FFCP PHASE1:Hg19::chr20:44521809..44521827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5476 | |EntrezGene=5476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9251 | |HGNC=9251 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=209bp_to_ENST00000493522_5end | |association_with_transcript=209bp_to_ENST00000493522_5end | ||
|cluster_id=chr20:44521809..44521827,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_11_at_CTSA_5end | |description=CAGE_peak_11_at_CTSA_5end | ||
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|ontology_enrichment_celltype=CL:0000838!5.39e-49!52;CL:0000542!7.96e-48!53;CL:0000051!7.96e-48!53;CL:0002087!1.53e-32!119;CL:0000037!1.63e-32!172;CL:0000566!1.63e-32!172;CL:0000738!5.42e-32!140;CL:0000084!5.93e-32!25;CL:0000827!5.93e-32!25;CL:0000791!4.09e-31!18;CL:0000789!4.09e-31!18;CL:0002420!4.09e-31!18;CL:0002419!4.09e-31!18;CL:0000790!4.09e-31!18;CL:0002032!1.22e-30!165;CL:0000837!1.22e-30!165;CL:0002031!2.82e-30!124;CL:0000988!1.10e-29!182;CL:0000625!5.88e-22!11;CL:0000945!2.21e-14!24;CL:0000826!2.21e-14!24;CL:0000624!6.26e-13!6;CL:0000236!1.28e-09!14;CL:0000134!1.62e-07!358;CL:0000898!2.26e-07!3;CL:0002320!4.49e-07!365;CL:0000623!5.47e-07!3;CL:0000825!5.47e-07!3 | |ontology_enrichment_celltype=CL:0000838!5.39e-49!52;CL:0000542!7.96e-48!53;CL:0000051!7.96e-48!53;CL:0002087!1.53e-32!119;CL:0000037!1.63e-32!172;CL:0000566!1.63e-32!172;CL:0000738!5.42e-32!140;CL:0000084!5.93e-32!25;CL:0000827!5.93e-32!25;CL:0000791!4.09e-31!18;CL:0000789!4.09e-31!18;CL:0002420!4.09e-31!18;CL:0002419!4.09e-31!18;CL:0000790!4.09e-31!18;CL:0002032!1.22e-30!165;CL:0000837!1.22e-30!165;CL:0002031!2.82e-30!124;CL:0000988!1.10e-29!182;CL:0000625!5.88e-22!11;CL:0000945!2.21e-14!24;CL:0000826!2.21e-14!24;CL:0000624!6.26e-13!6;CL:0000236!1.28e-09!14;CL:0000134!1.62e-07!358;CL:0000898!2.26e-07!3;CL:0002320!4.49e-07!365;CL:0000623!5.47e-07!3;CL:0000825!5.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.95e-59;18!CL:0000789;4.95e-59;18!CL:0002419;4.95e-59;18!CL:0000084;9.96e-53;25!CL:0000625;1.94e-38;11!CL:0000542;4.39e-31;53!CL:0000624;6.69e-26;6!CL:0000898;4.89e-14;3!CL:0000623;1.96e-13;3!CL:0000815;6.75e-10;2!CL:0000792;6.75e-10;2!CL:0002677;6.75e-10;2!CL:0002087;1.57e-07;104 | |ontology_enrichment_celltype_v019=CL:0000791;4.95e-59;18!CL:0000789;4.95e-59;18!CL:0002419;4.95e-59;18!CL:0000084;9.96e-53;25!CL:0000625;1.94e-38;11!CL:0000542;4.39e-31;53!CL:0000624;6.69e-26;6!CL:0000898;4.89e-14;3!CL:0000623;1.96e-13;3!CL:0000815;6.75e-10;2!CL:0000792;6.75e-10;2!CL:0002677;6.75e-10;2!CL:0002087;1.57e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-59,18;CL:0000789,1.22e-59,18;CL:0002420,1.22e-59,18;CL:0002419,1.22e-59,18;CL:0000790,1.22e-59,18;CL:0000838,1.65e-54,52;CL:0000542,2.34e-53,53;CL:0000051,2.34e-53,53;CL:0000084,5.62e-53,25;CL:0000827,5.62e-53,25;CL:0000625,1.18e-38,11;CL:0000624,2.42e-26,6;CL:0000738,4.43e-23,136;CL:0002087,1.25e-22,115;CL:0000037,6.70e-22,168;CL:0002032,1.29e-21,161;CL:0000837,1.29e-21,161;CL:0000988,2.10e-20,177;CL:0002031,9.66e-20,120;CL:0000898,3.16e-14,3;CL:0000623,2.15e-13,3;CL:0000825,2.15e-13,3;CL:0000815,4.34e-10,2;CL:0000792,4.34e-10,2;CL:0002677,4.34e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.95e-59;18!CL:0000051;4.39e-31;53 | |ontology_enrichment_development_v019=CL:0000790;4.95e-59;18!CL:0000051;4.39e-31;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.04e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!7.04e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p11@CTSA | |short_description=p11@CTSA | ||
}} | }} |
Latest revision as of 13:02, 16 September 2015
Short description: | p11@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CTSA_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 209bp_to_ENST00000493522_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.22e-59 | 18 |
alpha-beta T cell | 1.22e-59 | 18 |
immature T cell | 1.22e-59 | 18 |
mature T cell | 1.22e-59 | 18 |
immature alpha-beta T cell | 1.22e-59 | 18 |
lymphoid lineage restricted progenitor cell | 1.65e-54 | 52 |
lymphocyte | 2.34e-53 | 53 |
common lymphoid progenitor | 2.34e-53 | 53 |
T cell | 5.62e-53 | 25 |
pro-T cell | 5.62e-53 | 25 |
CD8-positive, alpha-beta T cell | 1.18e-38 | 11 |
CD4-positive, alpha-beta T cell | 2.42e-26 | 6 |
leukocyte | 4.43e-23 | 136 |
nongranular leukocyte | 1.25e-22 | 115 |
hematopoietic stem cell | 6.70e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.29e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-21 | 161 |
hematopoietic cell | 2.10e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 9.66e-20 | 120 |
naive T cell | 3.16e-14 | 3 |
natural killer cell | 2.15e-13 | 3 |
pro-NK cell | 2.15e-13 | 3 |
regulatory T cell | 4.34e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.34e-10 | 2 |
naive regulatory T cell | 4.34e-10 | 2 |