FFCP PHASE1:Hg19::chr12:11802547..11802560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2120 | |EntrezGene=2120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3495 | |HGNC=3495 | ||
|TSSclassifier=strong | |||
|UniProt=P41212 | |UniProt=P41212 | ||
|association_with_transcript=-227bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | |association_with_transcript=-227bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | ||
|cluster_id=chr12:11802547..11802560,+ | |||
|description=CAGE_peak_5_at_ETV6_5end | |description=CAGE_peak_5_at_ETV6_5end | ||
|id=chr12:11802547..11802560,+ | |id=chr12:11802547..11802560,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.75e-25!112;CL:0000049!1.75e-25!112;CL:0002032!7.99e-22!165;CL:0000837!7.99e-22!165;CL:0000037!2.69e-21!172;CL:0000566!2.69e-21!172;CL:0000988!7.62e-21!182;CL:0000766!1.84e-15!76;CL:0000557!6.49e-15!71;CL:0000839!3.53e-14!70;CL:0002009!2.08e-12!65;CL:0002031!6.91e-12!124;CL:0002194!8.25e-12!63;CL:0000576!8.25e-12!63;CL:0000040!8.25e-12!63;CL:0000559!8.25e-12!63;CL:0002057!1.36e-11!42;CL:0000738!1.69e-11!140;CL:0000860!3.45e-10!45;CL:0002087!1.35e-09!119 | |ontology_enrichment_celltype=CL:0000763!1.75e-25!112;CL:0000049!1.75e-25!112;CL:0002032!7.99e-22!165;CL:0000837!7.99e-22!165;CL:0000037!2.69e-21!172;CL:0000566!2.69e-21!172;CL:0000988!7.62e-21!182;CL:0000766!1.84e-15!76;CL:0000557!6.49e-15!71;CL:0000839!3.53e-14!70;CL:0002009!2.08e-12!65;CL:0002031!6.91e-12!124;CL:0002194!8.25e-12!63;CL:0000576!8.25e-12!63;CL:0000040!8.25e-12!63;CL:0000559!8.25e-12!63;CL:0002057!1.36e-11!42;CL:0000738!1.69e-11!140;CL:0000860!3.45e-10!45;CL:0002087!1.35e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.59e-23;33!CL:0002057;5.59e-23;33!CL:0000473;3.76e-17;39!CL:0000234;3.76e-17;39!CL:0000763;4.53e-16;100!CL:0000576;1.07e-12;48!CL:0000766;9.88e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.45e-39,108;CL:0000049,1.45e-39,108;CL:0002032,2.76e-30,161;CL:0000837,2.76e-30,161;CL:0000037,3.02e-29,168;CL:0000988,3.66e-29,177;CL:0000766,8.95e-21,72;CL:0000557,1.10e-20,67;CL:0000860,1.18e-19,42;CL:0002057,1.18e-19,42;CL:0000473,7.64e-19,48;CL:0000234,7.64e-19,48;CL:0000839,2.18e-18,66;CL:0002009,6.36e-18,61;CL:0002194,1.31e-17,59;CL:0000576,1.31e-17,59;CL:0000040,1.31e-17,59;CL:0000559,1.31e-17,59;CL:0002031,4.54e-13,120;CL:0000738,8.42e-13,136;CL:0002087,6.26e-11,115;CL:0000134,1.26e-07,354;CL:0002320,2.14e-07,361;CL:0000219,7.98e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.00e-14;42!CL:0000049;2.11e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!3.25e-12!31;DOID:1240!4.08e-10!39;DOID:2531!5.67e-10!51;DOID:0060083!5.67e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.94e-24;31!DOID:1240;8.14e-16;39!DOID:2531;6.33e-12;51!DOID:0060083;6.33e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.42e-25,31;DOID:1240,4.00e-20,39;DOID:2531,1.52e-18,51;DOID:0060083,1.52e-18,51;DOID:0050686,3.41e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.93e-14!112;UBERON:0002390!1.22e-13!102;UBERON:0003061!1.22e-13!102;UBERON:0002371!3.51e-12!80;UBERON:0001474!7.14e-12!86;UBERON:0004765!2.38e-09!101;UBERON:0001434!2.38e-09!101;UBERON:0002405!8.21e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.36e-19,93;UBERON:0002371,4.23e-18,76;UBERON:0002390,1.40e-17,98;UBERON:0003061,1.40e-17,98;UBERON:0001474,5.89e-17,82;UBERON:0002193,4.04e-16,108;UBERON:0004765,2.48e-14,90;UBERON:0001434,2.28e-12,100;UBERON:0003081,1.10e-07,203;UBERON:0002384,2.72e-07,371 | |||
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|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0.491467873003018,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0.975865597581014,0.738726348460727,0,0.626909442956176,0.286235987131057,0.547497700291537,1.00434111675842,1.29902789771517,1.39571002064908,1.18066171970519,1.57345710739562,0.767658796194425,0.77408061658038,0,0.30120591877825,0.369754010166788,2.09161441566814,3.55423081218554,21.7264325107787,0.553995408531877,1.40381113229099,0.651032612147555,0,1.29557466407592,0.257575567634187,2.03557534291391,1.88937971844405,2.66842467306598,1.85943229524548,2.46700732813095,1.54853185447552,2.58923153089935,1.7931249457037,2.36482229888585,2.41321976515633,1.29096936716765,1.35426486594342,2.07066573496865,3.547779950752,3.37085226667627,3.97909060082173,4.17207735198922,1.91801137739712,0.989553900560148,0.598390972864896,1.70489900213078,2.90209238628584,2.26954089876456,4.9825779919646,3.76872997885115,2.60741459210101,1.3031330682307,4.23779651843358,1.84138817993782,2.53169909952708,0.211255286311942,0,0.628975936525128,0.336985893439485,0,0.48217676009124,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0,0.382273228125229,11.8954195721123,10.6496626966492,12.3790519844286,1.57367816091066,1.17903228824749,0.822405995998037,0,0.32592226663359,0,0,0.557052284425868,0.883817722424512,0.664601683750863,0.541607727530031,0.384273959177026,0,0.986627427622057,0.552700035571697,0.869409257205157,0.444859689486181,0.267540828089713,0,0.339928028092699,1.53288197440768,2.06176467289578,0.253019692019503,0.637130828648193,0,1.90090408889675,0.602300476311091,0.383959833463255,0,0.710331756132051,0,0.604820229674197,0.802320587350522,0.289648807765598,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0,0.661743720148475,0.221729397462564,0.790513071238134,0.196468613246569,0,0,0.324547393654683,0.696518949197069,0.531831842075461,0.953962497221368,0,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0.419499436209906,1.6507082516404,1.46296476575767,1.03366703667732,0.71153252537342,0.66944122552934,0.805658634218294,0,1.46437234528902,0.735326160691737,0,1.07159673940896,0,0.225222960966644,0,0,0.732806975721629,2.63560834872127,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.404132016209064,0.163461903113459,0.605429710579726,0,0,0,0,0,0.469737994575059,0.323745888736263,0.280901613404497,0.204154171254893,0,0,0,0.989067717114227,0.910161361938026,0,0.336672227908132,0.375355559615893,0,0.877955241761676,0.30648779579902,1.05166641234618,0.113432183160021,0.538168907066586,0.213557388818567,0.847727604638247,0,0.206105058476878,0.515281080091258,0.18611685633159,0.843881661206331,0.68205903612839,0.757301322732344,0.0920498986422993,0,0.710019185033229,0.503760491138201,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0.397589304964456,0.69716365721711,0.829288440122964,0.504641701751257,1.45990943630332,0,0,1.38134921352481,0,0,0,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0.590789906681404,0,0,0.514703430895577,0.329250856225877,0,0.100528972411631,0.370353780634118,0.651616610620649,0,0,0,0.939269553886573,0.721832238805369,0,0.380508304469197,0,0,0.738651018262192,1.63802985597466,0.891786973732369,0,0.503946384596579,0.141775097242386,0.0895585227028483,0.581267877027924,0,0.985326475791887,2.81754988842323,2.48793738648926,2.73827911492227,0.88369703398466,0,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0.560655421726804,0,0.8800594298514,0.775630294546667,0,0.845302752556,0.26593811658487,0,0.771622122786426,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.599837947092342,0,0.502257091432126,2.10833939483032,1.4377491329495,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.591092280605782,0.215627574859517,0.641715181398742,1.27047312111232,0,0.773288812777695,0.335032530668698,0,1.49801404789436,5.9832291840805,0.828831026872071,0.24538298343828,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,1.02943027143257,0.206768026122887,0.862856803274467,0.533637789017222,0,0,0.30239029332968,0.496215615637554,0.306923946576125,0,0.128139149255701,1.02341449813341,0.482561763430822,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.483437798366489,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0.902399225814824,0.462092022626489,0,0,1.26661954671451,0,0.510281115829547,0.647747748306418,0,1.08378575017541,0,0.509752546090077,0.831076008928724,0.447749509444357,0.877039506583738,0.784306353074702,0,0.328014645699706,0,0.103041011647722,0.457847324091717,0.247528499761764,0.574265537996172,0,3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| ||
|short_description=p5@ETV6 | |short_description=p5@ETV6 | ||
}} | }} |
Latest revision as of 16:34, 16 September 2015
Short description: | p5@ETV6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ETV6_5end |
Coexpression cluster: | NA |
Association with transcript: | -227bp_to_ENST00000396373, NM_001987, uc001qzz.2_5end |
EntrezGene: | ETV6 |
HGNC: | 3495 |
UniProt: | P41212 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.45e-39 | 108 |
common myeloid progenitor | 1.45e-39 | 108 |
hematopoietic oligopotent progenitor cell | 2.76e-30 | 161 |
hematopoietic multipotent progenitor cell | 2.76e-30 | 161 |
hematopoietic stem cell | 3.02e-29 | 168 |
hematopoietic cell | 3.66e-29 | 177 |
myeloid leukocyte | 8.95e-21 | 72 |
granulocyte monocyte progenitor cell | 1.10e-20 | 67 |
classical monocyte | 1.18e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-19 | 42 |
defensive cell | 7.64e-19 | 48 |
phagocyte | 7.64e-19 | 48 |
myeloid lineage restricted progenitor cell | 2.18e-18 | 66 |
macrophage dendritic cell progenitor | 6.36e-18 | 61 |
monopoietic cell | 1.31e-17 | 59 |
monocyte | 1.31e-17 | 59 |
monoblast | 1.31e-17 | 59 |
promonocyte | 1.31e-17 | 59 |
hematopoietic lineage restricted progenitor cell | 4.54e-13 | 120 |
leukocyte | 8.42e-13 | 136 |
nongranular leukocyte | 6.26e-11 | 115 |
mesenchymal cell | 1.26e-07 | 354 |
connective tissue cell | 2.14e-07 | 361 |
motile cell | 7.98e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.36e-19 | 93 |
bone marrow | 4.23e-18 | 76 |
hematopoietic system | 1.40e-17 | 98 |
blood island | 1.40e-17 | 98 |
bone element | 5.89e-17 | 82 |
hemolymphoid system | 4.04e-16 | 108 |
skeletal element | 2.48e-14 | 90 |
skeletal system | 2.28e-12 | 100 |
lateral plate mesoderm | 1.10e-07 | 203 |
connective tissue | 2.72e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.42e-25 | 31 |
leukemia | 4.00e-20 | 39 |
hematologic cancer | 1.52e-18 | 51 |
immune system cancer | 1.52e-18 | 51 |
organ system cancer | 3.41e-07 | 137 |