FFCP PHASE1:Hg19::chr9:136501478..136501491,+: Difference between revisions
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|id=chr9:136501478..136501491,+
|short_description=p1@DBH
|description=CAGE_peak_1_at_DBH_5end
|association_with_transcript=0bp_to_ENST00000371880,ENST00000393056,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1621 | |EntrezGene=1621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2689 | |HGNC=2689 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T382,P09172 | |UniProt=Q5T382,P09172 | ||
|association_with_transcript=0bp_to_ENST00000371880,ENST00000393056,NM_000787,uc004cel.2_5end | |||
|cluster_id=chr9:136501478..136501491,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_1_at_DBH_5end | |||
|id=chr9:136501478..136501491,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.23e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.62e-12;1 | |||
|ontology_enrichment_disease=DOID:169!2.75e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;3.57e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.64e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.97e-22!8;UBERON:0007023!4.71e-21!115;UBERON:0000988!3.82e-16!3;UBERON:0003076!9.21e-16!15;UBERON:0003057!9.21e-16!15;UBERON:0001896!9.95e-16!3;UBERON:0005290!9.95e-16!3;UBERON:0010096!9.95e-16!3;UBERON:0004733!9.28e-15!12;UBERON:0002028!9.28e-15!12;UBERON:0007277!9.28e-15!12;UBERON:0004732!1.41e-13!13;UBERON:0002148!2.46e-11!2;UBERON:0009662!2.46e-11!2;UBERON:0000013!7.32e-10!5;UBERON:0002410!7.32e-10!5;UBERON:0006331!7.90e-08!3;UBERON:0006947!9.99e-08!3;UBERON:0004054!9.99e-08!3;UBERON:0003978!3.14e-07!3;UBERON:0009751!3.14e-07!3;UBERON:0000946!3.14e-07!3;UBERON:0002523!3.14e-07!3;UBERON:0005983!3.14e-07!3;UBERON:0002165!3.14e-07!3;UBERON:0002062!3.14e-07!3;UBERON:0007280!3.14e-07!3;UBERON:0000073!3.96e-07!94;UBERON:0001016!3.96e-07!94;UBERON:0003075!6.85e-07!86;UBERON:0007284!6.85e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.99e-28;6!UBERON:0000988;3.11e-15;3!UBERON:0001896;8.67e-15;3!UBERON:0005290;8.67e-15;3!UBERON:0004733;2.77e-14;12!UBERON:0002028;2.77e-14;12!UBERON:0004732;3.33e-13;13!UBERON:0000998;5.62e-12;1!UBERON:0006868;5.62e-12;1!UBERON:0005795;7.36e-12;1!UBERON:0002336;1.07e-11;1!UBERON:0011215;1.07e-11;1!UBERON:0001018;1.07e-11;1!UBERON:0002473;1.07e-11;1!UBERON:0005340;1.07e-11;1!UBERON:0003544;1.07e-11;1!UBERON:0005970;1.07e-11;1!UBERON:0002316;1.07e-11;1!UBERON:0001020;1.07e-11;1!UBERON:0002437;1.07e-11;1!UBERON:0000013;1.23e-09;5!UBERON:0002410;1.23e-09;5!UBERON:0002148;9.43e-07;2!UBERON:0006331;9.43e-07;2!UBERON:0009662;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.89e-28,6;UBERON:0003076,2.12e-17,15;UBERON:0003057,2.12e-17,15;UBERON:0000988,3.22e-15,3;UBERON:0001896,8.08e-15,3;UBERON:0005290,8.08e-15,3;UBERON:0010096,8.08e-15,3;UBERON:0004733,2.72e-14,12;UBERON:0002028,2.72e-14,12;UBERON:0007277,2.72e-14,12;UBERON:0004732,3.27e-13,13;UBERON:0000998,5.62e-12,1;UBERON:0006868,5.62e-12,1;UBERON:0002336,1.32e-11,1;UBERON:0011215,1.32e-11,1;UBERON:0001018,1.32e-11,1;UBERON:0002473,1.32e-11,1;UBERON:0005340,1.32e-11,1;UBERON:0003544,1.32e-11,1;UBERON:0005970,1.32e-11,1;UBERON:0002316,1.32e-11,1;UBERON:0001020,1.32e-11,1;UBERON:0002437,1.32e-11,1;UBERON:0000013,1.25e-09,5;UBERON:0002410,1.25e-09,5;UBERON:0007023,8.36e-08,114;UBERON:0002148,9.44e-07,2;UBERON:0006331,9.44e-07,2;UBERON:0009662,9.44e-07,2 | |||
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|short_description=p1@DBH | |||
}} | }} |
Latest revision as of 07:37, 16 September 2015
Short description: | p1@DBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DBH_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_ENST00000371880, ENST00000393056, NM_000787, uc004cel.2_5end |
EntrezGene: | DBH |
HGNC: | 2689 |
UniProt: | Q5T382P09172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 2.89e-28 | 6 |
posterior neural tube | 2.12e-17 | 15 |
chordal neural plate | 2.12e-17 | 15 |
pons | 3.22e-15 | 3 |
medulla oblongata | 8.08e-15 | 3 |
myelencephalon | 8.08e-15 | 3 |
future myelencephalon | 8.08e-15 | 3 |
segmental subdivision of hindbrain | 2.72e-14 | 12 |
hindbrain | 2.72e-14 | 12 |
presumptive hindbrain | 2.72e-14 | 12 |
segmental subdivision of nervous system | 3.27e-13 | 13 |
seminal vesicle | 5.62e-12 | 1 |
seminal fluid secreting gland | 5.62e-12 | 1 |
corpus callosum | 1.32e-11 | 1 |
central nervous system cell part cluster | 1.32e-11 | 1 |
axon tract | 1.32e-11 | 1 |
intercerebral commissure | 1.32e-11 | 1 |
dorsal telencephalic commissure | 1.32e-11 | 1 |
brain white matter | 1.32e-11 | 1 |
brain commissure | 1.32e-11 | 1 |
white matter | 1.32e-11 | 1 |
nervous system commissure | 1.32e-11 | 1 |
cerebral hemisphere white matter | 1.32e-11 | 1 |
sympathetic nervous system | 1.25e-09 | 5 |
autonomic nervous system | 1.25e-09 | 5 |
adult organism | 8.36e-08 | 114 |
locus ceruleus | 9.44e-07 | 2 |
brainstem nucleus | 9.44e-07 | 2 |
hindbrain nucleus | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.64e-08 | 6 |