FFCP PHASE1:Hg19::chr8:128902476..128902500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5820 | |EntrezGene=5820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=9709 | |HGNC=9709 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-334bp_to_uc003ysl.2_5end | |||
|cluster_id=chr8:128902476..128902500,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_14_at_PVT1_5end | |||
|id=chr8:128902476..128902500,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.01e-15!5;CL:0000457!1.01e-15!5;CL:0002191!1.01e-15!5;CL:0000097!1.01e-15!5;CL:0000831!1.01e-15!5;CL:0002028!1.01e-15!5;CL:0000163!1.67e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.14e-90;5!CL:0000163;2.04e-50;9!CL:0000151;9.17e-12;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.11e-90,5;CL:0002028,3.11e-90,5;CL:0000163,2.50e-50,9;CL:0000151,9.69e-13,36;CL:0000763,3.77e-10,108;CL:0000049,3.77e-10,108;CL:0002032,1.93e-08,161;CL:0000837,1.93e-08,161;CL:0000037,4.61e-08,168;CL:0000988,1.28e-07,177;CL:0000839,7.34e-07,66;CL:0000557,9.27e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.41e-08!31;DOID:1036!3.37e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.25e-19;1!DOID:0070004;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.71e-19,1;DOID:0070004,2.71e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.36e-08,76;UBERON:0001474,9.82e-08,82;UBERON:0004765,4.92e-07,90;UBERON:0002405,8.41e-07,93 | |||
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| ||
|short_description=p14@PVT1 | |||
}} | }} |
Latest revision as of 07:14, 16 September 2015
Short description: | p14@PVT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PVT1_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -334bp_to_uc003ysl.2_5end |
EntrezGene: | PVT1 |
HGNC: | 9709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.11e-90 | 5 |
basophil mast progenitor cell | 3.11e-90 | 5 |
endocrine cell | 2.50e-50 | 9 |
secretory cell | 9.69e-13 | 36 |
myeloid cell | 3.77e-10 | 108 |
common myeloid progenitor | 3.77e-10 | 108 |
hematopoietic oligopotent progenitor cell | 1.93e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-08 | 161 |
hematopoietic stem cell | 4.61e-08 | 168 |
hematopoietic cell | 1.28e-07 | 177 |
myeloid lineage restricted progenitor cell | 7.34e-07 | 66 |
granulocyte monocyte progenitor cell | 9.27e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.36e-08 | 76 |
bone element | 9.82e-08 | 82 |
skeletal element | 4.92e-07 | 90 |
immune system | 8.41e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.71e-19 | 1 |
myeloma | 2.71e-19 | 1 |