FFCP PHASE1:Hg19::chr4:155484103..155484147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2244 | |EntrezGene=2244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3662 | |HGNC=3662 | ||
|TSSclassifier=strong | |||
|UniProt=P02675 | |UniProt=P02675 | ||
|association_with_transcript=0bp_to_ENST00000302068,NM_001184741,NM_005141,uc003ioa.3,uc003iob.3,uc003ioc.3,uc010ipu.1,uc010ipv.2,uc010ipw.2_5end | |association_with_transcript=0bp_to_ENST00000302068,NM_001184741,NM_005141,uc003ioa.3,uc003iob.3,uc003ioc.3,uc010ipu.1,uc010ipv.2,uc010ipw.2_5end | ||
|cluster_id=chr4:155484103..155484147,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_FGB_5end | |description=CAGE_peak_2_at_FGB_5end | ||
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|ontology_enrichment_celltype=CL:0000181!4.50e-25!12;CL:0000417!4.50e-25!12;CL:0000668!4.50e-25!12;CL:0000414!4.50e-25!12;CL:0000412!4.50e-25!12;CL:0000182!4.50e-25!12;CL:1000497!4.37e-12!18;CL:0002518!4.37e-12!18;CL:1000507!1.61e-10!12;CL:1000494!1.61e-10!12;CL:1000449!1.80e-10!16;CL:0000066!2.14e-07!254;CL:0002322!3.40e-07!5;CL:0000223!5.38e-07!59;CL:0002681!7.58e-07!13;CL:0002584!7.58e-07!13 | |ontology_enrichment_celltype=CL:0000181!4.50e-25!12;CL:0000417!4.50e-25!12;CL:0000668!4.50e-25!12;CL:0000414!4.50e-25!12;CL:0000412!4.50e-25!12;CL:0000182!4.50e-25!12;CL:1000497!4.37e-12!18;CL:0002518!4.37e-12!18;CL:1000507!1.61e-10!12;CL:1000494!1.61e-10!12;CL:1000449!1.80e-10!16;CL:0000066!2.14e-07!254;CL:0002322!3.40e-07!5;CL:0000223!5.38e-07!59;CL:0002681!7.58e-07!13;CL:0002584!7.58e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.20e-32;12!CL:1000497;1.89e-11;17!CL:0002518;1.89e-11;17!CL:0002563;5.30e-09;4!CL:1000449;1.59e-08;15!CL:1000507;1.52e-07;10!CL:1000494;1.52e-07;10 | |ontology_enrichment_celltype_v019=CL:0000182;2.20e-32;12!CL:1000497;1.89e-11;17!CL:0002518;1.89e-11;17!CL:0002563;5.30e-09;4!CL:1000449;1.59e-08;15!CL:1000507;1.52e-07;10!CL:1000494;1.52e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.20e-32,12;CL:0000223,2.30e-12,58;CL:1000497,1.85e-11,17;CL:0002518,1.85e-11,17;CL:0002563,5.30e-09,4;CL:1000449,1.56e-08,15;CL:1000507,1.49e-07,10;CL:1000494,1.49e-07,10;CL:0000066,5.49e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.85e-26;11!UBERON:0003104;1.53e-24;31!UBERON:0009497;6.60e-22;13!UBERON:0001041;2.35e-12;30!CL:0000223;2.68e-08;58!UBERON:0003918;1.09e-07;10!UBERON:0007687;1.09e-07;10 | |ontology_enrichment_development_v019=UBERON:0004161;5.85e-26;11!UBERON:0003104;1.53e-24;31!UBERON:0009497;6.60e-22;13!UBERON:0001041;2.35e-12;30!CL:0000223;2.68e-08;58!UBERON:0003918;1.09e-07;10!UBERON:0007687;1.09e-07;10 | ||
|ontology_enrichment_disease=DOID:4468!2.25e-08!2 | |ontology_enrichment_disease=DOID:4468!2.25e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!5.54e-34!55;UBERON:0005173!5.54e-34!55;UBERON:0002417!5.04e-30!61;UBERON:0000916!5.04e-30!61;UBERON:0002107!2.90e-27!19;UBERON:0006925!2.90e-27!19;UBERON:0008836!2.90e-27!19;UBERON:0005057!7.25e-26!26;UBERON:0008835!3.67e-23!22;UBERON:0003894!3.67e-23!22;UBERON:0009854!4.94e-22!23;UBERON:0005177!1.02e-20!107;UBERON:0007499!4.79e-20!25;UBERON:0009497!4.79e-20!25;UBERON:0000015!4.79e-20!25;UBERON:0002423!4.79e-20!25;UBERON:0006235!4.79e-20!25;UBERON:0004161!4.79e-20!25;UBERON:0009856!3.62e-19!26;UBERON:0003929!1.51e-18!54;UBERON:0009569!3.32e-16!113;UBERON:0002368!8.63e-16!35;UBERON:0002365!1.25e-15!31;UBERON:0002330!1.25e-15!31;UBERON:0002113!1.73e-14!27;UBERON:0003918!1.73e-14!27;UBERON:0005095!1.73e-14!27;UBERON:0007687!1.73e-14!27;UBERON:0005911!1.34e-13!82;UBERON:0000949!1.42e-13!45;UBERON:0006554!2.88e-13!44;UBERON:0001008!6.69e-13!45;UBERON:0002530!1.04e-12!59;UBERON:0006555!1.30e-12!17;UBERON:0005103!1.30e-12!17;UBERON:0000083!1.30e-12!17;UBERON:0009201!1.30e-12!17;UBERON:0004819!1.30e-12!17;UBERON:0006553!1.30e-12!17;UBERON:0003074!1.30e-12!17;UBERON:0003060!1.30e-12!17;UBERON:0003887!1.50e-12!21;UBERON:0000466!1.95e-12!126;UBERON:0000489!7.28e-12!32;UBERON:0000080!7.71e-12!18;UBERON:0002120!7.71e-12!18;UBERON:0004875!7.71e-12!18;UBERON:0005721!7.71e-12!18;UBERON:0005754!7.71e-12!18;UBERON:0007297!7.71e-12!18;UBERON:0005256!2.98e-11!143;UBERON:0002100!6.69e-11!216;UBERON:0003104!7.28e-11!238;UBERON:0009142!7.28e-11!238;UBERON:0004921!8.32e-11!129;UBERON:0004185!8.32e-11!129;UBERON:0004876!1.60e-10!20;UBERON:0009773!1.61e-10!12;UBERON:0001231!1.61e-10!12;UBERON:0004810!1.61e-10!12;UBERON:0004211!1.80e-10!16;UBERON:0001285!1.80e-10!16;UBERON:0007684!1.80e-10!16;UBERON:0003220!1.80e-10!16;UBERON:0004208!1.80e-10!16;UBERON:0003064!1.10e-09!37;UBERON:0003914!5.48e-09!118;UBERON:0000077!1.28e-08!130;UBERON:0001007!4.46e-08!155;UBERON:0001555!4.46e-08!155;UBERON:0007026!4.46e-08!155;UBERON:0000058!8.53e-08!26;UBERON:0004119!9.25e-08!169;UBERON:0000925!9.25e-08!169;UBERON:0006595!9.25e-08!169;UBERON:0000481!2.89e-07!347;UBERON:0000353!3.27e-07!17;UBERON:0001041!3.40e-07!98;UBERON:0003586!4.12e-07!5;UBERON:0001225!7.58e-07!13;UBERON:0008987!7.58e-07!13 | |ontology_enrichment_uberon=UBERON:0005172!5.54e-34!55;UBERON:0005173!5.54e-34!55;UBERON:0002417!5.04e-30!61;UBERON:0000916!5.04e-30!61;UBERON:0002107!2.90e-27!19;UBERON:0006925!2.90e-27!19;UBERON:0008836!2.90e-27!19;UBERON:0005057!7.25e-26!26;UBERON:0008835!3.67e-23!22;UBERON:0003894!3.67e-23!22;UBERON:0009854!4.94e-22!23;UBERON:0005177!1.02e-20!107;UBERON:0007499!4.79e-20!25;UBERON:0009497!4.79e-20!25;UBERON:0000015!4.79e-20!25;UBERON:0002423!4.79e-20!25;UBERON:0006235!4.79e-20!25;UBERON:0004161!4.79e-20!25;UBERON:0009856!3.62e-19!26;UBERON:0003929!1.51e-18!54;UBERON:0009569!3.32e-16!113;UBERON:0002368!8.63e-16!35;UBERON:0002365!1.25e-15!31;UBERON:0002330!1.25e-15!31;UBERON:0002113!1.73e-14!27;UBERON:0003918!1.73e-14!27;UBERON:0005095!1.73e-14!27;UBERON:0007687!1.73e-14!27;UBERON:0005911!1.34e-13!82;UBERON:0000949!1.42e-13!45;UBERON:0006554!2.88e-13!44;UBERON:0001008!6.69e-13!45;UBERON:0002530!1.04e-12!59;UBERON:0006555!1.30e-12!17;UBERON:0005103!1.30e-12!17;UBERON:0000083!1.30e-12!17;UBERON:0009201!1.30e-12!17;UBERON:0004819!1.30e-12!17;UBERON:0006553!1.30e-12!17;UBERON:0003074!1.30e-12!17;UBERON:0003060!1.30e-12!17;UBERON:0003887!1.50e-12!21;UBERON:0000466!1.95e-12!126;UBERON:0000489!7.28e-12!32;UBERON:0000080!7.71e-12!18;UBERON:0002120!7.71e-12!18;UBERON:0004875!7.71e-12!18;UBERON:0005721!7.71e-12!18;UBERON:0005754!7.71e-12!18;UBERON:0007297!7.71e-12!18;UBERON:0005256!2.98e-11!143;UBERON:0002100!6.69e-11!216;UBERON:0003104!7.28e-11!238;UBERON:0009142!7.28e-11!238;UBERON:0004921!8.32e-11!129;UBERON:0004185!8.32e-11!129;UBERON:0004876!1.60e-10!20;UBERON:0009773!1.61e-10!12;UBERON:0001231!1.61e-10!12;UBERON:0004810!1.61e-10!12;UBERON:0004211!1.80e-10!16;UBERON:0001285!1.80e-10!16;UBERON:0007684!1.80e-10!16;UBERON:0003220!1.80e-10!16;UBERON:0004208!1.80e-10!16;UBERON:0003064!1.10e-09!37;UBERON:0003914!5.48e-09!118;UBERON:0000077!1.28e-08!130;UBERON:0001007!4.46e-08!155;UBERON:0001555!4.46e-08!155;UBERON:0007026!4.46e-08!155;UBERON:0000058!8.53e-08!26;UBERON:0004119!9.25e-08!169;UBERON:0000925!9.25e-08!169;UBERON:0006595!9.25e-08!169;UBERON:0000481!2.89e-07!347;UBERON:0000353!3.27e-07!17;UBERON:0001041!3.40e-07!98;UBERON:0003586!4.12e-07!5;UBERON:0001225!7.58e-07!13;UBERON:0008987!7.58e-07!13 | ||
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|short_description=p2@FGB | |short_description=p2@FGB | ||
}} | }} |
Latest revision as of 05:58, 16 September 2015
Short description: | p2@FGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000302068, NM_001184741, NM_005141, uc003ioa.3, uc003iob.3, uc003ioc.3, uc010ipu.1, uc010ipv.2, uc010ipw.2_5end |
EntrezGene: | FGB |
HGNC: | 3662 |
UniProt: | P02675 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.20e-32 | 12 |
endodermal cell | 2.30e-12 | 58 |
kidney cell | 1.85e-11 | 17 |
kidney epithelial cell | 1.85e-11 | 17 |
intestinal epithelial cell | 5.30e-09 | 4 |
epithelial cell of nephron | 1.56e-08 | 15 |
kidney tubule cell | 1.49e-07 | 10 |
nephron tubule epithelial cell | 1.49e-07 | 10 |
epithelial cell | 5.49e-07 | 253 |