-07!165;CL:0000837!6.28e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-20;33!CL:0002057;1.65e-20;33!CL:0000576;4.60e-17;48!CL:0000473;8.31e-14;39!CL:0000234;8.31e-14;39!CL:0000766;3.44e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.69e-30,42;CL:0002057,5.69e-30,42;CL:0000473,5.60e-25,48;CL:0000234,5.60e-25,48;CL:0002194,6.61e-21,59;CL:0000576,6.61e-21,59;CL:0000040,6.61e-21,59;CL:0000559,6.61e-21,59;CL:0002009,1.37e-19,61;CL:0000557,9.17e-18,67;CL:0000839,1.46e-17,66;CL:0000766,3.36e-16,72;CL:0002087,7.71e-14,115;CL:0000763,1.28e-12,108;CL:0000049,1.28e-12,108;CL:0002031,3.09e-11,120;CL:0000738,1.25e-10,136;CL:0002032,7.74e-10,161;CL:0000837,7.74e-10,161;CL:0000037,1.01e-09,168;CL:0000988,1.21e-08,177;CL:0002393,4.08e-08,9;CL:0002397,4.08e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.26e-21;42 | |||
|ontology_enrichment_disease=DOID:305!7.91e-10!106;DOID:162!5.18e-09!235;DOID:14566!7.40e-09!239;DOID:0050687!1.99e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.44e-09,106;DOID:162,8.61e-08,235;DOID:14566,9.80e-08,239;DOID:0050687,3.84e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002405!3.30e-13!115;UBERON:0002371!1.03e-10!80;UBERON:0001474!1.05e-09!86;UBERON:0002390!1.17e-09!102;UBERON:0003061!1.17e-09!102;UBERON:0002193!1.16e-08!112;UBERON:0004765!1.58e-08!101;UBERON:0001434!1.58e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.63e-14,76;UBERON:0002390,1.41e-13,98;UBERON:0003061,1.41e-13,98;UBERON:0004765,3.78e-13,90;UBERON:0001474,9.53e-13,82;UBERON:0002405,1.56e-11,93;UBERON:0002193,1.68e-11,108;UBERON:0001434,1.62e-10,100;UBERON:0009854,1.20e-07,23;UBERON:0009856,1.75e-07,26;UBERON:0008835,2.09e-07,22;UBERON:0003894,2.09e-07,22;UBERON:0007499,3.05e-07,25 | |||
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| ||
|short_description=p3@PANK2 | |||
}} | }} |
Latest revision as of 04:43, 16 September 2015
Short description: | p3@PANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PANK2_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 0bp_to_ENST00000495692_5end |
EntrezGene: | PANK2 |
HGNC: | 15894 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.69e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.69e-30 | 42 |
defensive cell | 5.60e-25 | 48 |
phagocyte | 5.60e-25 | 48 |
monopoietic cell | 6.61e-21 | 59 |
monocyte | 6.61e-21 | 59 |
monoblast | 6.61e-21 | 59 |
promonocyte | 6.61e-21 | 59 |
macrophage dendritic cell progenitor | 1.37e-19 | 61 |
granulocyte monocyte progenitor cell | 9.17e-18 | 67 |
myeloid lineage restricted progenitor cell | 1.46e-17 | 66 |
myeloid leukocyte | 3.36e-16 | 72 |
nongranular leukocyte | 7.71e-14 | 115 |
myeloid cell | 1.28e-12 | 108 |
common myeloid progenitor | 1.28e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 3.09e-11 | 120 |
leukocyte | 1.25e-10 | 136 |
hematopoietic oligopotent progenitor cell | 7.74e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.74e-10 | 161 |
hematopoietic stem cell | 1.01e-09 | 168 |
hematopoietic cell | 1.21e-08 | 177 |
intermediate monocyte | 4.08e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.08e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.63e-14 | 76 |
hematopoietic system | 1.41e-13 | 98 |
blood island | 1.41e-13 | 98 |
skeletal element | 3.78e-13 | 90 |
bone element | 9.53e-13 | 82 |
immune system | 1.56e-11 | 93 |
hemolymphoid system | 1.68e-11 | 108 |
skeletal system | 1.62e-10 | 100 |
digestive tract diverticulum | 1.20e-07 | 23 |
sac | 1.75e-07 | 26 |
hepatic diverticulum | 2.09e-07 | 22 |
liver primordium | 2.09e-07 | 22 |
epithelial sac | 3.05e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.44e-09 | 106 |
cancer | 8.61e-08 | 235 |
disease of cellular proliferation | 9.80e-08 | 239 |
cell type cancer | 3.84e-07 | 143 |