FFCP PHASE1:Hg19::chr2:113342163..113342210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84269 | |EntrezGene=84269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17840 | |HGNC=17840 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8C4 | |UniProt=Q8N8C4 | ||
|association_with_transcript=0bp_to_ENST00000409719_5end | |association_with_transcript=0bp_to_ENST00000409719_5end | ||
|cluster_id=chr2:113342163..113342210,+ | |||
|coexpression_cluster_id=C2143 | |coexpression_cluster_id=C2143 | ||
|description=CAGE_peak_1_at_CHCHD5_5end | |description=CAGE_peak_1_at_CHCHD5_5end | ||
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|ontology_enrichment_celltype=CL:0002321!6.69e-15!248;CL:0000220!7.22e-15!246;CL:0000012!1.28e-11!682;CL:0000183!2.34e-11!59;CL:0000548!3.00e-11!679;CL:0000004!3.00e-11!679;CL:0000255!3.00e-11!679;CL:0000055!8.83e-11!180;CL:0000222!3.32e-10!119;CL:0000144!4.74e-10!625;CL:0002371!6.52e-10!591;CL:0000187!4.56e-09!54;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0000680!1.25e-08!57;CL:0000056!1.25e-08!57;CL:0000355!1.25e-08!57;CL:0000003!3.23e-08!722;CL:0000066!3.11e-07!254 | |ontology_enrichment_celltype=CL:0002321!6.69e-15!248;CL:0000220!7.22e-15!246;CL:0000012!1.28e-11!682;CL:0000183!2.34e-11!59;CL:0000548!3.00e-11!679;CL:0000004!3.00e-11!679;CL:0000255!3.00e-11!679;CL:0000055!8.83e-11!180;CL:0000222!3.32e-10!119;CL:0000144!4.74e-10!625;CL:0002371!6.52e-10!591;CL:0000187!4.56e-09!54;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0000680!1.25e-08!57;CL:0000056!1.25e-08!57;CL:0000355!1.25e-08!57;CL:0000003!3.23e-08!722;CL:0000066!3.11e-07!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.19e-15,250;CL:0000222,1.14e-10,121;CL:0000187,2.99e-09,55;CL:0000393,7.37e-09,61;CL:0000211,7.37e-09,61;CL:0000680,8.22e-09,58;CL:0000056,8.22e-09,58;CL:0000355,8.22e-09,58;CL:0000066,4.22e-07,253;CL:0000192,7.72e-07,43;CL:0000514,7.72e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.14e-11!143;UBERON:0000486!5.09e-10!82;UBERON:0003104!1.10e-09!238;UBERON:0009142!1.10e-09!238;UBERON:0004290!1.47e-09!70;UBERON:0002100!3.21e-09!216;UBERON:0000914!3.90e-09!83;UBERON:0002329!3.90e-09!83;UBERON:0003077!3.90e-09!83;UBERON:0003059!3.90e-09!83;UBERON:0007282!3.90e-09!83;UBERON:0009618!3.90e-09!83;UBERON:0007285!3.90e-09!83;UBERON:0001134!2.58e-08!61;UBERON:0002036!2.58e-08!61;UBERON:0003082!2.58e-08!61;UBERON:0002385!8.50e-08!63;UBERON:0001015!8.50e-08!63;UBERON:0000383!8.50e-08!63;UBERON:0000080!3.07e-07!18;UBERON:0002120!3.07e-07!18;UBERON:0004875!3.07e-07!18;UBERON:0005721!3.07e-07!18;UBERON:0005754!3.07e-07!18;UBERON:0007297!3.07e-07!18 | |ontology_enrichment_uberon=UBERON:0005256!5.14e-11!143;UBERON:0000486!5.09e-10!82;UBERON:0003104!1.10e-09!238;UBERON:0009142!1.10e-09!238;UBERON:0004290!1.47e-09!70;UBERON:0002100!3.21e-09!216;UBERON:0000914!3.90e-09!83;UBERON:0002329!3.90e-09!83;UBERON:0003077!3.90e-09!83;UBERON:0003059!3.90e-09!83;UBERON:0007282!3.90e-09!83;UBERON:0009618!3.90e-09!83;UBERON:0007285!3.90e-09!83;UBERON:0001134!2.58e-08!61;UBERON:0002036!2.58e-08!61;UBERON:0003082!2.58e-08!61;UBERON:0002385!8.50e-08!63;UBERON:0001015!8.50e-08!63;UBERON:0000383!8.50e-08!63;UBERON:0000080!3.07e-07!18;UBERON:0002120!3.07e-07!18;UBERON:0004875!3.07e-07!18;UBERON:0005721!3.07e-07!18;UBERON:0005754!3.07e-07!18;UBERON:0007297!3.07e-07!18 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.76e-12,78;UBERON:0003104,1.03e-10,160;UBERON:0009142,1.03e-10,160;UBERON:0000486,3.36e-10,83;UBERON:0002329,9.67e-10,71;UBERON:0003059,9.67e-10,71;UBERON:0007282,9.67e-10,71;UBERON:0004290,9.67e-10,71;UBERON:0009618,9.67e-10,71;UBERON:0007524,1.00e-09,73;UBERON:0005256,1.78e-09,122;UBERON:0003077,1.96e-09,72;UBERON:0007285,1.96e-09,72;UBERON:0002100,2.99e-09,199;UBERON:0001134,1.71e-08,62;UBERON:0002036,1.71e-08,62;UBERON:0003082,1.71e-08,62;UBERON:0002385,5.69e-08,64;UBERON:0001015,5.69e-08,64;UBERON:0000383,5.69e-08,64;UBERON:0000490,1.31e-07,148 | |||
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| ||
|short_description=p1@CHCHD5 | |short_description=p1@CHCHD5 | ||
}} | }} |
Latest revision as of 08:59, 16 September 2015
Short description: | p1@CHCHD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHCHD5_5end |
Coexpression cluster: | C2143_Mesenchymal_Alveolar_Osteoblast_Renal_Adipocyte_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000409719_5end |
EntrezGene: | CHCHD5 |
HGNC: | 17840 |
UniProt: | Q8N8C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.19e-15 | 250 |
mesodermal cell | 1.14e-10 | 121 |
muscle cell | 2.99e-09 | 55 |
electrically responsive cell | 7.37e-09 | 61 |
electrically active cell | 7.37e-09 | 61 |
muscle precursor cell | 8.22e-09 | 58 |
myoblast | 8.22e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.22e-09 | 58 |
epithelial cell | 4.22e-07 | 253 |
smooth muscle cell | 7.72e-07 | 43 |
smooth muscle myoblast | 7.72e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.76e-12 | 78 |
mesenchyme | 1.03e-10 | 160 |
entire embryonic mesenchyme | 1.03e-10 | 160 |
multilaminar epithelium | 3.36e-10 | 83 |
somite | 9.67e-10 | 71 |
presomitic mesoderm | 9.67e-10 | 71 |
presumptive segmental plate | 9.67e-10 | 71 |
dermomyotome | 9.67e-10 | 71 |
trunk paraxial mesoderm | 9.67e-10 | 71 |
dense mesenchyme tissue | 1.00e-09 | 73 |
trunk mesenchyme | 1.78e-09 | 122 |
paraxial mesoderm | 1.96e-09 | 72 |
presumptive paraxial mesoderm | 1.96e-09 | 72 |
trunk | 2.99e-09 | 199 |
skeletal muscle tissue | 1.71e-08 | 62 |
striated muscle tissue | 1.71e-08 | 62 |
myotome | 1.71e-08 | 62 |
muscle tissue | 5.69e-08 | 64 |
musculature | 5.69e-08 | 64 |
musculature of body | 5.69e-08 | 64 |
unilaminar epithelium | 1.31e-07 | 148 |