FFCP PHASE1:Hg19::chr2:241375264..241375280,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:241375264..241375280,+
|short_description=p7@GPC1
|description=CAGE_peak_7_at_GPC1_5end
|association_with_transcript=149bp_to_NM_002081,uc002vyw.3_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2817 | |EntrezGene=2817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |HGNC=4449 | ||
|TSSclassifier=strong | |||
|UniProt=P35052 | |UniProt=P35052 | ||
|association_with_transcript=149bp_to_NM_002081,uc002vyw.3_5end | |||
|cluster_id=chr2:241375264..241375280,+ | |||
|coexpression_cluster_id=C1899 | |||
|description=CAGE_peak_7_at_GPC1_5end | |||
|id=chr2:241375264..241375280,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.45e-26!180;CL:0000057!1.34e-17!75;CL:0000220!1.21e-09!246;CL:0002321!3.88e-09!248;CL:0000680!5.44e-09!57;CL:0000056!5.44e-09!57;CL:0000355!5.44e-09!57;CL:0000183!7.24e-09!59;CL:0000187!5.61e-08!54;CL:0000136!9.52e-08!15;CL:0000192!1.26e-07!42;CL:0000514!1.26e-07!42;CL:0000393!5.12e-07!60;CL:0000211!5.12e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.09e-07;73!CL:0000136;2.62e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-18,76;CL:0000136,9.34e-09,15;CL:0000680,2.54e-08,58;CL:0000056,2.54e-08,58;CL:0000355,2.54e-08,58;CL:0000187,3.03e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.89e-20!365;UBERON:0000481!2.81e-16!347;UBERON:0000914!2.51e-12!83;UBERON:0002329!2.51e-12!83;UBERON:0003077!2.51e-12!83;UBERON:0003059!2.51e-12!83;UBERON:0007282!2.51e-12!83;UBERON:0009618!2.51e-12!83;UBERON:0007285!2.51e-12!83;UBERON:0003102!1.44e-11!95;UBERON:0002100!4.64e-11!216;UBERON:0003104!4.74e-11!238;UBERON:0009142!4.74e-11!238;UBERON:0000468!9.55e-11!659;UBERON:0000486!1.38e-10!82;UBERON:0005256!1.68e-10!143;UBERON:0000119!2.49e-10!312;UBERON:0004290!4.43e-10!70;UBERON:0000483!7.08e-10!309;UBERON:0001134!7.54e-10!61;UBERON:0002036!7.54e-10!61;UBERON:0003082!7.54e-10!61;UBERON:0002385!1.42e-09!63;UBERON:0001015!1.42e-09!63;UBERON:0000383!1.42e-09!63;UBERON:0000467!4.63e-09!625;UBERON:0000480!7.48e-09!626;UBERON:0000477!1.24e-08!286;UBERON:0007100!2.26e-08!27;UBERON:0000064!8.02e-08!219;UBERON:0001013!7.27e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.47e-08;25!UBERON:0001013;3.07e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.52e-10,99;UBERON:0000486,1.93e-09,83;UBERON:0002329,2.82e-09,71;UBERON:0003059,2.82e-09,71;UBERON:0007282,2.82e-09,71;UBERON:0004290,2.82e-09,71;UBERON:0009618,2.82e-09,71;UBERON:0007100,3.02e-09,27;UBERON:0001134,5.66e-09,62;UBERON:0002036,5.66e-09,62;UBERON:0003082,5.66e-09,62;UBERON:0007524,5.67e-09,73;UBERON:0003077,6.50e-09,72;UBERON:0007285,6.50e-09,72;UBERON:0002385,1.34e-08,64;UBERON:0001015,1.34e-08,64;UBERON:0000383,1.34e-08,64;UBERON:0007503,3.53e-08,78;UBERON:0001013,2.59e-07,14;UBERON:0000948,2.91e-07,24;UBERON:0005498,2.91e-07,24;UBERON:0004140,2.91e-07,24;UBERON:0009881,2.91e-07,24;UBERON:0004141,2.91e-07,24;UBERON:0003084,2.91e-07,24;UBERON:0007005,2.91e-07,24;UBERON:0004139,2.91e-07,24;UBERON:0004291,2.91e-07,24 | |||
|phase1_expression=3.27021082687002,2.99740733447376,2.67813367782345,3.00219895059391,5.81049422755474,2.61701557230111,7.59899634504932,6.94891860769514,4.44015567939725,2.21160542851358,1.39560233594486,2.18441372130172,2.11013582582763,2.10402800032079,4.30816588446291,4.03395087871065,4.82155622419182,2.92124036154949,2.92759679274304,2.58554221961255,2.04000691244253,2.5076377718247,1.71741592278634,1.50561867580173,2.51085279189606,0,0,0,0,0,0,1.83884244895785,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.42938867502708,2.89151321907653,2.00535164254356,4.63508860674636,0,1.94653948121054,2.45790524626576,1.33037638477538,1.40535657109002,0.916853528483988,3.27865759463288,4.07862887062872,0,0.174129737299267,0,0,0,0,1.19257444420023,0,0.694281003215189,1.69592382577203,0.838998872419812,0,0.417989933073621,0.516833518338658,0.71153252537342,0.66944122552934,1.20848795132744,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,2.61656431285521,3.47880366186723,2.65924074495618,1.85372853138506,2.86836620748814,2.83734705758686,3.36406560085384,2.1349799145941,1.97334038733728,1.8672662123986,2.15537075311501,2.45192854670188,2.11900398702904,1.72852777344,1.87457145467037,2.80944069147288,1.1409436430889,2.98897361103602,1.17434498643765,1.13311061057692,0.561803226808994,2.44985005505872,0.859840221182376,2.27316718586684,4.75201142912821,4.94533858557114,7.28129089550421,12.9351265526923,1.34668891163253,1.37630371859161,0.831192346452549,6.58466431321257,3.37136575378922,4.5071417671979,3.51639767796065,4.66413052791041,2.56268866582281,2.54318281391474,3.90118424909723,1.95799805553034,3.86460810068444,6.14185625894246,3.20675031258406,4.09235421677034,2.01947019395292,2.39329736469978,1.45481451136931,7.10019185033229,5.13835700960965,2.37384829234683,2.12586938479627,1.63647672354501,3.15485054927904,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,1.56449532329816,4.5026865673502,0,1.85747171212792,5.77503585335668,1.30137480043828,1.85443159085912,1.44606617930089,1.98529150918309,3.92182999366331,1.42362371466658,1.8876383142423,1.96221465125346,1.15424147083917,0,2.80483547606892,1.6462960453256,7.3504355692771,3.80265104465493,1.96565443335525,0,0,0.491953754172454,1.20097467208968,2.74375713521564,1.1240175325762,1.00528972411631,1.11106134190236,0.977424915930974,2.07986957055916,2.88662684050547,1.62302566965108,0.352226082707465,0,0,0,1.58040879591855,0,0,0,0,1.87467667973554,3.19166043577833,1.84307626415102,2.7763142037883,1.45316969256981,4.60059214998253,0,0,0,0.144119953416961,0.12624243342638,1.33345578013555,3.4378958300245,0,1.71072446022705,0.822619941626588,1.20137223137567,0.285826432630578,1.79409734952577,2.1798003441664,2.56684000373325,1.16344544182,35.7656445851882,2.535908257668,4.78688609852767,6.24044621468197,5.14414748524284,4.25547396069835,3.19706614819319,3.28849385413739,6.51145926469732,2.46972101034231,5.21177894869976,2.48774364119782,1.58390374586686,0.904318131178758,3.48613383440118,1.09970290300263,0,0,0,1.67737398844108,2.29723871668228,0,4.1986578933598,2.87666851570537,3.9393411912777,0,0,0,0,2.28685161800217,0,0.773288812777695,0.502548796003046,3.18969375826582,0,0,0,2.20844685094452,3.50119364741774,0.813795071099207,3.11956292296211,3.39015078714607,5.04647728108591,2.81139395982512,1.50473049863859,6.82222512167955,2.0694614258501,2.65690239414175,3.13427586520895,2.69339204851057,5.48243240895674,7.89229874764969,0,0,0,2.42502057157008,8.32177197552485,3.0239029332968,6.20269519546942,1.84154367945675,3.92924132206303,6.66323576129645,5.11707249066703,5.14732547659544,19.2943486378488,0.771048469013278,3.72879623157567,2.21743321237285,2.07701771673448,2.20799719073923,0.241718899183244,4.21063587636898,0.920809889358963,4.13332013392584,2.00300284807389,6.29397191805236,1.35359883872224,0.924184045252977,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0.431831832204279,0,1.35473218771926,2.00675909541941,0.509752546090077,0,0.895499018888713,0,0,1.28225062558195,3.60816110269676,0,1.23649213977267,2.01452822600355,0.990113999047056,1.72279661398852,0.650060246036521,12.8547143875328,1.45006077438183,1.84858340537573,1.99554777143968,1.37836572484531,1.82614416276065,1.74020032697074,2.04543905798642,3.82837753280971,2.31398881505369,4.03599141466723,1.27612712494584,2.32662895967765,2.78907329578371,6.61105928344344,1.3940745403212,2.15623506123262,1.59691809095107,1.73986598415015,0.55597265731176,0.715624433709956,2.232950216158,0.632758849437452,1.14378116354295,5.11795582622668,2.99557291623744,2.86382923133343,0,0.719489830333259,2.19629623788844,2.12062324222236,4.04364963146632,6.34041284692033,0.842516912477962,3.413436173627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|phase1_expression=3.27021082687002,2.99740733447376,2.67813367782345,3.00219895059391,5.81049422755474,2.61701557230111,7.59899634504932,6.94891860769514,4.44015567939725,2.21160542851358,1.39560233594486,2.18441372130172,2.11013582582763,2.10402800032079,4.30816588446291,4.03395087871065,4.82155622419182,2.92124036154949,2.92759679274304,2.58554221961255,2.04000691244253,2.5076377718247,1.71741592278634,1.50561867580173,2.51085279189606,0,0,0,0,0,0,1.83884244895785,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.42938867502708,2.89151321907653,2.00535164254356,4.63508860674636,0,1.94653948121054,2.45790524626576,1.33037638477538,1.40535657109002,0.916853528483988,3.27865759463288,4.07862887062872,0,0.174129737299267,0,0,0,0,1.19257444420023,0,0.694281003215189,1.69592382577203,0.838998872419812,0,0.417989933073621,0.516833518338658,0.71153252537342,0.66944122552934,1.20848795132744,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,2.61656431285521,3.47880366186723,2.65924074495618,1.85372853138506,2.86836620748814,2.83734705758686,3.36406560085384,2.1349799145941,1.97334038733728,1.8672662123986,2.15537075311501,2.45192854670188,2.11900398702904,1.72852777344,1.87457145467037,2.80944069147288,1.1409436430889,2.98897361103602,1.17434498643765,1.13311061057692,0.561803226808994,2.44985005505872,0.859840221182376,2.27316718586684,4.75201142912821,4.94533858557114,7.28129089550421,12.9351265526923,1.34668891163253,1.37630371859161,0.831192346452549,6.58466431321257,3.37136575378922,4.5071417671979,3.51639767796065,4.66413052791041,2.56268866582281,2.54318281391474,3.90118424909723,1.95799805553034,3.86460810068444,6.14185625894246,3.20675031258406,4.09235421677034,2.01947019395292,2.39329736469978,1.45481451136931,7.10019185033229,5.13835700960965,2.37384829234683,2.12586938479627,1.63647672354501,3.15485054927904,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,1.56449532329816,4.5026865673502,0,1.85747171212792,5.77503585335668,1.30137480043828,1.85443159085912,1.44606617930089,1.98529150918309,3.92182999366331,1.42362371466658,1.8876383142423,1.96221465125346,1.15424147083917,0,2.80483547606892,1.6462960453256,7.3504355692771,3.80265104465493,1.96565443335525,0,0,0.491953754172454,1.20097467208968,2.74375713521564,1.1240175325762,1.00528972411631,1.11106134190236,0.977424915930974,2.07986957055916,2.88662684050547,1.62302566965108,0.352226082707465,0,0,0,1.58040879591855,0,0,0,0,1.87467667973554,3.19166043577833,1.84307626415102,2.7763142037883,1.45316969256981,4.60059214998253,0,0,0,0.144119953416961,0.12624243342638,1.33345578013555,3.4378958300245,0,1.71072446022705,0.822619941626588,1.20137223137567,0.285826432630578,1.79409734952577,2.1798003441664,2.56684000373325,1.16344544182,35.7656445851882,2.535908257668,4.78688609852767,6.24044621468197,5.14414748524284,4.25547396069835,3.19706614819319,3.28849385413739,6.51145926469732,2.46972101034231,5.21177894869976,2.48774364119782,1.58390374586686,0.904318131178758,3.48613383440118,1.09970290300263,0,0,0,1.67737398844108,2.29723871668228,0,4.1986578933598,2.87666851570537,3.9393411912777,0,0,0,0,2.28685161800217,0,0.773288812777695,0.502548796003046,3.18969375826582,0,0,0,2.20844685094452,3.50119364741774,0.813795071099207,3.11956292296211,3.39015078714607,5.04647728108591,2.81139395982512,1.50473049863859,6.82222512167955,2.0694614258501,2.65690239414175,3.13427586520895,2.69339204851057,5.48243240895674,7.89229874764969,0,0,0,2.42502057157008,8.32177197552485,3.0239029332968,6.20269519546942,1.84154367945675,3.92924132206303,6.66323576129645,5.11707249066703,5.14732547659544,19.2943486378488,0.771048469013278,3.72879623157567,2.21743321237285,2.07701771673448,2.20799719073923,0.241718899183244,4.21063587636898,0.920809889358963,4.13332013392584,2.00300284807389,6.29397191805236,1.35359883872224,0.924184045252977,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0.431831832204279,0,1.35473218771926,2.00675909541941,0.509752546090077,0,0.895499018888713,0,0,1.28225062558195,3.60816110269676,0,1.23649213977267,2.01452822600355,0.990113999047056,1.72279661398852,0.650060246036521,12.8547143875328,1.45006077438183,1.84858340537573,1.99554777143968,1.37836572484531,1.82614416276065,1.74020032697074,2.04543905798642,3.82837753280971,2.31398881505369,4.03599141466723,1.27612712494584,2.32662895967765,2.78907329578371,6.61105928344344,1.3940745403212,2.15623506123262,1.59691809095107,1.73986598415015,0.55597265731176,0.715624433709956,2.232950216158,0.632758849437452,1.14378116354295,5.11795582622668,2.99557291623744,2.86382923133343,0,0.719489830333259,2.19629623788844,2.12062324222236,4.04364963146632,6.34041284692033,0.842516912477962,3.413436173627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| ||
|short_description=p7@GPC1 | |||
}} | }} |
Latest revision as of 07:26, 16 September 2015
Short description: | p7@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GPC1_5end |
Coexpression cluster: | C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes |
Association with transcript: | 149bp_to_NM_002081, uc002vyw.3_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-18 | 76 |
fat cell | 9.34e-09 | 15 |
muscle precursor cell | 2.54e-08 | 58 |
myoblast | 2.54e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.54e-08 | 58 |
muscle cell | 3.03e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.52e-10 | 99 |
multilaminar epithelium | 1.93e-09 | 83 |
somite | 2.82e-09 | 71 |
presomitic mesoderm | 2.82e-09 | 71 |
presumptive segmental plate | 2.82e-09 | 71 |
dermomyotome | 2.82e-09 | 71 |
trunk paraxial mesoderm | 2.82e-09 | 71 |
primary circulatory organ | 3.02e-09 | 27 |
skeletal muscle tissue | 5.66e-09 | 62 |
striated muscle tissue | 5.66e-09 | 62 |
myotome | 5.66e-09 | 62 |
dense mesenchyme tissue | 5.67e-09 | 73 |
paraxial mesoderm | 6.50e-09 | 72 |
presumptive paraxial mesoderm | 6.50e-09 | 72 |
muscle tissue | 1.34e-08 | 64 |
musculature | 1.34e-08 | 64 |
musculature of body | 1.34e-08 | 64 |
epithelial vesicle | 3.53e-08 | 78 |
adipose tissue | 2.59e-07 | 14 |
heart | 2.91e-07 | 24 |
primitive heart tube | 2.91e-07 | 24 |
primary heart field | 2.91e-07 | 24 |
anterior lateral plate mesoderm | 2.91e-07 | 24 |
heart tube | 2.91e-07 | 24 |
heart primordium | 2.91e-07 | 24 |
cardiac mesoderm | 2.91e-07 | 24 |
cardiogenic plate | 2.91e-07 | 24 |
heart rudiment | 2.91e-07 | 24 |