FFCP PHASE1:Hg19::chr12:113682338..113682357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53373 | |EntrezGene=53373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18182 | |HGNC=18182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000428632_5end | |association_with_transcript=30bp_to_ENST00000428632_5end | ||
|cluster_id=chr12:113682338..113682357,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_9_at_TPCN1_5end | |description=CAGE_peak_9_at_TPCN1_5end | ||
|id=chr12:113682338..113682357,+ | |id=chr12:113682338..113682357,+ | ||
|ontology_enrichment_celltype=CL:0002274!7.99e-11!5;CL:0000457!7.99e-11!5;CL:0002191!7.99e-11!5;CL:0000097!7.99e-11!5;CL:0000831!7.99e-11!5;CL:0002028!7.99e-11!5;CL:0000317!1.28e-07!2;CL:1000448!1.28e-07!2;CL:0002308!1.28e-07!2;CL:0002140!1.28e-07!2 | |ontology_enrichment_celltype=CL:0002274!7.99e-11!5;CL:0000457!7.99e-11!5;CL:0002191!7.99e-11!5;CL:0000097!7.99e-11!5;CL:0000831!7.99e-11!5;CL:0002028!7.99e-11!5;CL:0000317!1.28e-07!2;CL:1000448!1.28e-07!2;CL:0002308!1.28e-07!2;CL:0002140!1.28e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.03e-08;4!CL:0000244;2.43e-08;4!CL:0000731;2.43e-08;4!CL:0000097;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.11e-08,4;CL:0000244,2.43e-08,4;CL:0000731,2.43e-08,4;CL:0000097,6.04e-07,5;CL:0002028,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.41e-85;3!UBERON:0000358;1.54e-29;1!UBERON:0008425;1.54e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.03e-08;4!DOID:1612;2.03e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.11e-08,4;DOID:1612,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.80e-36!57;UBERON:0005068!5.80e-36!57;UBERON:0006241!5.80e-36!57;UBERON:0007135!5.80e-36!57;UBERON:0002616!1.69e-34!59;UBERON:0000955!2.47e-30!69;UBERON:0006238!2.47e-30!69;UBERON:0007023!1.35e-29!115;UBERON:0000073!6.99e-29!94;UBERON:0001016!6.99e-29!94;UBERON:0005743!1.79e-28!86;UBERON:0001017!3.32e-28!82;UBERON:0002346!3.95e-27!90;UBERON:0003075!9.19e-27!86;UBERON:0007284!9.19e-27!86;UBERON:0001893!3.75e-26!34;UBERON:0002020!3.99e-26!34;UBERON:0003528!3.99e-26!34;UBERON:0002619!4.29e-26!22;UBERON:0001869!4.58e-25!32;UBERON:0002791!3.50e-24!33;UBERON:0002780!2.58e-23!41;UBERON:0001890!2.58e-23!41;UBERON:0006240!2.58e-23!41;UBERON:0003080!1.19e-22!42;UBERON:0000956!1.22e-22!25;UBERON:0000203!1.22e-22!25;UBERON:0001950!3.83e-21!20;UBERON:0004733!4.54e-19!12;UBERON:0002028!4.54e-19!12;UBERON:0007277!4.54e-19!12;UBERON:0004732!1.83e-17!13;UBERON:0000924!2.11e-17!173;UBERON:0006601!2.11e-17!173;UBERON:0004121!7.39e-17!169;UBERON:0002680!5.95e-16!9;UBERON:0001895!5.95e-16!9;UBERON:0010092!5.95e-16!9;UBERON:0003056!9.15e-16!61;UBERON:0000033!5.21e-15!123;UBERON:0003076!6.74e-15!15;UBERON:0003057!6.74e-15!15;UBERON:0000153!5.78e-14!129;UBERON:0007811!5.78e-14!129;UBERON:0000349!2.85e-10!5;UBERON:0001872!1.74e-09!5;UBERON:0000988!3.97e-09!3;UBERON:0002037!6.00e-09!6;UBERON:0006215!6.00e-09!6;UBERON:0002298!7.48e-09!8;UBERON:0000200!4.74e-08!6;UBERON:0001954!1.20e-07!2;UBERON:0003022!1.20e-07!2;UBERON:0002421!1.20e-07!2;UBERON:0002600!1.20e-07!2;UBERON:0002419!1.28e-07!2;UBERON:0007771!1.28e-07!2;UBERON:0003297!1.28e-07!2;UBERON:0001821!1.28e-07!2;UBERON:0003487!1.28e-07!2;UBERON:0001820!1.28e-07!2;UBERON:0005089!1.28e-07!2;UBERON:0005088!1.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.86e-43;6!UBERON:0002680;5.12e-29;9!UBERON:0001895;5.12e-29;9!UBERON:0004733;5.48e-22;12!UBERON:0002028;5.48e-22;12!UBERON:0004732;2.31e-20;13!UBERON:0001911;2.03e-08;4!UBERON:0000365;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.62e-43,6;UBERON:0006215,5.62e-43,6;UBERON:0002680,5.64e-29,9;UBERON:0001895,5.64e-29,9;UBERON:0010092,5.64e-29,9;UBERON:0004733,5.89e-22,12;UBERON:0002028,5.89e-22,12;UBERON:0007277,5.89e-22,12;UBERON:0004732,2.47e-20,13;UBERON:0003076,9.83e-18,15;UBERON:0003057,9.83e-18,15;UBERON:0001911,2.11e-08,4;UBERON:0005333,2.11e-08,4;UBERON:0008425,2.11e-08,4;UBERON:0005311,2.11e-08,4;UBERON:0000365,6.39e-07,5 | |||
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| ||
|short_description=p9@TPCN1 | |short_description=p9@TPCN1 | ||
}} | }} |
Latest revision as of 12:33, 16 September 2015
Short description: | p9@TPCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TPCN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 30bp_to_ENST00000428632_5end |
EntrezGene: | TPCN1 |
HGNC: | 18182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.11e-08 | 4 |
transitional epithelial cell | 2.43e-08 | 4 |
urothelial cell | 2.43e-08 | 4 |
mast cell | 6.04e-07 | 5 |
basophil mast progenitor cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.62e-43 | 6 |
rhombic lip | 5.62e-43 | 6 |
regional part of metencephalon | 5.64e-29 | 9 |
metencephalon | 5.64e-29 | 9 |
future metencephalon | 5.64e-29 | 9 |
segmental subdivision of hindbrain | 5.89e-22 | 12 |
hindbrain | 5.89e-22 | 12 |
presumptive hindbrain | 5.89e-22 | 12 |
segmental subdivision of nervous system | 2.47e-20 | 13 |
posterior neural tube | 9.83e-18 | 15 |
chordal neural plate | 9.83e-18 | 15 |
mammary gland | 2.11e-08 | 4 |
mammary bud | 2.11e-08 | 4 |
mammary ridge | 2.11e-08 | 4 |
mammary placode | 2.11e-08 | 4 |
urothelium | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.11e-08 | 4 |
breast cancer | 2.11e-08 | 4 |