FFCP PHASE1:Hg19::chr13:111365602..111365615,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:111365602..111365615,+ to FFCP PHASE1:Hg19::chr13:111365602..111365615,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3621 | |EntrezGene=3621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6062 | |HGNC=6062 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK53 | |UniProt=Q9UK53 | ||
|association_with_transcript=0bp_to_NM_198218,uc001vrg.2_5end | |||
|cluster_id=chr13:111365602..111365615,+ | |||
|description=CAGE_peak_3_at_ING1_5end | |||
|id=chr13:111365602..111365615,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.10e-24!140;CL:0000037!1.10e-23!172;CL:0000566!1.10e-23!172;CL:0002087!1.57e-22!119;CL:0000988!3.46e-22!182;CL:0002032!1.20e-21!165;CL:0000837!1.20e-21!165;CL:0002031!5.43e-21!124;CL:0000860!3.12e-17!45;CL:0002057!3.45e-17!42;CL:0000542!1.83e-16!53;CL:0000051!1.83e-16!53;CL:0000838!4.45e-16!52;CL:0000084!8.34e-09!25;CL:0000827!8.34e-09!25;CL:0000766!1.13e-08!76;CL:0000763!5.63e-08!112;CL:0000049!5.63e-08!112;CL:0002009!2.26e-07!65;CL:0002194!2.83e-07!63;CL:0000576!2.83e-07!63;CL:0000040!2.83e-07!63;CL:0000559!2.83e-07!63;CL:0000557!4.26e-07!71;CL:0000945!4.28e-07!24;CL:0000826!4.28e-07!24;CL:0000839!5.05e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.64e-15;33!CL:0002057;2.64e-15;33!CL:0000542;1.45e-10;53!CL:0000473;1.49e-09;39!CL:0000234;1.49e-09;39!CL:0002087;4.46e-09;104!CL:0000084;4.60e-09;25!CL:0000576;9.12e-08;48!CL:0000945;5.32e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.67e-25,136;CL:0000037,1.61e-24,168;CL:0002087,2.31e-24,115;CL:0000988,5.15e-23,177;CL:0002032,2.07e-22,161;CL:0000837,2.07e-22,161;CL:0002031,5.16e-22,120;CL:0000860,1.13e-17,42;CL:0002057,1.13e-17,42;CL:0000542,1.05e-16,53;CL:0000051,1.05e-16,53;CL:0000838,2.63e-16,52;CL:0000473,1.39e-13,48;CL:0000234,1.39e-13,48;CL:0000766,1.18e-09,72;CL:0000084,4.98e-09,25;CL:0000827,4.98e-09,25;CL:0002194,2.33e-08,59;CL:0000576,2.33e-08,59;CL:0000040,2.33e-08,59;CL:0000559,2.33e-08,59;CL:0000763,2.57e-08,108;CL:0000049,2.57e-08,108;CL:0002009,2.60e-08,61;CL:0000557,8.11e-08,67;CL:0000839,1.17e-07,66;CL:0000945,4.54e-07,24;CL:0000826,4.54e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.48e-13;42!CL:0000051;1.45e-10;53 | |||
|ontology_enrichment_disease=DOID:162!3.27e-13!235;DOID:14566!5.01e-12!239;DOID:0050686!9.40e-09!137;DOID:0050687!1.57e-08!143;DOID:305!2.11e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.14e-13,235;DOID:14566,8.95e-12,239;DOID:0050686,1.32e-08,137;DOID:0050687,1.82e-08,143;DOID:305,3.89e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.58e-10!102;UBERON:0003061!4.58e-10!102;UBERON:0002193!1.44e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.60e-11,98;UBERON:0003061,7.60e-11,98;UBERON:0002193,3.00e-08,108;UBERON:0002371,3.61e-07,76;UBERON:0001474,4.86e-07,82 | |||
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| ||
|short_description=p3@ING1 | |||
}} | }} |
Latest revision as of 13:23, 16 September 2015
Short description: | p3@ING1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ING1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_198218, uc001vrg.2_5end |
EntrezGene: | ING1 |
HGNC: | 6062 |
UniProt: | Q9UK53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.67e-25 | 136 |
hematopoietic stem cell | 1.61e-24 | 168 |
nongranular leukocyte | 2.31e-24 | 115 |
hematopoietic cell | 5.15e-23 | 177 |
hematopoietic oligopotent progenitor cell | 2.07e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 5.16e-22 | 120 |
classical monocyte | 1.13e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-17 | 42 |
lymphocyte | 1.05e-16 | 53 |
common lymphoid progenitor | 1.05e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.63e-16 | 52 |
defensive cell | 1.39e-13 | 48 |
phagocyte | 1.39e-13 | 48 |
myeloid leukocyte | 1.18e-09 | 72 |
T cell | 4.98e-09 | 25 |
pro-T cell | 4.98e-09 | 25 |
monopoietic cell | 2.33e-08 | 59 |
monocyte | 2.33e-08 | 59 |
monoblast | 2.33e-08 | 59 |
promonocyte | 2.33e-08 | 59 |
myeloid cell | 2.57e-08 | 108 |
common myeloid progenitor | 2.57e-08 | 108 |
macrophage dendritic cell progenitor | 2.60e-08 | 61 |
granulocyte monocyte progenitor cell | 8.11e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.17e-07 | 66 |
lymphocyte of B lineage | 4.54e-07 | 24 |
pro-B cell | 4.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.60e-11 | 98 |
blood island | 7.60e-11 | 98 |
hemolymphoid system | 3.00e-08 | 108 |
bone marrow | 3.61e-07 | 76 |
bone element | 4.86e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.14e-13 | 235 |
disease of cellular proliferation | 8.95e-12 | 239 |
organ system cancer | 1.32e-08 | 137 |
cell type cancer | 1.82e-08 | 143 |
carcinoma | 3.89e-07 | 106 |