FFCP PHASE1:Hg19::chr12:118112251..118112272,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:118112251..118112272,-
|short_description=p12@KSR2
|description=CAGE_peak_12_at_KSR2_5end
|association_with_transcript=-55bp_to_ENST00000302438_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283455 | |EntrezGene=283455 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18610 | |HGNC=18610 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000302438_5end | |||
|cluster_id=chr12:118112251..118112272,- | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_12_at_KSR2_5end | |||
|id=chr12:118112251..118112272,- | |||
|ontology_enrichment_celltype=CL:0002139!6.52e-92!24;CL:0000071!8.83e-70!18;CL:0002546!8.83e-70!18;CL:0000115!2.59e-66!35;CL:0002078!2.10e-51!44;CL:0000213!3.46e-38!57;CL:0000215!3.46e-38!57;CL:1000413!7.94e-36!9;CL:0002543!1.13e-24!6;CL:0002544!1.50e-24!6;CL:0005020!2.75e-23!6;CL:0002138!2.75e-23!6;CL:0005022!2.75e-23!6;CL:0000222!1.71e-19!119;CL:0000076!5.88e-17!62;CL:0002618!2.93e-13!3;CL:0002144!2.12e-12!3;CL:0000708!7.50e-12!3;CL:0000064!1.91e-11!3;CL:0005012!1.91e-11!3;CL:0000067!1.91e-11!3;CL:0002304!1.91e-11!3;CL:0000220!3.55e-11!246;CL:0002321!5.07e-11!248;CL:0002545!3.71e-09!2;CL:0000066!4.81e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.57e-136;24!CL:0000071;1.40e-116;18!CL:0000115;1.85e-80;36!CL:1000413;4.38e-59;9!CL:0002078;3.53e-52;45!CL:0002543;2.26e-50;6!CL:0000213;7.46e-38;58!CL:0000215;7.46e-38;58!CL:0002544;1.38e-35;6!CL:0002618;3.17e-26;3!CL:0002138;3.78e-22;6!CL:0000076;6.09e-20;63!CL:0002144;7.36e-12;3!CL:0000228;2.17e-09;1!CL:0002372;2.17e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.25e-136,24;CL:0000071,1.12e-116,18;CL:0002546,1.12e-116,18;CL:0000115,9.54e-99,36;CL:0002078,2.20e-78,45;CL:0000213,4.08e-60,58;CL:0000215,4.08e-60,58;CL:1000413,3.78e-59,9;CL:0002543,1.91e-50,6;CL:0002544,1.38e-35,6;CL:0000076,1.88e-31,63;CL:0000222,5.74e-30,121;CL:0002618,3.17e-26,3;CL:0005020,4.72e-22,6;CL:0002138,4.72e-22,6;CL:0005022,4.72e-22,6;CL:0002321,5.35e-14,250;CL:0002144,7.78e-12,3;CL:0000066,3.64e-11,253;CL:0000228,2.26e-09,1;CL:0002372,2.26e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002546;1.40e-116;18!CL:0005022;3.78e-22;6!CL:0000222;6.39e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.83e-70!18;UBERON:0004638!8.83e-70!18;UBERON:0004852!8.83e-70!18;UBERON:0000487!1.18e-62!22;UBERON:0006914!1.55e-54!25;UBERON:0003915!7.94e-36!9;UBERON:0004700!7.94e-36!9;UBERON:0001917!7.94e-36!9;UBERON:0002049!2.70e-35!79;UBERON:0007798!2.70e-35!79;UBERON:0000055!2.33e-30!69;UBERON:0004535!2.78e-23!110;UBERON:0001009!1.80e-22!113;UBERON:0001981!8.82e-20!60;UBERON:0007500!8.82e-20!60;UBERON:0004537!8.82e-20!60;UBERON:0006965!8.82e-20!60;UBERON:0001473!2.63e-17!8;UBERON:0004536!2.63e-17!8;UBERON:0006558!2.63e-17!8;UBERON:0001638!3.26e-16!9;UBERON:0003920!3.26e-16!9;UBERON:0004582!3.26e-16!9;UBERON:0002465!1.03e-13!10;UBERON:0004872!8.94e-13!84;UBERON:0001915!2.12e-12!3;UBERON:0001982!2.12e-12!3;UBERON:0003914!3.03e-12!118;UBERON:0000490!7.03e-12!138;UBERON:0003210!7.50e-12!3;UBERON:0001778!1.91e-11!3;UBERON:0001775!1.91e-11!3;UBERON:0000477!4.34e-10!286;UBERON:0000119!6.56e-10!312;UBERON:0005800!3.71e-09!2;UBERON:0001515!3.71e-09!2;UBERON:0000488!1.06e-08!4;UBERON:0004111!2.71e-08!241;UBERON:0002066!4.15e-08!5;UBERON:0000483!7.28e-08!309;UBERON:0001637!9.70e-08!42;UBERON:0003509!9.70e-08!42;UBERON:0004572!9.70e-08!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.40e-116;18!UBERON:0001986;1.40e-116;18!UBERON:0004852;1.40e-116;18!UBERON:0000487;6.28e-95;22!UBERON:0006914;3.12e-83;25!UBERON:0003915;4.38e-59;9!UBERON:0004700;4.38e-59;9!UBERON:0001917;4.38e-59;9!UBERON:0000490;1.39e-56;33!UBERON:0001638;1.74e-33;9!UBERON:0003920;1.74e-33;9!UBERON:0004582;1.74e-33;9!UBERON:0000055;9.80e-26;65!UBERON:0007500;1.36e-23;56!UBERON:0001981;1.36e-23;56!UBERON:0004537;1.36e-23;56!UBERON:0002049;9.91e-18;75!UBERON:0007798;9.91e-18;75!UBERON:0001473;1.11e-16;8!UBERON:0004536;1.11e-16;8!UBERON:0006558;1.11e-16;8!UBERON:0002066;5.47e-16;5!UBERON:0002465;2.15e-13;10!UBERON:0003914;7.50e-13;74!UBERON:0010523;7.36e-12;3!UBERON:0001915;7.36e-12;3!UBERON:0001982;7.36e-12;3!UBERON:0001009;1.01e-11;112!UBERON:0001637;1.51e-11;42!UBERON:0003509;1.51e-11;42!UBERON:0004572;1.51e-11;42!UBERON:0000025;3.86e-10;93!UBERON:0000947;4.36e-10;21!UBERON:0010191;4.36e-10;21!UBERON:0004535;1.15e-09;109!UBERON:0010260;4.08e-09;9!UBERON:0000119;1.19e-07;139!UBERON:0004111;1.39e-07;130!UBERON:0000483;5.35e-07;136!UBERON:0004573;9.03e-07;33!UBERON:0004571;9.03e-07;33 | |||
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| ||
|short_description=p12@KSR2 | |||
}} | }} |
Latest revision as of 16:46, 16 September 2015
Short description: | p12@KSR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KSR2_5end |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | -55bp_to_ENST00000302438_5end |
EntrezGene: | KSR2 |
HGNC: | 18610 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.25e-136 | 24 |
blood vessel endothelial cell | 1.12e-116 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.12e-116 | 18 |
endothelial cell | 9.54e-99 | 36 |
meso-epithelial cell | 2.20e-78 | 45 |
lining cell | 4.08e-60 | 58 |
barrier cell | 4.08e-60 | 58 |
endothelial cell of artery | 3.78e-59 | 9 |
vein endothelial cell | 1.91e-50 | 6 |
aortic endothelial cell | 1.38e-35 | 6 |
squamous epithelial cell | 1.88e-31 | 63 |
mesodermal cell | 5.74e-30 | 121 |
endothelial cell of umbilical vein | 3.17e-26 | 3 |
lymphangioblast | 4.72e-22 | 6 |
endothelial cell of lymphatic vessel | 4.72e-22 | 6 |
vascular lymphangioblast | 4.72e-22 | 6 |
embryonic cell | 5.35e-14 | 250 |
capillary endothelial cell | 7.78e-12 | 3 |
epithelial cell | 3.64e-11 | 253 |
multinucleate cell | 2.26e-09 | 1 |
myotube | 2.26e-09 | 1 |