FFCP PHASE1:Hg19::chr2:106776862..106776872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80146 | |EntrezGene=80146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17729 | |HGNC=17729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000479621_5end | |association_with_transcript=-9bp_to_ENST00000479621_5end | ||
|cluster_id=chr2:106776862..106776872,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_10_at_UXS1_5end | |description=CAGE_peak_10_at_UXS1_5end | ||
|id=chr2:106776862..106776872,- | |id=chr2:106776862..106776872,- | ||
|ontology_enrichment_celltype=CL:0000791!2.63e-34!18;CL:0000789!2.63e-34!18;CL:0002420!2.63e-34!18;CL:0002419!2.63e-34!18;CL:0000790!2.63e-34!18;CL:0000625!3.51e-29!11;CL:0000838!1.22e-28!52;CL:0000542!5.56e-28!53;CL:0000051!5.56e-28!53;CL:0000084!1.04e-23!25;CL:0000827!1.04e-23!25;CL:0002087!1.21e-14!119;CL:0000738!1.87e-12!140;CL:0000037!1.59e-11!172;CL:0000566!1.59e-11!172;CL:0002031!1.68e-11!124;CL:0000898!2.65e-11!3;CL:0000236!4.29e-11!14;CL:0000988!1.78e-10!182;CL:0002032!2.01e-10!165;CL:0000837!2.01e-10!165;CL:0000624!1.21e-09!6;CL:0000815!2.65e-08!2;CL:0000792!2.65e-08!2;CL:0002677!2.65e-08!2 | |ontology_enrichment_celltype=CL:0000791!2.63e-34!18;CL:0000789!2.63e-34!18;CL:0002420!2.63e-34!18;CL:0002419!2.63e-34!18;CL:0000790!2.63e-34!18;CL:0000625!3.51e-29!11;CL:0000838!1.22e-28!52;CL:0000542!5.56e-28!53;CL:0000051!5.56e-28!53;CL:0000084!1.04e-23!25;CL:0000827!1.04e-23!25;CL:0002087!1.21e-14!119;CL:0000738!1.87e-12!140;CL:0000037!1.59e-11!172;CL:0000566!1.59e-11!172;CL:0002031!1.68e-11!124;CL:0000898!2.65e-11!3;CL:0000236!4.29e-11!14;CL:0000988!1.78e-10!182;CL:0002032!2.01e-10!165;CL:0000837!2.01e-10!165;CL:0000624!1.21e-09!6;CL:0000815!2.65e-08!2;CL:0000792!2.65e-08!2;CL:0002677!2.65e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.25e-33;18!CL:0000789;9.25e-33;18!CL:0002419;9.25e-33;18!CL:0000084;2.40e-23;25!CL:0000625;1.10e-21;11!CL:0000815;8.70e-20;2!CL:0000792;8.70e-20;2!CL:0002677;8.70e-20;2!CL:0000542;1.16e-16;53!CL:0000624;1.03e-14;6!CL:0000898;1.60e-13;3!CL:0000236;8.02e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.23e-33,18;CL:0000789,6.23e-33,18;CL:0002420,6.23e-33,18;CL:0002419,6.23e-33,18;CL:0000790,6.23e-33,18;CL:0000838,2.66e-24,52;CL:0000542,8.27e-24,53;CL:0000051,8.27e-24,53;CL:0000084,1.81e-23,25;CL:0000827,1.81e-23,25;CL:0000625,9.48e-22,11;CL:0000815,3.33e-20,2;CL:0000792,3.33e-20,2;CL:0002677,3.33e-20,2;CL:0000624,7.75e-15,6;CL:0000898,8.44e-14,3;CL:0000236,6.69e-11,14;CL:0002087,7.30e-10,115;CL:0002031,2.24e-09,120;CL:0000738,4.65e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;9.25e-33;18!CL:0000051;1.16e-16;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.21e-11!7;UBERON:0000178!7.11e-10!15;UBERON:0000179!7.11e-10!15;UBERON:0000463!7.11e-10!15;UBERON:0002370!1.36e-07!4;UBERON:0005058!1.36e-07!4;UBERON:0009113!1.36e-07!4;UBERON:0003295!1.36e-07!4;UBERON:0005562!1.36e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p10@UXS1 | |short_description=p10@UXS1 | ||
}} | }} |
Latest revision as of 05:10, 16 September 2015
Short description: | p10@UXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_UXS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -9bp_to_ENST00000479621_5end |
EntrezGene: | UXS1 |
HGNC: | 17729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.23e-33 | 18 |
alpha-beta T cell | 6.23e-33 | 18 |
immature T cell | 6.23e-33 | 18 |
mature T cell | 6.23e-33 | 18 |
immature alpha-beta T cell | 6.23e-33 | 18 |
lymphoid lineage restricted progenitor cell | 2.66e-24 | 52 |
lymphocyte | 8.27e-24 | 53 |
common lymphoid progenitor | 8.27e-24 | 53 |
T cell | 1.81e-23 | 25 |
pro-T cell | 1.81e-23 | 25 |
CD8-positive, alpha-beta T cell | 9.48e-22 | 11 |
regulatory T cell | 3.33e-20 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.33e-20 | 2 |
naive regulatory T cell | 3.33e-20 | 2 |
CD4-positive, alpha-beta T cell | 7.75e-15 | 6 |
naive T cell | 8.44e-14 | 3 |
B cell | 6.69e-11 | 14 |
nongranular leukocyte | 7.30e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.24e-09 | 120 |
leukocyte | 4.65e-08 | 136 |