FFCP PHASE1:Hg19::chr2:118846114..118846125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51141 | |EntrezGene=51141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20452 | |HGNC=20452 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467223_5end | |association_with_transcript=0bp_to_ENST00000467223_5end | ||
|cluster_id=chr2:118846114..118846125,+ | |||
|description=CAGE_peak_6_at_INSIG2_5end | |description=CAGE_peak_6_at_INSIG2_5end | ||
|id=chr2:118846114..118846125,+ | |id=chr2:118846114..118846125,+ | ||
Latest revision as of 15:56, 16 September 2015
| Short description: | p6@INSIG2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_INSIG2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000467223_5end |
| EntrezGene: | INSIG2 |
| HGNC: | 20452 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@INSIG2 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pneumocyte | 5.96e-34 | 3 |
| mammary gland epithelial cell | 5.56e-26 | 4 |
| epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
| epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
| respiratory epithelial cell | 5.70e-09 | 13 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| bronchoalveolar duct junction | 4.52e-50 | 2 |
| alveolar duct | 4.52e-50 | 2 |
| bronchiole | 4.52e-50 | 2 |
| pulmonary alveolus epithelium | 5.96e-34 | 3 |
| alveolus | 5.96e-34 | 3 |
| pulmonary lobule | 5.96e-34 | 3 |
| lobule | 5.96e-34 | 3 |
| alveolus of lung | 5.96e-34 | 3 |
| alveolar system | 5.96e-34 | 3 |
| pulmonary acinus | 5.96e-34 | 3 |
Showing 1 to 10 of 24 entries
| Ontology term | p-value | n |
|---|---|---|
| lung adenocarcinoma | 4.52e-50 | 2 |
| thoracic cancer | 5.56e-26 | 4 |
| breast cancer | 5.56e-26 | 4 |
| non-small cell lung carcinoma | 5.15e-21 | 5 |
| bronchus cancer | 1.91e-15 | 7 |
| bronchogenic carcinoma | 1.91e-15 | 7 |
| lung carcinoma | 2.45e-12 | 9 |
| lung cancer | 5.93e-08 | 15 |
| respiratory system cancer | 1.54e-07 | 16 |
Showing 1 to 9 of 9 entries
