FFCP PHASE1:Hg19::chr2:241906812..241906837,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200772 | |EntrezGene=200772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000418218,NR_033841,uc002waf.2_5end | |association_with_transcript=30bp_to_ENST00000418218,NR_033841,uc002waf.2_5end | ||
|cluster_id=chr2:241906812..241906837,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_2_at_LOC200772_5end | |description=CAGE_peak_2_at_LOC200772_5end | ||
|id=chr2:241906812..241906837,- | |id=chr2:241906812..241906837,- | ||
|ontology_enrichment_celltype=CL:0002057!2.08e-65!42;CL:0000860!2.87e-60!45;CL:0002194!5.96e-39!63;CL:0000576!5.96e-39!63;CL:0000040!5.96e-39!63;CL:0000559!5.96e-39!63;CL:0002009!2.00e-37!65;CL:0000766!4.13e-37!76;CL:0000839!5.39e-34!70;CL:0000557!2.29e-33!71;CL:0000763!9.37e-26!112;CL:0000049!9.37e-26!112;CL:0002087!8.54e-25!119;CL:0000738!3.10e-23!140;CL:0000037!1.31e-19!172;CL:0000566!1.31e-19!172;CL:0002031!4.00e-19!124;CL:0000988!8.69e-18!182;CL:0002032!1.74e-17!165;CL:0000837!1.74e-17!165;CL:0002393!1.80e-16!9;CL:0002397!1.80e-16!9;CL:0000875!1.20e-08!3;CL:0002396!1.20e-08!3;CL:0000767!1.77e-08!3;CL:0000842!2.14e-08!3 | |ontology_enrichment_celltype=CL:0002057!2.08e-65!42;CL:0000860!2.87e-60!45;CL:0002194!5.96e-39!63;CL:0000576!5.96e-39!63;CL:0000040!5.96e-39!63;CL:0000559!5.96e-39!63;CL:0002009!2.00e-37!65;CL:0000766!4.13e-37!76;CL:0000839!5.39e-34!70;CL:0000557!2.29e-33!71;CL:0000763!9.37e-26!112;CL:0000049!9.37e-26!112;CL:0002087!8.54e-25!119;CL:0000738!3.10e-23!140;CL:0000037!1.31e-19!172;CL:0000566!1.31e-19!172;CL:0002031!4.00e-19!124;CL:0000988!8.69e-18!182;CL:0002032!1.74e-17!165;CL:0000837!1.74e-17!165;CL:0002393!1.80e-16!9;CL:0002397!1.80e-16!9;CL:0000875!1.20e-08!3;CL:0002396!1.20e-08!3;CL:0000767!1.77e-08!3;CL:0000842!2.14e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.39e-30;33!CL:0002057;3.39e-30;33!CL:0000576;6.09e-29;48!CL:0000473;4.55e-22;39!CL:0000234;4.55e-22;39!CL:0000766;6.09e-18;69!CL:0000875;9.07e-17;3!CL:0002396;9.07e-17;3!CL:0000767;2.41e-16;3!CL:0000226;3.19e-16;3!CL:0000842;3.19e-16;3!CL:0000763;1.92e-13;100!CL:0002087;2.61e-09;104!CL:0002393;3.34e-08;6!CL:0002397;3.34e-08;6!CL:0000738;3.13e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.90e-51,42;CL:0002057,1.90e-51,42;CL:0000473,2.18e-44,48;CL:0000234,2.18e-44,48;CL:0000766,1.15e-36,72;CL:0002194,1.68e-34,59;CL:0000576,1.68e-34,59;CL:0000040,1.68e-34,59;CL:0000559,1.68e-34,59;CL:0002009,3.16e-33,61;CL:0000839,2.27e-30,66;CL:0000557,7.52e-30,67;CL:0000763,5.95e-27,108;CL:0000049,5.95e-27,108;CL:0000738,3.24e-24,136;CL:0002087,5.52e-23,115;CL:0000037,1.33e-21,168;CL:0002393,1.54e-20,9;CL:0002397,1.54e-20,9;CL:0000988,3.59e-20,177;CL:0002032,1.01e-17,161;CL:0000837,1.01e-17,161;CL:0000875,9.11e-17,3;CL:0002396,9.11e-17,3;CL:0000767,2.08e-16,3;CL:0002031,3.01e-16,120;CL:0000226,3.12e-16,3;CL:0000842,3.12e-16,3;CL:0000134,1.62e-07,354;CL:0002320,3.05e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-33;42!CL:0000049;2.97e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.50e-41!102;UBERON:0003061!7.50e-41!102;UBERON:0002193!1.47e-37!112;UBERON:0002405!7.26e-30!115;UBERON:0002371!2.03e-28!80;UBERON:0001474!1.06e-25!86;UBERON:0004765!2.47e-20!101;UBERON:0001434!2.47e-20!101;UBERON:0000178!2.38e-14!15;UBERON:0000179!2.38e-14!15;UBERON:0000463!2.38e-14!15;UBERON:0003081!1.13e-13!216;UBERON:0002204!9.05e-10!167;UBERON:0001896!1.58e-07!3;UBERON:0005290!1.58e-07!3;UBERON:0010096!1.58e-07!3;UBERON:0000926!6.18e-07!448;UBERON:0004120!6.18e-07!448;UBERON:0006603!6.18e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.90e-20;15!UBERON:0000179;3.90e-20;15!UBERON:0000463;3.90e-20;15!UBERON:0002390;8.36e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-38,98;UBERON:0003061,1.97e-38,98;UBERON:0002193,2.61e-34,108;UBERON:0002371,8.98e-26,76;UBERON:0001474,1.51e-23,82;UBERON:0004765,4.89e-21,90;UBERON:0000178,2.77e-20,15;UBERON:0000179,2.77e-20,15;UBERON:0000463,2.77e-20,15;UBERON:0002405,3.31e-20,93;UBERON:0001434,1.85e-18,100;UBERON:0003081,2.67e-15,203;UBERON:0002204,3.70e-09,167;UBERON:0000926,1.34e-07,315;UBERON:0004120,1.34e-07,315;UBERON:0006603,1.34e-07,315;UBERON:0002384,7.24e-07,371 | |||
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| ||
|short_description=p2@LOC200772 | |short_description=p2@LOC200772 | ||
}} | }} |
Latest revision as of 09:10, 16 September 2015
Short description: | p2@LOC200772 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC200772_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 30bp_to_ENST00000418218, NR_033841, uc002waf.2_5end |
EntrezGene: | LOC200772 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-38 | 98 |
blood island | 1.97e-38 | 98 |
hemolymphoid system | 2.61e-34 | 108 |
bone marrow | 8.98e-26 | 76 |
bone element | 1.51e-23 | 82 |
skeletal element | 4.89e-21 | 90 |
blood | 2.77e-20 | 15 |
haemolymphatic fluid | 2.77e-20 | 15 |
organism substance | 2.77e-20 | 15 |
immune system | 3.31e-20 | 93 |
skeletal system | 1.85e-18 | 100 |
lateral plate mesoderm | 2.67e-15 | 203 |
musculoskeletal system | 3.70e-09 | 167 |
mesoderm | 1.34e-07 | 315 |
mesoderm-derived structure | 1.34e-07 | 315 |
presumptive mesoderm | 1.34e-07 | 315 |
connective tissue | 7.24e-07 | 371 |