FFCP PHASE1:Hg19::chr7:128582226..128582238,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6120 | |||
|TSSclassifier=strong | |||
|UniProt=A9LSF3 | |||
|association_with_transcript=-20bp_to_EU258895_5end | |||
|cluster_id=chr7:128582226..128582238,+ | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_7_at_IRF5_5end | |||
|id=chr7:128582226..128582238,+ | |||
|ontology_enrichment_celltype=CL:0002087!8.80e-43!119;CL:0002009!9.60e-42!65;CL:0002031!1.18e-41!124;CL:0002194!3.46e-41!63;CL:0000576!3.46e-41!63;CL:0000040!3.46e-41!63;CL:0000559!3.46e-41!63;CL:0000557!1.05e-38!71;CL:0000738!2.29e-37!140;CL:0000839!2.41e-37!70;CL:0002032!1.75e-34!165;CL:0000837!1.75e-34!165;CL:0002057!3.57e-34!42;CL:0000766!3.03e-33!76;CL:0000988!9.48e-33!182;CL:0000037!3.51e-32!172;CL:0000566!3.51e-32!172;CL:0000860!3.73e-31!45;CL:0000763!3.81e-26!112;CL:0000049!3.81e-26!112;CL:0000945!9.46e-10!24;CL:0000826!9.46e-10!24;CL:0002393!9.50e-09!9;CL:0002397!9.50e-09!9;CL:0000542!6.66e-08!53;CL:0000051!6.66e-08!53;CL:0000838!3.79e-07!52;CL:0000134!5.70e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.25e-24;39!CL:0000234;6.25e-24;39!CL:0000235;1.71e-19;6!CL:0000860;1.58e-15;33!CL:0002057;1.58e-15;33!CL:0000576;1.26e-12;48!CL:0000766;7.16e-10;69!CL:0000763;2.95e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.03e-30,48;CL:0000234,4.03e-30,48;CL:0002194,7.52e-24,59;CL:0000576,7.52e-24,59;CL:0000040,7.52e-24,59;CL:0000559,7.52e-24,59;CL:0002009,4.85e-23,61;CL:0000839,3.16e-21,66;CL:0000557,6.78e-21,67;CL:0002087,2.02e-19,115;CL:0000235,2.20e-19,6;CL:0000766,2.24e-19,72;CL:0002031,1.50e-18,120;CL:0000860,2.89e-18,42;CL:0002057,2.89e-18,42;CL:0000738,3.44e-16,136;CL:0002032,1.41e-15,161;CL:0000837,1.41e-15,161;CL:0000763,5.48e-15,108;CL:0000049,5.48e-15,108;CL:0000037,7.38e-15,168;CL:0000988,5.11e-14,177;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-14;42!CL:0000049;6.48e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.84e-34!80;UBERON:0001474!7.93e-31!86;UBERON:0002390!6.18e-29!102;UBERON:0003061!6.18e-29!102;UBERON:0002193!5.11e-26!112;UBERON:0002405!1.14e-24!115;UBERON:0004765!4.83e-24!101;UBERON:0001434!4.83e-24!101;UBERON:0002204!8.03e-10!167;UBERON:0003081!2.93e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.66e-18,76;UBERON:0001474,6.97e-17,82;UBERON:0004765,2.79e-15,90;UBERON:0002405,9.46e-15,93;UBERON:0002390,6.16e-14,98;UBERON:0003061,6.16e-14,98;UBERON:0001434,1.24e-13,100;UBERON:0002193,1.56e-12,108;UBERON:0002204,1.25e-07,167;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0,0,0,0,0,0,0.369754010166788,0.232401601740905,0,0,0.553995408531877,0,0.434021741431704,0.895661896959697,0,0.515151135268373,0.872389432677388,0.377875943688809,0,0.464858073811369,0,0.309706370895104,2.01384674625505,2.81776777182011,0.709446689665756,0.689491361473237,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0.320929027076094,0.639337125799041,1.31940520074686,2.59302754908121,1.70489900213078,0.580418477257168,0,0,3.26623264833766,2.08593167368081,0.868755378820466,0,0.736555271975129,0.316462387440884,0.211255286311942,0.637812899895131,1.04829322754188,0.336985893439485,0.150176892841506,0.16072558669708,0,0.39783335439818,0.730656615058536,0,1.63841583378639,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,14.7583757638122,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81284261649436,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.522109747527277,0,0,0.468528891450678,0.182454789215666,0,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.8402114799552,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0.39997479170986,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0.0999411559249289,0.357107877211315,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@IRF5 | |||
}} |
Latest revision as of 05:05, 16 September 2015
Short description: | p7@IRF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IRF5_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -20bp_to_EU258895_5end |
EntrezGene: | IRF5 |
HGNC: | 6120 |
UniProt: | A9LSF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.03e-30 | 48 |
phagocyte | 4.03e-30 | 48 |
monopoietic cell | 7.52e-24 | 59 |
monocyte | 7.52e-24 | 59 |
monoblast | 7.52e-24 | 59 |
promonocyte | 7.52e-24 | 59 |
macrophage dendritic cell progenitor | 4.85e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.16e-21 | 66 |
granulocyte monocyte progenitor cell | 6.78e-21 | 67 |
nongranular leukocyte | 2.02e-19 | 115 |
macrophage | 2.20e-19 | 6 |
myeloid leukocyte | 2.24e-19 | 72 |
hematopoietic lineage restricted progenitor cell | 1.50e-18 | 120 |
classical monocyte | 2.89e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-18 | 42 |
leukocyte | 3.44e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-15 | 161 |
myeloid cell | 5.48e-15 | 108 |
common myeloid progenitor | 5.48e-15 | 108 |
hematopoietic stem cell | 7.38e-15 | 168 |
hematopoietic cell | 5.11e-14 | 177 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.66e-18 | 76 |
bone element | 6.97e-17 | 82 |
skeletal element | 2.79e-15 | 90 |
immune system | 9.46e-15 | 93 |
hematopoietic system | 6.16e-14 | 98 |
blood island | 6.16e-14 | 98 |
skeletal system | 1.24e-13 | 100 |
hemolymphoid system | 1.56e-12 | 108 |
musculoskeletal system | 1.25e-07 | 167 |
connective tissue | 9.92e-07 | 371 |