FFCP PHASE1:Hg19::chr2:113816771..113816777,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:113816771..113816777,+
|short_description=p1@IL36RN
|description=CAGE_peak_1_at_IL36RN_5end
|association_with_transcript=86bp_to_ENST00000393200,NM_012275,...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26525 | |EntrezGene=26525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15561 | |HGNC=15561 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBH0 | |UniProt=Q9UBH0 | ||
|association_with_transcript=86bp_to_ENST00000393200,NM_012275,uc002tit.2_5end | |||
|cluster_id=chr2:113816771..113816777,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_IL36RN_5end | |||
|id=chr2:113816771..113816777,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.50e-16!42;CL:0000860!2.03e-14!45;CL:0002009!1.96e-13!65;CL:0002194!6.77e-13!63;CL:0000576!6.77e-13!63;CL:0000040!6.77e-13!63;CL:0000559!6.77e-13!63;CL:0002076!1.60e-12!43;CL:0000557!1.41e-11!71;CL:0000223!5.19e-11!59;CL:0002159!5.49e-11!13;CL:0000839!8.57e-11!70;CL:0000766!4.43e-10!76;CL:0000622!3.85e-08!5;CL:0000244!8.36e-07!4;CL:0000731!8.36e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.80e-28;33!CL:0002057;7.80e-28;33!CL:0000473;3.54e-23;39!CL:0000234;3.54e-23;39!CL:0002159;5.19e-13;14!CL:0000576;2.29e-12;48!CL:0000244;1.17e-09;4!CL:0000731;1.17e-09;4!CL:0000766;1.58e-08;69!CL:0002577;4.66e-08;3!CL:0000349;2.48e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.01e-23,48;CL:0000234,3.01e-23,48;CL:0000860,1.23e-22,42;CL:0002057,1.23e-22,42;CL:0002009,8.55e-20,61;CL:0002194,7.69e-19,59;CL:0000576,7.69e-19,59;CL:0000040,7.69e-19,59;CL:0000559,7.69e-19,59;CL:0000557,2.05e-17,67;CL:0000839,3.70e-16,66;CL:0000766,2.79e-14,72;CL:0002159,4.75e-13,14;CL:0000244,9.78e-10,4;CL:0000731,9.78e-10,4;CL:0000763,2.33e-08,108;CL:0000049,2.33e-08,108;CL:0002577,4.28e-08,3;CL:0000349,2.34e-07,19;CL:0002031,6.24e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.19e-12!14;UBERON:0000158!2.19e-12!14;UBERON:0002371!2.35e-09!80;UBERON:0000062!1.54e-08!511;UBERON:0001474!3.71e-08!86;UBERON:0003124!4.18e-08!7;UBERON:0004765!1.06e-07!101;UBERON:0001434!1.06e-07!101;UBERON:0000365!1.47e-07!5;UBERON:0001987!2.72e-07!4;UBERON:0004340!2.72e-07!4;UBERON:0000478!2.79e-07!24;UBERON:0002405!8.28e-07!115;UBERON:0000166!8.39e-07!21;UBERON:0002390!8.51e-07!102;UBERON:0003061!8.51e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.01e-10;4!UBERON:0000478;1.24e-08;24!UBERON:0000365;9.93e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-14,76;UBERON:0004765,1.45e-13,90;UBERON:0005631,2.00e-13,14;UBERON:0000158,2.00e-13,14;UBERON:0001474,5.18e-13,82;UBERON:0002405,6.97e-12,93;UBERON:0001434,1.66e-11,100;UBERON:0001987,1.71e-10,4;UBERON:0004340,1.71e-10,4;UBERON:0002390,7.69e-10,98;UBERON:0003061,7.69e-10,98;UBERON:0002193,2.58e-09,108;UBERON:0003124,6.51e-09,7;UBERON:0000478,1.15e-08,24;UBERON:0003081,4.90e-08,203;UBERON:0000365,8.65e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,4.59710612239464,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0.929716147622738,7.40102198439286,5.88442104700697,2.58923153089935,1.2808035326455,1.89185783910868,9.3081333798887,9.68227025375739,8.12558919566051,0.376484679085209,1.09162460023138,1.57306439111559,2.44867113896722,2.24650318953266,7.03270838378945,0,0,0,5.5139755339431,8.5107783703671,11.8336227309159,1.50749199154046,1.5644487552606,1.08594422352558,3.02699751316684,12.5214396235772,7.27863491114034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0217445136539,12.2358866118862,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0.662045904066094,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,5.18217629122586,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60951198716227,2.24803506515239,1.50793458617446,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,3.27605971194933,6.09387765383786,2.81201501960331,0.16798212819886,3.40260233381728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,2.72814814301633,4.99306318531491,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,7.46545199395024,4.55042172225565,0,0,0,0,0,0,0,0,0,1.15699440752685,0,0,0.10115778085555,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,1.08890984861323,2.16530741786592,2.58303223602738,1.68471475667626,7.53831261012349,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,45.6001965848988,3.26661148915902,25.8014989763355,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,5.00176680274681,0.91153644677601,8.30030055797016,5.20594337576678,14.015510977939,3.82801391678303,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0.693373365065693,0,0,0,0,0,0,0,0,6.20729705525884,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,5.39937339723601,0,0,3.35434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37304041038154,0,0.310874401165561,1.62640664988597,0,14.3936995892353,0.155262956876259,0,0,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,4.75590326246111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,1.1441462864015,0,0,0,0.60511520611056,0,2.88097363929565,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,7.71710620414958,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,2.80272163313789,0,0,0,0,0,0,0,0,0.62164849248911,0.85359238546975,7.60385627995501,0,0.118332000730565,0,0,0,2.48165108531456,0,0,0,0,0,0,0,9.71421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0,0.322944549180031,0.186224142887574,0,0,0,87.5221326545785,33.5388635063575,15.5583242463697,1.07583308089015,0.99798106963804,0.0814032686109745,0,0,0,2.34640942403454,0.611207220914332,12.2068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,4.59710612239464,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0.929716147622738,7.40102198439286,5.88442104700697,2.58923153089935,1.2808035326455,1.89185783910868,9.3081333798887,9.68227025375739,8.12558919566051,0.376484679085209,1.09162460023138,1.57306439111559,2.44867113896722,2.24650318953266,7.03270838378945,0,0,0,5.5139755339431,8.5107783703671,11.8336227309159,1.50749199154046,1.5644487552606,1.08594422352558,3.02699751316684,12.5214396235772,7.27863491114034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0217445136539,12.2358866118862,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0.662045904066094,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,5.18217629122586,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60951198716227,2.24803506515239,1.50793458617446,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,3.27605971194933,6.09387765383786,2.81201501960331,0.16798212819886,3.40260233381728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,2.72814814301633,4.99306318531491,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,7.46545199395024,4.55042172225565,0,0,0,0,0,0,0,0,0,1.15699440752685,0,0,0.10115778085555,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,1.08890984861323,2.16530741786592,2.58303223602738,1.68471475667626,7.53831261012349,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,45.6001965848988,3.26661148915902,25.8014989763355,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,5.00176680274681,0.91153644677601,8.30030055797016,5.20594337576678,14.015510977939,3.82801391678303,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0.693373365065693,0,0,0,0,0,0,0,0,6.20729705525884,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,5.39937339723601,0,0,3.35434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37304041038154,0,0.310874401165561,1.62640664988597,0,14.3936995892353,0.155262956876259,0,0,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,4.75590326246111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,1.1441462864015,0,0,0,0.60511520611056,0,2.88097363929565,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,7.71710620414958,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,2.80272163313789,0,0,0,0,0,0,0,0,0.62164849248911,0.85359238546975,7.60385627995501,0,0.118332000730565,0,0,0,2.48165108531456,0,0,0,0,0,0,0,9.71421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0,0.322944549180031,0.186224142887574,0,0,0,87.5221326545785,33.5388635063575,15.5583242463697,1.07583308089015,0.99798106963804,0.0814032686109745,0,0,0,2.34640942403454,0.611207220914332,12.2068853494722,0,0,0 | ||
|short_description=p1@IL36RN | |||
}} | }} |
Latest revision as of 11:42, 16 September 2015
Short description: | p1@IL36RN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL36RN_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 86bp_to_ENST00000393200, NM_012275, uc002tit.2_5end |
EntrezGene: | IL36RN |
HGNC: | 15561 |
UniProt: | Q9UBH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.01e-23 | 48 |
phagocyte | 3.01e-23 | 48 |
classical monocyte | 1.23e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-22 | 42 |
macrophage dendritic cell progenitor | 8.55e-20 | 61 |
monopoietic cell | 7.69e-19 | 59 |
monocyte | 7.69e-19 | 59 |
monoblast | 7.69e-19 | 59 |
promonocyte | 7.69e-19 | 59 |
granulocyte monocyte progenitor cell | 2.05e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.70e-16 | 66 |
myeloid leukocyte | 2.79e-14 | 72 |
general ecto-epithelial cell | 4.75e-13 | 14 |
transitional epithelial cell | 9.78e-10 | 4 |
urothelial cell | 9.78e-10 | 4 |
myeloid cell | 2.33e-08 | 108 |
common myeloid progenitor | 2.33e-08 | 108 |
placental epithelial cell | 4.28e-08 | 3 |
extraembryonic cell | 2.34e-07 | 19 |
hematopoietic lineage restricted progenitor cell | 6.24e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.47e-14 | 76 |
skeletal element | 1.45e-13 | 90 |
extraembryonic membrane | 2.00e-13 | 14 |
membranous layer | 2.00e-13 | 14 |
bone element | 5.18e-13 | 82 |
immune system | 6.97e-12 | 93 |
skeletal system | 1.66e-11 | 100 |
placenta | 1.71e-10 | 4 |
allantois | 1.71e-10 | 4 |
hematopoietic system | 7.69e-10 | 98 |
blood island | 7.69e-10 | 98 |
hemolymphoid system | 2.58e-09 | 108 |
chorion | 6.51e-09 | 7 |
extraembryonic structure | 1.15e-08 | 24 |
lateral plate mesoderm | 4.90e-08 | 203 |
urothelium | 8.65e-08 | 5 |