FFCP PHASE1:Hg19::chr2:108602885..108602901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60482 | |EntrezGene=60482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14025 | |HGNC=14025 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZV3 | |UniProt=Q9GZV3 | ||
|association_with_transcript=-77bp_to_ENST00000409059_5end | |association_with_transcript=-77bp_to_ENST00000409059_5end | ||
|cluster_id=chr2:108602885..108602901,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_4_at_SLC5A7_5end | |description=CAGE_peak_4_at_SLC5A7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002553!2.36e-07!1 | |ontology_enrichment_celltype=CL:0002553!2.36e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;4.27e-34;1!CL:0002188;7.25e-08;5 | |ontology_enrichment_celltype_v019=CL:0002553;4.27e-34;1!CL:0002188;7.25e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.61e-34,1;CL:0002188,7.01e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SLC5A7 | |short_description=p4@SLC5A7 | ||
}} | }} |
Latest revision as of 05:44, 16 September 2015
Short description: | p4@SLC5A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC5A7_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -77bp_to_ENST00000409059_5end |
EntrezGene: | SLC5A7 |
HGNC: | 14025 |
UniProt: | Q9GZV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.61e-34 | 1 |
glomerular endothelial cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
locus ceruleus | 9.07e-18 | 2 |
brainstem nucleus | 9.07e-18 | 2 |
hindbrain nucleus | 9.07e-18 | 2 |
pons | 2.59e-12 | 3 |
duodenum | 3.24e-12 | 2 |
small intestine | 7.49e-08 | 4 |
brainstem | 8.48e-07 | 6 |