FFCP PHASE1:Hg19::chr1:1260169..1260242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80772 | |EntrezGene=80772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28116 | |HGNC=28116 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TA50 | |UniProt=Q5TA50 | ||
|association_with_transcript=22bp_to_ENST00000343938_5end | |association_with_transcript=22bp_to_ENST00000343938_5end | ||
|cluster_id=chr1:1260169..1260242,+ | |||
|description=CAGE_peak_1_at_GLTPD1_5end | |description=CAGE_peak_1_at_GLTPD1_5end | ||
|id=chr1:1260169..1260242,+ | |id=chr1:1260169..1260242,+ | ||
|ontology_enrichment_celltype=CL:0000115;3.35e-12;36!CL:0002139;5.49e-11;24!CL:0002078;1.33e-09;45!CL:0000071;2.87e-09;18!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:1000449;2.35e-07;15!CL:1000497;8.04e-07;17!CL:0002518;8.04e-07;17 | |ontology_enrichment_celltype=CL:0000220!9.15e-17!246;CL:0002321!5.98e-16!248;CL:0000222!6.61e-15!119;CL:0002078!2.73e-14!44;CL:0000115!2.85e-14!35;CL:0000066!7.06e-14!254;CL:0000213!2.53e-12!57;CL:0000215!2.53e-12!57;CL:0002139!5.65e-11!24;CL:0000071!2.84e-09!18;CL:0002546!2.84e-09!18;CL:0000076!1.18e-07!62;CL:1000449!2.60e-07!16;CL:1000497!7.80e-07!18;CL:0002518!7.80e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000115;3.35e-12;36!CL:0002139;5.49e-11;24!CL:0002078;1.33e-09;45!CL:0000071;2.87e-09;18!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:1000449;2.35e-07;15!CL:1000497;8.04e-07;17!CL:0002518;8.04e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.61e-16,250;CL:0000222,2.89e-15,121;CL:0002078,1.44e-14,45;CL:0000115,1.54e-14,36;CL:0000066,9.04e-14,253;CL:0000213,1.35e-12,58;CL:0000215,1.35e-12,58;CL:0002139,5.65e-11,24;CL:0000071,2.84e-09,18;CL:0002546,2.84e-09,18;CL:0000076,9.70e-08,63;CL:1000449,2.39e-07,15;CL:1000497,7.84e-07,17;CL:0002518,7.84e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.87e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;2.87e-09;18!UBERON:0001986;2.87e-09;18!UBERON:0004852;2.87e-09;18!UBERON:0003914;7.19e-08;74!UBERON:0000487;1.65e-07;22!UBERON:0006555;2.35e-07;15!UBERON:0004819;2.35e-07;15!UBERON:0001285;2.35e-07;15!UBERON:0007684;2.35e-07;15!UBERON:0000353;3.01e-07;15!UBERON:0007500;4.25e-07;56!UBERON:0001981;4.25e-07;56!UBERON:0004537;4.25e-07;56!UBERON:0000055;4.30e-07;65 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.30e-15!118;UBERON:0000055!4.05e-14!69;UBERON:0004111!7.93e-13!241;UBERON:0002049!8.27e-13!79;UBERON:0007798!8.27e-13!79;UBERON:0004872!4.01e-12!84;UBERON:0001981!4.35e-12!60;UBERON:0007500!4.35e-12!60;UBERON:0004537!4.35e-12!60;UBERON:0006965!4.35e-12!60;UBERON:0000475!7.11e-12!365;UBERON:0002100!2.73e-11!216;UBERON:0000119!8.50e-11!312;UBERON:0003104!1.18e-10!238;UBERON:0009142!1.18e-10!238;UBERON:0009569!1.49e-10!113;UBERON:0000483!2.18e-10!309;UBERON:0000477!5.61e-10!286;UBERON:0001009!2.52e-09!113;UBERON:0001986!2.84e-09!18;UBERON:0004638!2.84e-09!18;UBERON:0004852!2.84e-09!18;UBERON:0000481!6.12e-09!347;UBERON:0000025!1.05e-08!194;UBERON:0005256!1.13e-08!143;UBERON:0000466!1.33e-08!126;UBERON:0004535!2.89e-08!110;UBERON:0003103!3.01e-08!69;UBERON:0000080!3.84e-08!18;UBERON:0002120!3.84e-08!18;UBERON:0004875!3.84e-08!18;UBERON:0005721!3.84e-08!18;UBERON:0005754!3.84e-08!18;UBERON:0007297!3.84e-08!18;UBERON:0001637!3.94e-08!42;UBERON:0003509!3.94e-08!42;UBERON:0004572!3.94e-08!42;UBERON:0000464!7.33e-08!104;UBERON:0006555!7.70e-08!17;UBERON:0005103!7.70e-08!17;UBERON:0000083!7.70e-08!17;UBERON:0009201!7.70e-08!17;UBERON:0004819!7.70e-08!17;UBERON:0006553!7.70e-08!17;UBERON:0003074!7.70e-08!17;UBERON:0003060!7.70e-08!17;UBERON:0005177!1.14e-07!107;UBERON:0000487!1.54e-07!22;UBERON:0004876!1.88e-07!20;UBERON:0000490!1.89e-07!138;UBERON:0004211!2.60e-07!16;UBERON:0001285!2.60e-07!16;UBERON:0007684!2.60e-07!16;UBERON:0003220!2.60e-07!16;UBERON:0004208!2.60e-07!16;UBERON:0003887!2.71e-07!21;UBERON:0000467!5.98e-07!625;UBERON:0002417!9.16e-07!61;UBERON:0000916!9.16e-07!61;UBERON:0000353!9.35e-07!17;UBERON:0000480!9.74e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.87e-09;18!UBERON:0001986;2.87e-09;18!UBERON:0004852;2.87e-09;18!UBERON:0003914;7.19e-08;74!UBERON:0000487;1.65e-07;22!UBERON:0006555;2.35e-07;15!UBERON:0004819;2.35e-07;15!UBERON:0001285;2.35e-07;15!UBERON:0007684;2.35e-07;15!UBERON:0000353;3.01e-07;15!UBERON:0007500;4.25e-07;56!UBERON:0001981;4.25e-07;56!UBERON:0004537;4.25e-07;56!UBERON:0000055;4.30e-07;65 | |||
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| ||
|short_description=p1@GLTPD1 | |short_description=p1@GLTPD1 | ||
}} | }} |
Latest revision as of 14:14, 16 September 2015
Short description: | p1@GLTPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLTPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000343938_5end |
EntrezGene: | GLTPD1 |
HGNC: | 28116 |
UniProt: | Q5TA50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.61e-16 | 250 |
mesodermal cell | 2.89e-15 | 121 |
meso-epithelial cell | 1.44e-14 | 45 |
endothelial cell | 1.54e-14 | 36 |
epithelial cell | 9.04e-14 | 253 |
lining cell | 1.35e-12 | 58 |
barrier cell | 1.35e-12 | 58 |
endothelial cell of vascular tree | 5.65e-11 | 24 |
blood vessel endothelial cell | 2.84e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.84e-09 | 18 |
squamous epithelial cell | 9.70e-08 | 63 |
epithelial cell of nephron | 2.39e-07 | 15 |
kidney cell | 7.84e-07 | 17 |
kidney epithelial cell | 7.84e-07 | 17 |