FFCP PHASE1:Hg19::chr20:44421137..44421162,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:44421137..44421162,+ to FFCP PHASE1:Hg19::chr20:44421137..44421162,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116092 | |EntrezGene=116092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16160 | |HGNC=16160 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2A4 | |UniProt=F2Z2A4 | ||
|association_with_transcript=-12bp_to_ENST00000415790_5end | |||
|cluster_id=chr20:44421137..44421162,+ | |||
|coexpression_cluster_id=C4042 | |||
|description=CAGE_peak_3_at_DNTTIP1_5end | |||
|id=chr20:44421137..44421162,+ | |||
|ontology_enrichment_celltype=CL:0000763!7.72e-42!112;CL:0000049!7.72e-42!112;CL:0000766!3.44e-37!76;CL:0002057!1.72e-36!42;CL:0002009!7.35e-35!65;CL:0002194!4.60e-33!63;CL:0000576!4.60e-33!63;CL:0000040!4.60e-33!63;CL:0000559!4.60e-33!63;CL:0000860!6.85e-33!45;CL:0000557!2.39e-32!71;CL:0000839!6.94e-30!70;CL:0000037!1.52e-29!172;CL:0000566!1.52e-29!172;CL:0000988!6.56e-27!182;CL:0002032!4.01e-26!165;CL:0000837!4.01e-26!165;CL:0000738!9.12e-26!140;CL:0002087!2.39e-17!119;CL:0002031!3.00e-16!124;CL:0000134!4.45e-09!358;CL:0002320!2.47e-08!365;CL:0002393!3.32e-08!9;CL:0002397!3.32e-08!9;CL:0000451!3.37e-07!10;CL:0000094!3.71e-07!8;CL:0000219!5.71e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.65e-47;33!CL:0002057;3.65e-47;33!CL:0000473;1.48e-35;39!CL:0000234;1.48e-35;39!CL:0000576;3.51e-26;48!CL:0000766;1.41e-19;69!CL:0000763;1.49e-14;100!CL:0000094;1.62e-12;8!CL:0000775;6.37e-10;3!CL:0000453;6.39e-10;5!CL:0000081;6.91e-09;11!CL:0000226;2.92e-08;3!CL:0000842;2.92e-08;3!CL:0000738;3.26e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.40e-49,108;CL:0000049,6.40e-49,108;CL:0000860,3.89e-44,42;CL:0002057,3.89e-44,42;CL:0000473,1.54e-43,48;CL:0000234,1.54e-43,48;CL:0000766,3.36e-42,72;CL:0002009,9.00e-37,61;CL:0002194,1.54e-35,59;CL:0000576,1.54e-35,59;CL:0000040,1.54e-35,59;CL:0000559,1.54e-35,59;CL:0000557,9.80e-33,67;CL:0000037,1.17e-32,168;CL:0000839,6.41e-31,66;CL:0000988,2.50e-30,177;CL:0000738,3.23e-29,136;CL:0002032,1.04e-28,161;CL:0000837,1.04e-28,161;CL:0002087,7.51e-18,115;CL:0002031,1.27e-14,120;CL:0000094,8.48e-13,8;CL:0000134,1.02e-10,354;CL:0002320,2.93e-10,361;CL:0000775,5.96e-10,3;CL:0000453,6.14e-10,5;CL:0000081,4.38e-09,11;CL:0000219,1.19e-08,386;CL:0000226,8.65e-08,3;CL:0000842,8.65e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.61e-32;42!CL:0000049;9.35e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.39e-38!102;UBERON:0003061!2.39e-38!102;UBERON:0002193!3.93e-36!112;UBERON:0002371!1.16e-28!80;UBERON:0001474!5.41e-28!86;UBERON:0002405!5.30e-25!115;UBERON:0004765!1.46e-21!101;UBERON:0001434!1.46e-21!101;UBERON:0003081!4.77e-10!216;UBERON:0000178!1.70e-09!15;UBERON:0000179!1.70e-09!15;UBERON:0000463!1.70e-09!15;UBERON:0002204!8.89e-08!167;UBERON:0002384!1.27e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.61e-24;15!UBERON:0000179;8.61e-24;15!UBERON:0000463;8.61e-24;15!UBERON:0002390;3.04e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.32e-42,98;UBERON:0003061,2.32e-42,98;UBERON:0002193,2.18e-37,108;UBERON:0001474,3.42e-29,82;UBERON:0002371,7.20e-28,76;UBERON:0004765,8.34e-26,90;UBERON:0000178,9.03e-24,15;UBERON:0000179,9.03e-24,15;UBERON:0000463,9.03e-24,15;UBERON:0001434,2.46e-22,100;UBERON:0002405,3.00e-21,93;UBERON:0003081,1.39e-15,203;UBERON:0002204,5.89e-10,167;UBERON:0002384,1.24e-09,371;UBERON:0000926,2.02e-07,315;UBERON:0004120,2.02e-07,315;UBERON:0006603,2.02e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.91914699048606,1.85779347979291,0,0,0,0,0,0.587200878669695,3.32397245119126,0.802177789880567,0.868043482863407,0.895661896959697,0.32389366601898,0.257575567634187,2.90796477559129,1.88937971844405,3.39617685662943,3.25400651667958,2.05583944010913,1.85823822537062,2.01384674625505,2.0492856522328,1.6553756092201,1.72372840368309,1.93645405075148,0,2.82363509313907,1.63743690034707,2.69668181334102,1.53041946185451,4.17207735198922,1.27867425159808,0.659702600373432,4.18873681005427,2.13112375266347,0.870627715885752,2.26954089876456,0.622822248995575,0.75374599577023,2.08593167368081,0.868755378820466,1.21079900526674,2.94622108790052,1.58231193720442,1.26753171787165,0.850417199860174,0.838634582033504,2.58355851636939,2.55300717830561,0.803627933485401,0.285012743741249,0.59675003159727,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0.953962497221368,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.40402559083543,1.78357394746474,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,0,0,0,0,0.167516265334349,0,3.74503511973591,5.9832291840805,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.03384013061444,1.07857100409308,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.40101294060657,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,4.58782324285425,3.41788312304498,1.90585420366231,3.70226045777575,1.94541993357815,2.70015718619057,1.58625035258854,0,0,0,0,0,0,0,0,3.06408592211787,3.81012448902989,1.29848776109822,1.12318871245384,0.684704037099577,0.626719583092093,0,0,0,0.403599414382095,0.851692475380653,1.03051603426729,0,1.3420566473545,0.834245708559542,1.75849285861836,0,0,1.89318974933188,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0.269605053441981,0,2.04628948090749,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,3.66618086960175,0,0,0,0.134802265961354,0,0,0,0.19566461893209,9.71121518136371,0,0,0,0.063186579628488,0,0,0,0.992975867626496,0.941798755221676,0,0.284609546029793,1.10939738410511,0.173559738335131,0.0979923974143777,0,0,1.20390222730132,0,0,0,0,3.08896443420251,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,1.15272333723285,0,0,0,0.99402028452346,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0.408610218334727,0,0,0,0.899895566206002,3.0952078182318,0,0,0.0788057072991982,0,28.4064905237203,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0,0.704815022316672,0.213574825135389,0,0,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,5.0663680298241,3.72021552877417,2.61704630809351,0,0,0.845248493434508,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,17.5745614989469,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426067023795788,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0.118920090777569,0,0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| ||
|short_description=p3@DNTTIP1 | |||
}} | }} |
Latest revision as of 12:28, 16 September 2015
Short description: | p3@DNTTIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNTTIP1_5end |
Coexpression cluster: | C4042_large_ductal_prostate_Neutrophils_Eosinophils_Whole_colon |
Association with transcript: | -12bp_to_ENST00000415790_5end |
EntrezGene: | DNTTIP1 |
HGNC: | 16160 |
UniProt: | F2Z2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.40e-49 | 108 |
common myeloid progenitor | 6.40e-49 | 108 |
classical monocyte | 3.89e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.89e-44 | 42 |
defensive cell | 1.54e-43 | 48 |
phagocyte | 1.54e-43 | 48 |
myeloid leukocyte | 3.36e-42 | 72 |
macrophage dendritic cell progenitor | 9.00e-37 | 61 |
monopoietic cell | 1.54e-35 | 59 |
monocyte | 1.54e-35 | 59 |
monoblast | 1.54e-35 | 59 |
promonocyte | 1.54e-35 | 59 |
granulocyte monocyte progenitor cell | 9.80e-33 | 67 |
hematopoietic stem cell | 1.17e-32 | 168 |
myeloid lineage restricted progenitor cell | 6.41e-31 | 66 |
hematopoietic cell | 2.50e-30 | 177 |
leukocyte | 3.23e-29 | 136 |
hematopoietic oligopotent progenitor cell | 1.04e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-28 | 161 |
nongranular leukocyte | 7.51e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.27e-14 | 120 |
granulocyte | 8.48e-13 | 8 |
mesenchymal cell | 1.02e-10 | 354 |
connective tissue cell | 2.93e-10 | 361 |
neutrophil | 5.96e-10 | 3 |
Langerhans cell | 6.14e-10 | 5 |
blood cell | 4.38e-09 | 11 |
motile cell | 1.19e-08 | 386 |
single nucleate cell | 8.65e-08 | 3 |
mononuclear cell | 8.65e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.32e-42 | 98 |
blood island | 2.32e-42 | 98 |
hemolymphoid system | 2.18e-37 | 108 |
bone element | 3.42e-29 | 82 |
bone marrow | 7.20e-28 | 76 |
skeletal element | 8.34e-26 | 90 |
blood | 9.03e-24 | 15 |
haemolymphatic fluid | 9.03e-24 | 15 |
organism substance | 9.03e-24 | 15 |
skeletal system | 2.46e-22 | 100 |
immune system | 3.00e-21 | 93 |
lateral plate mesoderm | 1.39e-15 | 203 |
musculoskeletal system | 5.89e-10 | 167 |
connective tissue | 1.24e-09 | 371 |
mesoderm | 2.02e-07 | 315 |
mesoderm-derived structure | 2.02e-07 | 315 |
presumptive mesoderm | 2.02e-07 | 315 |