FFCP PHASE2:Hg19::chr5:161494744..161494768,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2566 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4087 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4087 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5HB82 | ||
|association_with_transcript=-12bp_to_ENST00000414552_5end | |association_with_transcript=-12bp_to_ENST00000414552_5end | ||
|cluster_id=chr5:161494744..161494768,+ | |cluster_id=chr5:161494744..161494768,+ |
Latest revision as of 17:38, 16 September 2015
Short description: | p5@GABRG2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABRG2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -12bp_to_ENST00000414552_5end |
EntrezGene: | GABRG2 |
HGNC: | 4087 |
UniProt: | F5HB82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@GABRG2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 5.70e-129 | 56 |
neural rod | 5.70e-129 | 56 |
future spinal cord | 5.70e-129 | 56 |
neural keel | 5.70e-129 | 56 |
regional part of nervous system | 1.35e-119 | 53 |
regional part of brain | 1.35e-119 | 53 |
brain | 1.93e-103 | 68 |
future brain | 1.93e-103 | 68 |
central nervous system | 1.84e-101 | 81 |
regional part of forebrain | 1.83e-97 | 41 |
Showing 1 to 10 of 99 entries