FFCP PHASE1:Hg19::chr1:117297044..117297099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=914 | |EntrezGene=914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1639 | |HGNC=1639 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JVN7,P06729,Q53F96 | |UniProt=Q5JVN7,P06729,Q53F96 | ||
|association_with_transcript=0bp_to_ENST00000369477,NM_001767,uc001egu.3,uc010owz.1,uc010oxa.1_5end | |association_with_transcript=0bp_to_ENST00000369477,NM_001767,uc001egu.3,uc010owz.1,uc010oxa.1_5end | ||
|cluster_id=chr1:117297044..117297099,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_CD2_5end | |description=CAGE_peak_1_at_CD2_5end | ||
Latest revision as of 09:41, 16 September 2015
| Short description: | p1@CD2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CD2_5end |
| Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
| Association with transcript: | 0bp_to_ENST00000369477, NM_001767, uc001egu.3, uc010owz.1, uc010oxa.1_5end |
| EntrezGene: | CD2 |
| HGNC: | 1639 |
| UniProt: | Q5JVN7P06729Q53F96 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CD2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 1.87e-40 | 136 |
| nongranular leukocyte | 1.81e-33 | 115 |
| hematopoietic stem cell | 5.24e-30 | 168 |
| hematopoietic lineage restricted progenitor cell | 3.54e-28 | 120 |
| hematopoietic cell | 5.36e-27 | 177 |
| T cell | 2.36e-26 | 25 |
| pro-T cell | 2.36e-26 | 25 |
| hematopoietic oligopotent progenitor cell | 2.53e-25 | 161 |
| hematopoietic multipotent progenitor cell | 2.53e-25 | 161 |
| mature alpha-beta T cell | 3.90e-22 | 18 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.18e-23 | 98 |
| blood island | 1.18e-23 | 98 |
| hemolymphoid system | 7.45e-22 | 108 |
| adult organism | 3.81e-20 | 114 |
| immune system | 1.56e-14 | 93 |
| bone marrow | 3.70e-12 | 76 |
| bone element | 2.03e-10 | 82 |
| blood | 3.80e-10 | 15 |
| haemolymphatic fluid | 3.80e-10 | 15 |
| organism substance | 3.80e-10 | 15 |
Showing 1 to 10 of 12 entries
