FFCP PHASE1:Hg19::chr7:128550736..128550768,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375616 | |EntrezGene=375616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17585 | |HGNC=17585 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZWJ8 | |UniProt=Q6ZWJ8 | ||
|association_with_transcript=4bp_to_ENST00000257704,ENST00000297801,ENST00000441244,ENST00000476647,ENST00000487494,NM_001135914,NM_199349,uc011kor.1,uc011kos.1_5end | |association_with_transcript=4bp_to_ENST00000257704,ENST00000297801,ENST00000441244,ENST00000476647,ENST00000487494,NM_001135914,NM_199349,uc011kor.1,uc011kos.1_5end | ||
|cluster_id=chr7:128550736..128550768,- | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_1_at_KCP_5end | |description=CAGE_peak_1_at_KCP_5end | ||
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|ontology_enrichment_celltype=CL:1000507!6.28e-12!12;CL:1000494!6.28e-12!12;CL:1000449!7.50e-10!16;CL:1000497!2.05e-08!18;CL:0002518!2.05e-08!18;CL:0002322!1.99e-07!5 | |ontology_enrichment_celltype=CL:1000507!6.28e-12!12;CL:1000494!6.28e-12!12;CL:1000449!7.50e-10!16;CL:1000497!2.05e-08!18;CL:0002518!2.05e-08!18;CL:0002322!1.99e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.41e-31;10!CL:1000494;4.41e-31;10!CL:1000449;5.00e-20;15!CL:1000497;1.99e-17;17!CL:0002518;1.99e-17;17!CL:0000669;1.72e-13;4!CL:0002681;3.26e-12;12!CL:0002584;3.26e-12;12!CL:0002322;2.39e-10;5!CL:0000239;6.91e-10;3!CL:1000615;6.91e-10;3!CL:0002306;6.91e-10;3!CL:0000650;1.01e-07;2!CL:1000500;1.01e-07;2!CL:1000618;1.01e-07;2!CL:1001318;1.01e-07;2!CL:0002173;1.01e-07;2!CL:0000039;1.43e-07;7!CL:0000586;1.43e-07;7!CL:0002575;1.92e-07;2 | |ontology_enrichment_celltype_v019=CL:1000507;4.41e-31;10!CL:1000494;4.41e-31;10!CL:1000449;5.00e-20;15!CL:1000497;1.99e-17;17!CL:0002518;1.99e-17;17!CL:0000669;1.72e-13;4!CL:0002681;3.26e-12;12!CL:0002584;3.26e-12;12!CL:0002322;2.39e-10;5!CL:0000239;6.91e-10;3!CL:1000615;6.91e-10;3!CL:0002306;6.91e-10;3!CL:0000650;1.01e-07;2!CL:1000500;1.01e-07;2!CL:1000618;1.01e-07;2!CL:1001318;1.01e-07;2!CL:0002173;1.01e-07;2!CL:0000039;1.43e-07;7!CL:0000586;1.43e-07;7!CL:0002575;1.92e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.14e-31,10;CL:1000494,2.14e-31,10;CL:1000449,3.13e-20,15;CL:1000497,1.32e-17,17;CL:0002518,1.32e-17,17;CL:0000669,1.82e-13,4;CL:0002681,2.47e-12,12;CL:0002584,2.47e-12,12;CL:0000239,3.21e-10,3;CL:1000615,3.21e-10,3;CL:0002306,3.21e-10,3;CL:0002322,3.36e-10,5;CL:0000650,1.08e-07,2;CL:1000500,1.08e-07,2;CL:1000618,1.08e-07,2;CL:1001318,1.08e-07,2;CL:0002173,1.08e-07,2;CL:0000039,1.43e-07,7;CL:0000586,1.43e-07,7;CL:0002575,1.90e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.94e-08;2 | |ontology_enrichment_development_v019=UBERON:0007297;3.94e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-15!115;UBERON:0003103!8.52e-13!69;UBERON:0000489!1.21e-12!32;UBERON:0004876!2.35e-12!20;UBERON:0000080!2.68e-12!18;UBERON:0002120!2.68e-12!18;UBERON:0004875!2.68e-12!18;UBERON:0005721!2.68e-12!18;UBERON:0005754!2.68e-12!18;UBERON:0007297!2.68e-12!18;UBERON:0009773!6.28e-12!12;UBERON:0001231!6.28e-12!12;UBERON:0004810!6.28e-12!12;UBERON:0003887!1.10e-11!21;UBERON:0002113!1.84e-11!27;UBERON:0003918!1.84e-11!27;UBERON:0005095!1.84e-11!27;UBERON:0007687!1.84e-11!27;UBERON:0006555!5.39e-11!17;UBERON:0005103!5.39e-11!17;UBERON:0000083!5.39e-11!17;UBERON:0009201!5.39e-11!17;UBERON:0004819!5.39e-11!17;UBERON:0006553!5.39e-11!17;UBERON:0003074!5.39e-11!17;UBERON:0003060!5.39e-11!17;UBERON:0003135!4.90e-10!11;UBERON:0004211!7.50e-10!16;UBERON:0001285!7.50e-10!16;UBERON:0007684!7.50e-10!16;UBERON:0003220!7.50e-10!16;UBERON:0004208!7.50e-10!16;UBERON:0003075!2.54e-09!86;UBERON:0007284!2.54e-09!86;UBERON:0000058!8.46e-09!26;UBERON:0002346!1.64e-08!90;UBERON:0003886!7.69e-08!63;UBERON:0005743!1.54e-07!86;UBERON:0000073!2.62e-07!94;UBERON:0001016!2.62e-07!94;UBERON:0000064!3.19e-07!219;UBERON:0000966!3.93e-07!5;UBERON:0005388!3.93e-07!5;UBERON:0001802!3.93e-07!5;UBERON:0006554!5.54e-07!44;UBERON:0003056!5.60e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.12e-15!115;UBERON:0003103!8.52e-13!69;UBERON:0000489!1.21e-12!32;UBERON:0004876!2.35e-12!20;UBERON:0000080!2.68e-12!18;UBERON:0002120!2.68e-12!18;UBERON:0004875!2.68e-12!18;UBERON:0005721!2.68e-12!18;UBERON:0005754!2.68e-12!18;UBERON:0007297!2.68e-12!18;UBERON:0009773!6.28e-12!12;UBERON:0001231!6.28e-12!12;UBERON:0004810!6.28e-12!12;UBERON:0003887!1.10e-11!21;UBERON:0002113!1.84e-11!27;UBERON:0003918!1.84e-11!27;UBERON:0005095!1.84e-11!27;UBERON:0007687!1.84e-11!27;UBERON:0006555!5.39e-11!17;UBERON:0005103!5.39e-11!17;UBERON:0000083!5.39e-11!17;UBERON:0009201!5.39e-11!17;UBERON:0004819!5.39e-11!17;UBERON:0006553!5.39e-11!17;UBERON:0003074!5.39e-11!17;UBERON:0003060!5.39e-11!17;UBERON:0003135!4.90e-10!11;UBERON:0004211!7.50e-10!16;UBERON:0001285!7.50e-10!16;UBERON:0007684!7.50e-10!16;UBERON:0003220!7.50e-10!16;UBERON:0004208!7.50e-10!16;UBERON:0003075!2.54e-09!86;UBERON:0007284!2.54e-09!86;UBERON:0000058!8.46e-09!26;UBERON:0002346!1.64e-08!90;UBERON:0003886!7.69e-08!63;UBERON:0005743!1.54e-07!86;UBERON:0000073!2.62e-07!94;UBERON:0001016!2.62e-07!94;UBERON:0000064!3.19e-07!219;UBERON:0000966!3.93e-07!5;UBERON:0005388!3.93e-07!5;UBERON:0001802!3.93e-07!5;UBERON:0006554!5.54e-07!44;UBERON:0003056!5.60e-07!61 | ||
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| ||
|short_description=p1@KCP | |short_description=p1@KCP | ||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p1@KCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCP_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 4bp_to_ENST00000257704, ENST00000297801, ENST00000441244, ENST00000476647, ENST00000487494, NM_001135914, NM_199349, uc011kor.1, uc011kos.1_5end |
EntrezGene: | KCP |
HGNC: | 17585 |
UniProt: | Q6ZWJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.14e-31 | 10 |
nephron tubule epithelial cell | 2.14e-31 | 10 |
epithelial cell of nephron | 3.13e-20 | 15 |
kidney cell | 1.32e-17 | 17 |
kidney epithelial cell | 1.32e-17 | 17 |
pericyte cell | 1.82e-13 | 4 |
kidney cortical cell | 2.47e-12 | 12 |
renal cortical epithelial cell | 2.47e-12 | 12 |
brush border epithelial cell | 3.21e-10 | 3 |
kidney cortex tubule cell | 3.21e-10 | 3 |
epithelial cell of proximal tubule | 3.21e-10 | 3 |
embryonic stem cell | 3.36e-10 | 5 |
mesangial cell | 1.08e-07 | 2 |
kidney interstitial cell | 1.08e-07 | 2 |
juxtaglomerular complex cell | 1.08e-07 | 2 |
renal interstitial pericyte | 1.08e-07 | 2 |
extraglomerular mesangial cell | 1.08e-07 | 2 |
germ line cell | 1.43e-07 | 7 |
germ cell | 1.43e-07 | 7 |
central nervous system pericyte | 1.90e-07 | 2 |