FFCP PHASE2:Hg19::chr7:14029283..14029311,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2115 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3490 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3490 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9J0B7 | ||
|association_with_transcript=0bp_to_ENST00000405192,ENST00000433547_5end | |association_with_transcript=0bp_to_ENST00000405192,ENST00000433547_5end | ||
|cluster_id=chr7:14029283..14029311,- | |cluster_id=chr7:14029283..14029311,- |
Latest revision as of 18:07, 16 September 2015
Short description: | p1@ETV1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETV1_5end |
Coexpression cluster: | C4660_lung_cerebellum_rhabdomyosarcoma_mesenchymal_Neural_myxofibrosarcoma_Fibroblast |
Association with transcript: | 0bp_to_ENST00000405192, ENST00000433547_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | C9J0B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ETV1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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electrically responsive cell | 5.26e-09 | 61 |
electrically active cell | 5.26e-09 | 61 |
fibroblast | 2.53e-08 | 76 |
muscle precursor cell | 1.08e-07 | 58 |
myoblast | 1.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-07 | 58 |
muscle cell | 1.98e-07 | 55 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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structure with developmental contribution from neural crest | 7.72e-27 | 132 |
central nervous system | 8.45e-24 | 81 |
nervous system | 5.89e-23 | 89 |
cell layer | 2.38e-22 | 309 |
neural plate | 4.81e-22 | 82 |
presumptive neural plate | 4.81e-22 | 82 |
epithelium | 3.31e-21 | 306 |
neural tube | 3.26e-20 | 56 |
neural rod | 3.26e-20 | 56 |
future spinal cord | 3.26e-20 | 56 |
Showing 1 to 10 of 63 entries