FFCP PHASE1:Hg19::chr5:151055872..151055921,-: Difference between revisions
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|id=chr5:151055872..151055921,-
|short_description=p14@SPARC
|description=CAGE_peak_14_at_SPARC_5end
|association_with_transcript=-99bp_to_uc003luh.2_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_uc003luh.2_5end | |||
|cluster_id=chr5:151055872..151055921,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_14_at_SPARC_5end | |||
|id=chr5:151055872..151055921,- | |||
|ontology_enrichment_celltype=CL:0002617!2.29e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002188;3.26e-11;5!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:1000413;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.94e-11,5;CL:1000746,2.03e-08,7;CL:1000612,2.03e-08,7;CL:1000413,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.76e-18;3!UBERON:0003353;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!6.48e-08!10;UBERON:0003127!2.52e-07!2;UBERON:0001443!3.70e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0003915;8.37e-07;9!UBERON:0004700;8.37e-07;9!UBERON:0001917;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.03e-08,7;UBERON:0000074,2.03e-08,7;UBERON:0001229,2.03e-08,7;UBERON:0001230,2.03e-08,7;UBERON:0003220,2.03e-08,7;UBERON:0005749,2.03e-08,7;UBERON:0004199,2.03e-08,7;UBERON:0004209,2.03e-08,7;UBERON:0004198,2.03e-08,7;UBERON:0003064,3.65e-08,28;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9;UBERON:0003915,8.85e-07,9;UBERON:0004700,8.85e-07,9;UBERON:0001917,8.85e-07,9 | |||
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| ||
|short_description=p14@SPARC | |||
}} | }} |
Latest revision as of 10:28, 16 September 2015
Short description: | p14@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SPARC_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | -99bp_to_uc003luh.2_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.94e-11 | 5 |
glomerular cell | 2.03e-08 | 7 |
kidney corpuscule cell | 2.03e-08 | 7 |
endothelial cell of artery | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.03e-08 | 7 |
renal glomerulus | 2.03e-08 | 7 |
renal corpuscle | 2.03e-08 | 7 |
glomerular capsule | 2.03e-08 | 7 |
metanephric mesenchyme | 2.03e-08 | 7 |
glomerular tuft | 2.03e-08 | 7 |
S-shaped body | 2.03e-08 | 7 |
renal vesicle | 2.03e-08 | 7 |
comma-shaped body | 2.03e-08 | 7 |
intermediate mesoderm | 3.65e-08 | 28 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |
endothelial tube | 8.85e-07 | 9 |
arterial system endothelium | 8.85e-07 | 9 |
endothelium of artery | 8.85e-07 | 9 |